ggKbase home page

L3_072_000M1_scaffold_617

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_617_1
unknown

Not on your lists

139..750
DNA (612bp) protein (204aa)

This feature has no annotations

L3_072_000M1_scaffold_617_2
Azospirillum sp. CAG:239, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(792..1370)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Azospirillum sp. CAG:239 RepID=R6IV50_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDB54228.1}; TaxID=1262705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:239.;"
hypothetical protein
L3_072_000M1_scaffold_617_3
Azospirillum sp. CAG:239, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1372..2151)
DNA (780bp) protein (260aa)
Mce related family protein n=1 Tax=Azospirillum sp. CAG:239 RepID=R6J6B8_9PROT
Mce related family protein {ECO:0000313|EMBL:CDB54229.1}; TaxID=1262705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:239.;"
hypothetical protein
L3_072_000M1_scaffold_617_4
Azospirillum sp. CAG:239, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2153..2908)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Azospirillum sp. CAG:239 RepID=R6IY64_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDB54230.1}; TaxID=1262705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:239.;"
ABC transporter
L3_072_000M1_scaffold_617_5
Azospirillum sp. CAG:239, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2905..4017)
DNA (1113bp) protein (371aa)
Uncharacterized protein n=1 Tax=Azospirillum sp. CAG:239 RepID=R6J8K3_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDB54231.1}; TaxID=1262705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:239.;"
ABC transporter
L3_072_000M1_scaffold_617_6
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

4149..4409
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QW29_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCZ30524.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
L3_072_000M1_scaffold_617_7
Azospirillum sp. CAG:260, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4492..4908
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Azospirillum sp. CAG:260 RepID=R6HP56_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDB39638.1}; TaxID=1262706 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:260.;"
L3_072_000M1_scaffold_617_8
Azospirillum sp. CAG:239, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4964..6586
DNA (1623bp) protein (541aa)
Glucans biosynthesis protein D n=1 Tax=Azospirillum sp. CAG:239 RepID=R6J6C3_9PROT
Glucans biosynthesis protein D {ECO:0000313|EMBL:CDB54234.1}; TaxID=1262705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:239.;"
glucan biosynthesis protein D
L3_072_000M1_scaffold_617_9
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

6574..7020
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QPI8_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCZ30543.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
L3_072_000M1_scaffold_617_10
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

7013..9037
DNA (2025bp) protein (675aa)
Glucosyltransferase MdoH n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5RCJ1_9PROT
Glucosyltransferase MdoH {ECO:0000313|EMBL:CCZ30542.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
mdoH; periplasmic glucan biosynthesis protein
L3_072_000M1_scaffold_617_11
Azospirillum sp. CAG:260, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9048..11423)
DNA (2376bp) protein (792aa)
MscS Mechanosensitive ion channel n=1 Tax=Azospirillum sp. CAG:260 RepID=R6HZM7_9PROT
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:CDB39719.1}; TaxID=1262706 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:260.;"
mechanosensitive ion channel MscS
L3_072_000M1_scaffold_617_12
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

comp(11554..13305)
DNA (1752bp) protein (584aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|SAAS:SAAS00085897};; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
Putative 1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QPS7_9PROT
1-deoxy-D-xylulose-5-phosphate synthase
L3_072_000M1_scaffold_617_13
Acetobacter sp. CAG:267, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13464..14120)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Acetobacter sp. CAG:267 RepID=R5XZJ5_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDA17934.1}; TaxID=1262684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter; environmental samples.;" source="Acetobacter sp. CAG:267.;"
hypothetical protein
L3_072_000M1_scaffold_617_14
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

comp(14281..14526)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5R7C6_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCZ30516.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
L3_072_000M1_scaffold_617_15
unknown

Not on your lists

14622..15188
DNA (567bp) protein (189aa)

This feature has no annotations

L3_072_000M1_scaffold_617_16
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15285..15857
DNA (573bp) protein (191aa)
UPI0003D6759F related cluster n=1 Tax=unknown RepID=UPI0003D6759F
lipoprotein
Lipoprotein {ECO:0000313|EMBL:AIG05230.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
L3_072_000M1_scaffold_617_17
Azotobacter vinelandii, Azotobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15868..16551
DNA (684bp) protein (228aa)
Uncharacterized protein n=3 Tax=Azotobacter vinelandii RepID=M9Y0H4_AZOVI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK22168.1}; TaxID=1283331 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Azotobacter.;" source="Azotobacter vinelandii CA6.;"
L3_072_000M1_scaffold_617_18
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17342..20341
DNA (3000bp) protein (1000aa)
Uncharacterized protein n=1 Tax=Acinetobacter junii CIP 64.5 RepID=N9CCL3_ACIJU
Putative helicase {ECO:0000313|EMBL:KHJ38058.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
adenine-specific DNA methyltransferase
L3_072_000M1_scaffold_617_19
unknown

