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L3_072_000M1_scaffold_907

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_907_1
unknown

Not on your lists

comp(2..343)
DNA (342bp) protein (114aa)

This feature has no annotations

L3_072_000M1_scaffold_907_2
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

934..1311
DNA (378bp) protein (126aa)
Ribosome-binding factor A n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5RC67_9PROT
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
rbfA; Ribosome-binding factor A
L3_072_000M1_scaffold_907_3
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

1322..2236
DNA (915bp) protein (305aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
tRNA pseudouridine synthase B (EC:4.2.1.70)
tRNA pseudouridine synthase B n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QP28_9PROT
L3_072_000M1_scaffold_907_4
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists


2252..2521
DNA (270bp) protein (90aa)
30S ribosomal protein S15 n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5RC62_9PROT
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
rpsO; 30S ribosomal protein S15
L3_072_000M1_scaffold_907_5
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

2774..4894
DNA (2121bp) protein (707aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
pnp; polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
Polyribonucleotide nucleotidyltransferase n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QNV4_9PROT
L3_072_000M1_scaffold_907_6
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists


5639..5929
DNA (291bp) protein (97aa)
50S ribosomal protein L25 n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5RC56_9PROT
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01336, ECO:0000256|SAAS:SAAS00147491}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
rplY; 50S ribosomal protein L25
L3_072_000M1_scaffold_907_7
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

6080..6664
DNA (585bp) protein (195aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5R6Z4_9PROT
L3_072_000M1_scaffold_907_8
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

6666..7775
DNA (1110bp) protein (370aa)
Ribosome-binding ATPase YchF n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QNU9_9PROT
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
hypothetical protein
L3_072_000M1_scaffold_907_9
unknown

Not on your lists

7792..7908
DNA (117bp) protein (39aa)

This feature has no annotations

L3_072_000M1_scaffold_907_10
Azospirillum sp. CAG:239, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8000..8467
DNA (468bp) protein (156aa)
tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmL {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=1262705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:239.;"
tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Azospirillum sp. CAG:239 RepID=R6JT95_9PROT
tRNA/rRNA methyltransferase SpoU
L3_072_000M1_scaffold_907_11
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

comp(8504..10282)
DNA (1779bp) protein (593aa)
Uncharacterized protein n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5RC48_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCZ30417.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
L3_072_000M1_scaffold_907_12
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

comp(10357..11073)
DNA (717bp) protein (239aa)
Hydroxyacylglutathione hydrolase {ECO:0000256|SAAS:SAAS00035352}; EC=3.1.2.6 {ECO:0000256|SAAS:SAAS00035352};; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
gloB; hydroxyacylglutathione hydrolase cytoplasmic (EC:3.1.2.6)
Hydroxyacylglutathione hydrolase 2 n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5R6Y9_9PROT
L3_072_000M1_scaffold_907_13
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

comp(11073..12755)
DNA (1683bp) protein (561aa)
Methyl-accepting chemotaxis protein n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QNU3_9PROT
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:CCZ30415.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
HD-GYP domain-containing protein
L3_072_000M1_scaffold_907_14
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

comp(12815..13936)
DNA (1122bp) protein (374aa)
Uncharacterized protein n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QVQ7_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCZ30414.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
hypothetical protein
L3_072_000M1_scaffold_907_15
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

comp(13997..14920)
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QP14_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCZ30413.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
hypothetical protein
L3_072_000M1_scaffold_907_16
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

comp(14930..15475)
DNA (546bp) protein (182aa)
Scaffold protein Nfu/NifU n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5RC43_9PROT
Scaffold protein Nfu/NifU {ECO:0000313|EMBL:CCZ30412.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
hypothetical protein
L3_072_000M1_scaffold_907_17
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

comp(15487..16497)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5R6Y4_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCZ30411.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
conserved protein of unknown function
L3_072_000M1_scaffold_907_18
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

comp(16491..18074)
DNA (1584bp) protein (528aa)
Uncharacterized membrane protein putative virulence factor n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QNT7_9PROT
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
hypothetical protein
L3_072_000M1_scaffold_907_19
unknown

Not on your lists

18257..18619
DNA (363bp) protein (121aa)

This feature has no annotations

L3_072_000M1_scaffold_907_20
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

comp(18742..20595)
DNA (1854bp) protein (618aa)
GTP-binding protein TypA n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5R6X9_9PROT
GTP-binding protein TypA {ECO:0000313|EMBL:CCZ30406.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
typA; GTP-binding protein TypA
L3_072_000M1_scaffold_907_21
unknown

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20866..21183
DNA (318bp) protein (106aa)

This feature has no annotations

L3_072_000M1_scaffold_907_22
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

comp(21241..22272)
DNA (1032bp) protein (344aa)
Sugar kinase n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QVP4_9PROT
Sugar kinase {ECO:0000313|EMBL:CCZ30404.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
sugar kinase
L3_072_000M1_scaffold_907_23
Azospirillum sp. CAG:239, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22397..22636)
DNA (240bp) protein (80aa)
4Fe-4S ferredoxin iron-sulfur binding protein n=1 Tax=Azospirillum sp. CAG:239 RepID=R6JTD5_9PROT
4Fe-4S ferredoxin iron-sulfur binding protein {ECO:0000313|EMBL:CDB53367.1}; TaxID=1262705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:239.;"
ferredoxin A
L3_072_000M1_scaffold_907_24
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

22778..24613
DNA (1836bp) protein (612aa)
Chaperone protein HtpG n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5RC30_9PROT
Chaperone protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505}; Heat shock protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505}; High temperature protein G {ECO:0000256|HAMAP-Rule:MF_00505}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
htpG; Heat shock protein HtpG (High temperature protein G)
L3_072_000M1_scaffold_907_25
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

comp(24648..25025)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QVF2_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCZ30309.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
hypothetical protein
L3_072_000M1_scaffold_907_26
unknown

Not on your lists

comp(25291..25770)
DNA (480bp) protein (160aa)

This feature has no annotations

L3_072_000M1_scaffold_907_27
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

comp(26398..26877)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QNI7_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCZ30315.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
hypothetical protein
L3_072_000M1_scaffold_907_28
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

comp(26989..28632)
DNA (1644bp) protein (548aa)
60 kDa chaperonin n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5R6P0_9PROT
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
groL2; 60 kDa chaperonin 2
L3_072_000M1_scaffold_907_29
Azospirillum sp. CAG:260, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28652..28942)
DNA (291bp) protein (97aa)
10 kDa chaperonin n=1 Tax=Azospirillum sp. CAG:260 RepID=R6HSS1_9PROT
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=1262706 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:260.;"
chaperonin GroS
L3_072_000M1_scaffold_907_30
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

Not on your lists

comp(29084..29851)
DNA (768bp) protein (256aa)
Ion transport protein n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QVG1_9PROT
Ion transport protein {ECO:0000313|EMBL:CCZ30319.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
voltage-gated sodium channel
Displaying items 1-30 of 33 in total

View Taxonomy