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L3_072_000M1_scaffold_820

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_820_1
unknown

Not on your lists

comp(352..576)
DNA (225bp) protein (75aa)

This feature has no annotations

L3_072_000M1_scaffold_820_2
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

comp(853..1059)
DNA (207bp) protein (69aa)
Cold-shock DNA-binding protein family n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5R8R1_9PROT
Cold-shock DNA-binding protein family {ECO:0000313|EMBL:CCZ31046.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
cspA2; cold shock protein CspA
L3_072_000M1_scaffold_820_3
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

comp(1170..2849)
DNA (1680bp) protein (560aa)
ABC transporter component n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QX82_9PROT
ABC transporter component {ECO:0000313|EMBL:CCZ31049.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
putative ABC transporter ATP-binding protein
L3_072_000M1_scaffold_820_4
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

comp(2927..3505)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5R8R4_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCZ31051.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
L3_072_000M1_scaffold_820_5
Azospirillum sp. CAG:260, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3662..3787
DNA (126bp) protein (42aa)
50S ribosomal protein L36 n=1 Tax=Azospirillum sp. CAG:260 RepID=R6I2U5_9PROT
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=1262706 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:260.;"
rpmJ; ribosomal protein L36
L3_072_000M1_scaffold_820_6
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

comp(3856..4293)
DNA (438bp) protein (146aa)
GCN5-related N-acetyltransferase n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QQR6_9PROT
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:CCZ31045.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
Acetyltransferases
L3_072_000M1_scaffold_820_7
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

4454..6262
DNA (1809bp) protein (603aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
Elongation factor 4 n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QX80_9PROT
lepA; GTP-binding protein
L3_072_000M1_scaffold_820_8
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

6600..7805
DNA (1206bp) protein (402aa)
Phosphopentomutase {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00010015}; EC=5.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00009998};; Phosphodeoxyribomutase {ECO:0000256|HAMAP-Rule:MF_00740}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
phosphopentomutase (EC:5.4.2.7)
Phosphopentomutase n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QQ67_9PROT
L3_072_000M1_scaffold_820_9
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

7802..8560
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5RD79_9PROT
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
polyphenol oxidase
L3_072_000M1_scaffold_820_10
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

8570..9736
DNA (1167bp) protein (389aa)
Heat shock protein DnaJ domain protein n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5R824_9PROT
Heat shock protein DnaJ domain protein {ECO:0000313|EMBL:CCZ30816.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
hypothetical protein
L3_072_000M1_scaffold_820_11
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

9733..10452
DNA (720bp) protein (240aa)
Negative regulator of beta-lactamase expression n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QQ16_9PROT
Negative regulator of beta-lactamase expression {ECO:0000313|EMBL:CCZ30815.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
N-acetylmuramoyl-L-alanine amidase
L3_072_000M1_scaffold_820_12
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

comp(10442..10897)
DNA (456bp) protein (152aa)
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
rufX; Holliday junction resolvase-like protein (EC:3.-.-.-)
Putative Holliday junction resolvase n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QWQ6_9PROT
L3_072_000M1_scaffold_820_13
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

11225..12541
DNA (1317bp) protein (439aa)
Protein TolB n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QQ63_9PROT
Protein TolB {ECO:0000256|HAMAP-Rule:MF_00671}; Flags: Precursor;; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
tolB; translocation protein TolB
L3_072_000M1_scaffold_820_14
unknown

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12784..13260
DNA (477bp) protein (159aa)

This feature has no annotations

L3_072_000M1_scaffold_820_15
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

comp(13327..14637)
DNA (1311bp) protein (437aa)
Thymidine phosphorylase {ECO:0000256|SAAS:SAAS00031984}; EC=2.4.2.4 {ECO:0000256|SAAS:SAAS00031985};; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
Thymidine phosphorylase n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5R819_9PROT
deoA; thymidine phosphorylase
L3_072_000M1_scaffold_820_16
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

comp(14639..15370)
DNA (732bp) protein (244aa)
Deoxyribose-phosphate aldolase {ECO:0000256|SAAS:SAAS00058202}; EC=4.1.2.4 {ECO:0000256|SAAS:SAAS00058202};; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
deoxyribose-phosphate aldolase (EC:4.1.2.4)
Deoxyribose-phosphate aldolase n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QQ10_9PROT
L3_072_000M1_scaffold_820_17
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

