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L3_072_000M1_scaffold_3268_13

Organism: dasL3_072_000M1_concoct_80_fa

near complete RP 43 / 55 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: 17218..20691

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.5
  • Coverage: 1156.0
  • Bit_score: 1843
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QNL1_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 78.5
  • Coverage: 1156.0
  • Bit_score: 1843
  • Evalue 0.0
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 51.2
  • Coverage: 1159.0
  • Bit_score: 1187
  • Evalue 0.0

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Taxonomy

Proteobacteria bacterium CAG:495 → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3474
ATGCTACACGATATTAAATATTTGGGCGGTTACACGCTTTCTTCGGTACCTGACGGATATGATTCCTTTCTCGTGGGGCAGTTTGCGCTTTCTTCCCCGCGCAGCATTGTTTATATAGCCAGTGACGGCAATGCTTTGGCGCGTGCCGCCGCCGTTATGGAATATATGTATCCGCAGCTGGAAATCCTGCGTTTTCCGGCATGGGACACGGTTCCGTATGACCGTGTTTCGCCAAACAGCGCGATAATGAGCGAGCGCGTCGAAACCTTGTCCAAACTGGCGCTTAACCCGCAGCCCAAAAAGCCGCGCGTGATTGTGACCAGCGTCGGCGCGGTGTTGCAAAAACTGCCTCCGTCAAAAATTTTTCTTAACTCGTCGCGTGAAGTTTCTATTGGTAATAAACTGGATTTTAACGATTTTCTGCATTATGCGAGTATTAACGGTTATACCCGTGTCGAGCAGGTGATTGAGCAGGGCGAATACGCTGTCCGCGGCGATATTATCGATATATTTCCGGTCGGGCGGACAGAACCGCTGCGTATAGATTTGTTTGACGATGAGATTGAACGCATCCGCACTTTTGATGCTGTCAGCCAGCGCACGACCGGAGAAATAAAATCCTATATGTTTCAGGTCGTCAATGAAGTCATTCTAGACGCCAATACCATAAAGAATTTCCGCTCGGCCTACCGCGAAGCCTTTGGGGCGGCTTTTAACGAAGACGAGATTTACGAGGCTGTTTCCAACGGCAAAAAATACCTGGGTTATGAAAACTGGCTGCCTTTTTTCTACGCCGATGCGCTGCCTTCATTGTTTGACTATCTGCCGGACGCTTATATTATTGCCGGCAAGAATATTGAAGACGCCGCCCGTTCCAAGAGCGAGAGCATCGCCGACTATTATCAGGCGCGGCTTGAGGCTTTGAGCGTCAAATCGGCGGCAGAAATAGATGTCTACCGTCCGGTCAAGCCGGAACTGTTGTATCTGCGCGAAAACGAGTTTAGAGATATTCTTGAACATCGTCAGGCCGTGCATTTGACTAATCTGAGCCTGCCCGAGGCAGAAAAGGTGCATAACTGCGAAGTTCTGCCCGTTCGCAATTTTTCCAGCGCGCATAATGCCGGCGCCGCCAAAGTTTATACCGAGCTTAAAGATTATCTGGCTGAATACGGCAAAGCGAGAAGAATTATCGCCTGTTATTCCGAAGGTTCGCGCGAACGCCTGCTGACCCTCATGAACGAATATGAGATTCCCAATCTCGGCTTTGCCGAAAGCTGGGATGAAGCGCTCGAAAAAGCCAAAAAGAAAATTGTTTTGGTTGTTATGCCCCTGCCGCATGGTTTTAAAACCGCCGATTTGATTGTTATTGCCGAGGCGGATATTCTCGGCGAGCGGCAAAATCAGCGCAAGACCAAAAAAGTCACGTCCAAAGATTTGATTGCCGATATATCGGCGCTGAATGTCGGCGAACTGGTTGTGCATATCGAACACGGCATCGGCCGCTTTATGGGGCTGGAAAACATTACCGCCGGCGGCGCGCCGCATGACTGCCTGAAAATTGTTTATGCCAACGATGCCAAATTGTTTGTTCCGGTCGAAAATATCGATGTCGTGTCGCGCTATGGCATTGAGGACGACAATATTGAGCTGGATACGCTGGGCGGCATGGCCTGGCAGGCCAAAAAGGCCAAAGTCAAACAGCGCATTAAGGACATTGCCGAGAAGCTGATTAAAATCGCCGCCGAGCGGCAGCTCAAAAAGGCCGATTGTTTTGCGCCGCCGCAAGGGTTGTTTGACGACTTCTGTTCGCGTTTTCCGTATAACGAAACCGATGACCAGCTCAATGCGATTGCCGACGTCATGGCTGATTTGAACGCGGCCATACCCATGGACAGGCTGGTCTGCGGCGATGTCGGTTTCGGCAAGACCGAAGTGGCTTTGCGCGCGGCTTTTGCGGTTGCCGCTTCCGGCGCGCAGGTCGCGGTGATTGTGCCAACCACGTTGCTTGCCCGCCAGCATTATCTCAATTTCAAACAGCGGTTGGAAGGCTTCCCGATACGTGTCAAAATGCTTTCCAGGCTGGTAACGCCCAAAGAAGCCGCGCTGACCAAGCAGGGGCTCAGGGATGGTTCGGTCGAAATTGTCATCGGCACGCATTCGCTGCTGTCCAAAGATATTGAATTTTGCAACCTCGGCATGATTATTGTCGACGAGGAGCAGCATTTCGGTGTCGCCCATAAGGAAAAGCTCAAACAGCTCAAGTCTGATGTCCATGTCCTGACGCTCACCGCCACGCCGATACCGCGGACGCTGCAGTTGTCGCTGACCGGAGTCAAACAGCTGAGCATTATCGCCACTCCGCCGGTGGACAGGCTGGCAGCGCGTACTTTTGTCATGCCGTTTGACAAGGTCATGATTAAAGAAGCCATATATCGCGAGAAATTCCGCGGCGGCCAAACCTTTTTCGTTTGTCCGCGGGTGTCGGACATTGCCGGCATGGAACGCGAACTGCGCGTGCTGGTGCCGGATATTAAAATTTTGGTTGCGCACGGCCAGATGCCGGTCAAACAGCTCGAAGACGTTATGACCGATTTTGCTGACGGCAAAGCCGATTTGCTGCTCTCGACAACAATTATAGAATCGGGTATAGATATGCCGACGGTAAACACCATGATTGTTCACCGCGCCGACATGTTCGGGTTGGCGCAGCTGTATCAGCTCAAGGGGCGCGTCGGGCGCGCCAAACTGCGCGGCTACTGCTATTTCACCGTGCCGCCCAAAAAACAGCTAAAACCGATTGCCGAGCGCCGTTTGAGCATTTTACAGGCGCTGGATACGCTGGGAGCAGGCTTCTCTCTGGCCAGTCACGACATGGATATCCGCGGTTCAGGTAACGTTTTGGGCGAGGAGCAGTCGGGGCATATCAAAGAAGTCGGCATTTCGCTGTACCAGCACATGCTGGAGGAAGAAATACTGCGCCTGCGCGCCGGCTCTCTGGATGAACAGAAAGCCAAGCAGCTGGAAGACTGGTCGCCGCAAATTACCACCGGCATTCCGATTATGATTCCCGAAAAATACGTGCGCGATTTGGGCGTCCGTTTGGGGTTATACAAACGTATCGGCGAGCTATCCGATAACGTAGAAATCGCCGATATGCGCGAAGAACTGATAGACCGTTTCGGGCCGTTGCCGGAAGAGGTGGATAATCTTTTGAAAACGGTAGAAATCAAATTGCTGTGCAAAGCCGCCAACATTGACAAGGTTGATGCCGGCGCCAAAGGGATACTCATCAGCCTGCGCAACAATATCTTTGCCAAACCGGACAAATTGATTGAATTCGTCGCCACCCAGTTCGGCGCCGTAAAAATCCGTCCTGACCAAAAACTGTTTATCGAAAAAGATTTGTCGTCTTATAAAATCCGCGTCGAAACCATCCAAAAATACGTCGCCAAAATCCGCAGCTTGCTGCAATAA
PROTEIN sequence
Length: 1158
MLHDIKYLGGYTLSSVPDGYDSFLVGQFALSSPRSIVYIASDGNALARAAAVMEYMYPQLEILRFPAWDTVPYDRVSPNSAIMSERVETLSKLALNPQPKKPRVIVTSVGAVLQKLPPSKIFLNSSREVSIGNKLDFNDFLHYASINGYTRVEQVIEQGEYAVRGDIIDIFPVGRTEPLRIDLFDDEIERIRTFDAVSQRTTGEIKSYMFQVVNEVILDANTIKNFRSAYREAFGAAFNEDEIYEAVSNGKKYLGYENWLPFFYADALPSLFDYLPDAYIIAGKNIEDAARSKSESIADYYQARLEALSVKSAAEIDVYRPVKPELLYLRENEFRDILEHRQAVHLTNLSLPEAEKVHNCEVLPVRNFSSAHNAGAAKVYTELKDYLAEYGKARRIIACYSEGSRERLLTLMNEYEIPNLGFAESWDEALEKAKKKIVLVVMPLPHGFKTADLIVIAEADILGERQNQRKTKKVTSKDLIADISALNVGELVVHIEHGIGRFMGLENITAGGAPHDCLKIVYANDAKLFVPVENIDVVSRYGIEDDNIELDTLGGMAWQAKKAKVKQRIKDIAEKLIKIAAERQLKKADCFAPPQGLFDDFCSRFPYNETDDQLNAIADVMADLNAAIPMDRLVCGDVGFGKTEVALRAAFAVAASGAQVAVIVPTTLLARQHYLNFKQRLEGFPIRVKMLSRLVTPKEAALTKQGLRDGSVEIVIGTHSLLSKDIEFCNLGMIIVDEEQHFGVAHKEKLKQLKSDVHVLTLTATPIPRTLQLSLTGVKQLSIIATPPVDRLAARTFVMPFDKVMIKEAIYREKFRGGQTFFVCPRVSDIAGMERELRVLVPDIKILVAHGQMPVKQLEDVMTDFADGKADLLLSTTIIESGIDMPTVNTMIVHRADMFGLAQLYQLKGRVGRAKLRGYCYFTVPPKKQLKPIAERRLSILQALDTLGAGFSLASHDMDIRGSGNVLGEEQSGHIKEVGISLYQHMLEEEILRLRAGSLDEQKAKQLEDWSPQITTGIPIMIPEKYVRDLGVRLGLYKRIGELSDNVEIADMREELIDRFGPLPEEVDNLLKTVEIKLLCKAANIDKVDAGAKGILISLRNNIFAKPDKLIEFVATQFGAVKIRPDQKLFIEKDLSSYKIRVETIQKYVAKIRSLLQ*