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L3_072_000M1_scaffold_474

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_474_1
unknown

Not on your lists

comp(2..343)
DNA (342bp) protein (114aa)

This feature has no annotations

L3_072_000M1_scaffold_474_2
Azospirillum sp. CAG:239, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1136..2869)
DNA (1734bp) protein (578aa)
ftsI; division-specific transpeptidase, penicillin-binding protein (EC:2.4.1.129)
Cell division protein FtsI/penicillin-binding protein 2 n=1 Tax=Azospirillum sp. CAG:239 RepID=R6J428_9PROT
Cell division protein FtsI/penicillin-binding protein 2 {ECO:0000313|EMBL:CDB53494.1}; TaxID=1262705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:239.;"
L3_072_000M1_scaffold_474_3
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

comp(2890..3273)
DNA (384bp) protein (128aa)
Periplasmic protein TonB n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QLS8_9PROT
Periplasmic protein TonB {ECO:0000313|EMBL:CCZ29700.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
Conserved protein of unknown function
L3_072_000M1_scaffold_474_4
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

comp(3298..4215)
DNA (918bp) protein (306aa)
Ribosomal RNA small subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_01007}; EC=2.1.1.199 {ECO:0000256|HAMAP-Rule:MF_01007};; 16S rRNA m(4)C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01007}; rRNA (cytosine-N(4)-)-methyltransferase RsmH {ECO:0000256|HAMAP-Rule:MF_01007}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
Ribosomal RNA small subunit methyltransferase H n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QTK4_9PROT
mraW; S-adenosyl-methyltransferase MraW
L3_072_000M1_scaffold_474_5
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

comp(4215..4682)
DNA (468bp) protein (156aa)
Protein MraZ n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QM35_9PROT
Transcriptional regulator MraZ {ECO:0000256|HAMAP-Rule:MF_01008, ECO:0000256|SAAS:SAAS00217766}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
hypothetical protein
L3_072_000M1_scaffold_474_6
Azospirillum sp. CAG:239, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5018..5770
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Azospirillum sp. CAG:239 RepID=R6IT49_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDB53498.1}; TaxID=1262705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:239.;"
L3_072_000M1_scaffold_474_7
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

6300..7151
DNA (852bp) protein (284aa)
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase {ECO:0000256|HAMAP-Rule:MF_00388, ECO:0000256|SAAS:SAAS00041388}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_00388, ECO:0000256|SAAS:SAAS00041386};; UDP-3-O-acyl-GlcNAc deacetylase {ECO:0000256|HAMAP-Rule:MF_00388}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
lpxC; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (EC:3.5.1.-)
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5R4W6_9PROT
L3_072_000M1_scaffold_474_8
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

7161..7901
DNA (741bp) protein (247aa)
Outer membrane protein assembly factor BamD n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QLS3_9PROT
Outer membrane protein assembly factor BamD {ECO:0000256|HAMAP-Rule:MF_00922}; Flags: Precursor;; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
competence lipoprotein ComL
L3_072_000M1_scaffold_474_9
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

7905..9575
DNA (1671bp) protein (557aa)
DNA repair protein RecN n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QTJ8_9PROT
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
recN; DNA repair protein RecN
L3_072_000M1_scaffold_474_10
Acetobacter sp. CAG:267, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10065..10694)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Acetobacter sp. CAG:267 RepID=R5XZI9_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDA17924.1}; TaxID=1262684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter; environmental samples.;" source="Acetobacter sp. CAG:267.;"
L3_072_000M1_scaffold_474_11
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

10908..12338
DNA (1431bp) protein (477aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
glutamyl-tRNA synthetase (EC:6.1.1.17)
Glutamate--tRNA ligase n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QM31_9PROT
L3_072_000M1_scaffold_474_12
unknown

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12623..13291
DNA (669bp) protein (223aa)

This feature has no annotations

L3_072_000M1_scaffold_474_13
unknown

Not on your lists

comp(13352..14095)
DNA (744bp) protein (248aa)