comp(15372..16184)
DNA (813bp) protein (271aa)
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
punA; Purine nucleoside phosphorylase (EC:2.4.2.1)
Purine nucleoside phosphorylase n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QWQ2_9PROT
L3_072_000M1_scaffold_820_18
Azospirillum sp. CAG:239, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16187..16576)
DNA (390bp) protein (130aa)
Cytidine deaminase n=1 Tax=Azospirillum sp. CAG:239 RepID=R6JUY9_9PROT
Cytidine deaminase {ECO:0000313|EMBL:CDB53907.1}; TaxID=1262705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:239.;"
cytidine deaminase
L3_072_000M1_scaffold_820_19
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

16694..20827
DNA (4134bp) protein (1378aa)
Uncharacterized protein n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5RD70_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCZ30807.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
hypothetical protein
L3_072_000M1_scaffold_820_20
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

20896..21789
DNA (894bp) protein (298aa)
UTP--glucose-1-phosphate uridylyltransferase n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5R813_9PROT
UTP--glucose-1-phosphate uridylyltransferase {ECO:0000313|EMBL:CCZ30806.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
UTP--glucose-1-phosphate uridylyltransferase
L3_072_000M1_scaffold_820_21
Azospirillum sp. CAG:260, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22519..22740)
DNA (222bp) protein (74aa)
Translation initiation factor IF-1 n=2 Tax=Proteobacteria RepID=R5QQS7_9PROT
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1262706 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:260.;"
hypothetical protein
L3_072_000M1_scaffold_820_22
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

comp(22789..24462)
DNA (1674bp) protein (558aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5R8S1_9PROT
two-component system sensor histidine kinase
L3_072_000M1_scaffold_820_23
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

24546..24764
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5RDW5_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCZ31062.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
L3_072_000M1_scaffold_820_24
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

comp(25052..25501)
DNA (450bp) protein (150aa)
Phosphotransferase system mannitol/fructose-specific IIA domain-containing protein n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QQZ9_9PROT
Phosphotransferase system mannitol/fructose-specific IIA domain-containing protein {ECO:0000313|EMBL:CCZ31063.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
ptsN; phosphotransferase system mannitol/fructose-specific IIA domain-containing protein
L3_072_000M1_scaffold_820_25
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

comp(25531..26088)
DNA (558bp) protein (186aa)
Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QX91_9PROT
Sigma 54 modulation protein/ribosomal protein S30EA {ECO:0000313|EMBL:CCZ31064.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
sigma 54 modulation protein
L3_072_000M1_scaffold_820_26
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

comp(26223..27692)
DNA (1470bp) protein (490aa)
RNA polymerase sigma-54 factor n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QPP1_9PROT
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
Sigma-54 (RpoN)
L3_072_000M1_scaffold_820_27
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

comp(27720..28463)
DNA (744bp) protein (248aa)
ABC transporter ATP-binding protein putative n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QWF6_9PROT
ABC transporter ATP-binding protein putative {ECO:0000313|EMBL:CCZ30689.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
ABC transporter ATP-binding protein
L3_072_000M1_scaffold_820_28
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

comp(28465..29232)
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QPU8_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCZ30688.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
hypothetical protein
L3_072_000M1_scaffold_820_29
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

comp(29229..29906)
DNA (678bp) protein (226aa)
Conserved uncharacterized protein n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5RCV3_9PROT
Conserved uncharacterized protein {ECO:0000313|EMBL:CCZ30687.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
conserved protein of unknown function
L3_072_000M1_scaffold_820_30
Azospirillum sp. CAG:239, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29915..30883)
DNA (969bp) protein (323aa)
kdsD; Arabinose 5-phosphate isomerase (EC:5.3.1.13)
Sugar phosphate Isomerase n=1 Tax=Azospirillum sp. CAG:239 RepID=R6JW31_9PROT
Sugar phosphate Isomerase {ECO:0000313|EMBL:CDB54282.1}; TaxID=1262705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:239.;"
Displaying items 1-30 of 35 in total

View Taxonomy