Not on your lists

20927..21184
DNA (258bp) protein (86aa)

This feature has no annotations

L3_072_000M1_scaffold_617_20
Alteromonas australica, Alteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21271..23484
DNA (2214bp) protein (738aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI000372B037
Uncharacterized protein {ECO:0000313|EMBL:AJP42567.1}; TaxID=589873 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alteromonas.;" source="Alteromonas australica.;"
hypothetical protein
L3_072_000M1_scaffold_617_21
Azospirillum sp. CAG:260, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23481..24080)
DNA (600bp) protein (200aa)
Site-specific recombinase phage integrase family n=1 Tax=Azospirillum sp. CAG:260 RepID=R6HRA0_9PROT
Site-specific recombinase phage integrase family {ECO:0000313|EMBL:CDB40393.1}; TaxID=1262706 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:260.;"
phage integrase family protein
L3_072_000M1_scaffold_617_22
unknown

Not on your lists

24508..25008
DNA (501bp) protein (167aa)

This feature has no annotations

L3_072_000M1_scaffold_617_23
unknown

Not on your lists

25024..25947
DNA (924bp) protein (308aa)

This feature has no annotations

L3_072_000M1_scaffold_617_24
Desulfosporosinus meridiei, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26162..26617
DNA (456bp) protein (152aa)
HTH-type transcriptional regulator y4wC n=1 Tax=Paenibacillus peoriae RepID=UPI00026C6487
transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:AFQ45281.1}; TaxID=768704 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus meridiei (strain ATCC BAA-275 / DSM 13257 / NCIMB; 13706 / S10).;"
L3_072_000M1_scaffold_617_25
unknown

Not on your lists

26900..27076
DNA (177bp) protein (59aa)

This feature has no annotations

L3_072_000M1_scaffold_617_26
GWA1_OD1_36_12, Parcubacteria, Bacteria

Not on your lists

27077..28213
DNA (1137bp) protein (379aa)
Uncharacterized protein {ECO:0000313|EMBL:KKP92822.1}; TaxID=1618782 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_36_12.;"
id=3240324 bin=GWB1_KAZAN_52_7 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWB1_KAZAN_52_7 organism_group=Kazan
L3_072_000M1_scaffold_617_27

Not on your lists

28206..29069
DNA (864bp) protein (288aa)
Cassette chromosome recombinase B n=1 Tax=uncultured bacterium RepID=K2G6F0_9BACT
Cassette chromosome recombinase B {ECO:0000313|EMBL:EKE25639.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
cassette chromosome recombinase B
L3_072_000M1_scaffold_617_28
GWF2_Melainabacteria_37_15_curated, Melainabacteria, Bacteria

Not on your lists

29177..30946
DNA (1770bp) protein (590aa)
Cassette chromosome recombinase B id=3900314 bin=GWF2_Melainabacteria_37_15 species=MEL_C2 genus=MEL_C2 taxon_order=MEL_C2 taxon_class=MEL_C2 phylum=Melainabacteria tax=GWF2_Melainabacteria_37_15 organism_group=Melainabacteria
cassette chromosome recombinase B
Tax=GWF2_Melainabacteria_37_15_curated
L3_072_000M1_scaffold_617_29
unknown

Not on your lists

31043..32032
DNA (990bp) protein (330aa)

This feature has no annotations

L3_072_000M1_scaffold_617_30
Caenispirillum salinarum, Caenispirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32029..32793
DNA (765bp) protein (255aa)
Metal-dependent hydrolase n=1 Tax=Caenispirillum salinarum AK4 RepID=K9H376_9PROT
Metal-dependent hydrolase {ECO:0000313|EMBL:EKV31509.1}; TaxID=1238182 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Caenispirillum.;" source="Caenispirillum salinarum AK4.;"
PhnP protein
Displaying items 1-30 of 37 in total

View Taxonomy