This feature has no annotations

L3_072_000M1_scaffold_474_14
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

comp(14210..15487)
DNA (1278bp) protein (426aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000256|HAMAP-Rule:MF_00318}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
eno; enolase (EC:4.2.1.11)
Enolase n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QQW3_9PROT
L3_072_000M1_scaffold_474_15
unknown

Not on your lists

15756..16160
DNA (405bp) protein (135aa)

This feature has no annotations

L3_072_000M1_scaffold_474_16
Azospirillum sp. CAG:239, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16289..16741
DNA (453bp) protein (151aa)
Deoxycytidylate deaminase n=1 Tax=Azospirillum sp. CAG:239 RepID=R6J223_9PROT
Deoxycytidylate deaminase {ECO:0000313|EMBL:CDB52719.1}; TaxID=1262705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:239.;"
CMP/dCMP deaminase, zinc-binding protein
L3_072_000M1_scaffold_474_17
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

16887..17513
DNA (627bp) protein (209aa)
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QX72_9PROT
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain {ECO:0000313|EMBL:CCZ31019.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
response regulator
L3_072_000M1_scaffold_474_18
Azospirillum sp. CAG:239, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17564..18025)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Azospirillum sp. CAG:239 RepID=R6J7P0_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDB53856.1}; TaxID=1262705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:239.;"
slyB; outer membrane lipoprotein SlyB
L3_072_000M1_scaffold_474_19
Azospirillum sp. CAG:239, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18180..19568
DNA (1389bp) protein (463aa)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; TaxID=1262705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:239.;"
asnS; asparaginyl-tRNA synthetase AsnS (EC:6.1.1.22)
Asparagine--tRNA ligase n=1 Tax=Azospirillum sp. CAG:239 RepID=R6JUS8_9PROT
L3_072_000M1_scaffold_474_20
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

19578..20150
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5RBG7_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCZ30242.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
L3_072_000M1_scaffold_474_21
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

20241..21137
DNA (897bp) protein (299aa)
RNA polymerase sigma factor n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QNL7_9PROT
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
RNA polymerase sigma factor
L3_072_000M1_scaffold_474_22
unknown

Not on your lists

21165..21362
DNA (198bp) protein (66aa)

This feature has no annotations

L3_072_000M1_scaffold_474_23
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

21381..22238
DNA (858bp) protein (286aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
Release factor glutamine methyltransferase n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QNC0_9PROT
modification methylase HemK
L3_072_000M1_scaffold_474_24
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

22396..22926
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5R6G9_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCZ30246.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
hypothetical protein
L3_072_000M1_scaffold_474_25
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

22955..24103
DNA (1149bp) protein (383aa)
Putative membrane-associated phosphoesterase n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5RBH3_9PROT
Putative membrane-associated phosphoesterase {ECO:0000313|EMBL:CCZ30247.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
Predicted phosphohydrolase
L3_072_000M1_scaffold_474_26
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

24162..26750
DNA (2589bp) protein (863aa)
ATP-dependent chaperone ClpB n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QNM2_9PROT
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
clpB; Chaperone
L3_072_000M1_scaffold_474_27
Acetobacter sp. CAG:267, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26939..27829
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Acetobacter sp. CAG:267 RepID=R5YBT8_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDA18706.1}; TaxID=1262684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter; environmental samples.;" source="Acetobacter sp. CAG:267.;"
L3_072_000M1_scaffold_474_28
unknown

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comp(27830..28228)
DNA (399bp) protein (133aa)

This feature has no annotations

L3_072_000M1_scaffold_474_29
unknown

Not on your lists

comp(28369..28767)
DNA (399bp) protein (133aa)

This feature has no annotations

L3_072_000M1_scaffold_474_30
Azospirillum sp. CAG:239, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28969..30180)
DNA (1212bp) protein (404aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1262705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:239.;"
pgk; phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QVA9_9PROT
Displaying items 1-30 of 42 in total

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