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L3_072_000M1_scaffold_3268

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_3268_1
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

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comp(122..2845)
DNA (2724bp) protein (908aa)
Protein translocase subunit SecA n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5RCU8_9PROT
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
preprotein translocase subunit SecA
L3_072_000M1_scaffold_3268_2
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

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3017..3823
DNA (807bp) protein (269aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
Putative peptidyl-prolyl isomerase (PpiC-like) n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5R7P7_9PROT
putative peptidyl-prolyl isomerase (PpiC-like)
L3_072_000M1_scaffold_3268_3
Azospirillum sp. CAG:239, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3889..4644)
DNA (756bp) protein (252aa)
Phosphatidate cytidylyltransferase n=1 Tax=Azospirillum sp. CAG:239 RepID=R6J1V2_9PROT
Phosphatidate cytidylyltransferase {ECO:0000313|EMBL:CDB52629.1}; TaxID=1262705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:239.;"
phosphatidate cytidylyltransferase
L3_072_000M1_scaffold_3268_4
Azospirillum sp. CAG:239, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4681..6252)
DNA (1572bp) protein (524aa)
Sulfatase n=1 Tax=Azospirillum sp. CAG:239 RepID=R6ITR9_9PROT
Sulfatase {ECO:0000313|EMBL:CDB52675.1}; TaxID=1262705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:239.;"
eptA; putative lipid A phosphoethanolamine transferase
L3_072_000M1_scaffold_3268_5
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

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6419..7027
DNA (609bp) protein (203aa)
Membrane protein MarC family n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QQL9_9PROT
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
membrane protein
L3_072_000M1_scaffold_3268_6
Azospirillum sp. CAG:239, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(7008..7727)
DNA (720bp) protein (240aa)
DNA repair protein RadC n=1 Tax=Azospirillum sp. CAG:239 RepID=R6ISZ4_9PROT
DNA repair protein RadC {ECO:0000313|EMBL:CDB53468.1}; TaxID=1262705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:239.;"
DNA repair protein RadC
L3_072_000M1_scaffold_3268_7
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

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comp(7754..8560)
DNA (807bp) protein (269aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
Methionine aminopeptidase n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QQP3_9PROT
methionine aminopeptidase
L3_072_000M1_scaffold_3268_8
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

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comp(8576..9271)
DNA (696bp) protein (232aa)
Sugar fermentation stimulation protein homolog n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5RDQ3_9PROT
Sugar fermentation stimulation protein homolog {ECO:0000313|EMBL:CCZ30992.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
sugar/maltose fermentation stimulation protein
L3_072_000M1_scaffold_3268_9
Azospirillum sp. CAG:239, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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9433..12060
DNA (2628bp) protein (876aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00036}; TaxID=1262705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum; environmental samples.;" source="Azospirillum sp. CAG:239.;"
Alanine--tRNA ligase n=1 Tax=Azospirillum sp. CAG:239 RepID=R6J411_9PROT
alaS; alanyl-tRNA synthetase
L3_072_000M1_scaffold_3268_10
Acetobacter sp. CAG:267, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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12219..12800
DNA (582bp) protein (194aa)
PEGA domain protein n=1 Tax=Acetobacter sp. CAG:267 RepID=R5YBN3_9PROT
PEGA domain protein {ECO:0000313|EMBL:CDA18631.1}; TaxID=1262684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter; environmental samples.;" source="Acetobacter sp. CAG:267.;"
PEGA domain-containing protein
L3_072_000M1_scaffold_3268_11
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(14055..14987)
DNA (933bp) protein (311aa)
cation diffusion facilitator family transporter n=1 Tax=Thiomicrospira arctica RepID=UPI00036A02A2
Cation efflux system protein {ECO:0000313|EMBL:EDP66803.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199.;"
cation efflux system protein
L3_072_000M1_scaffold_3268_12
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

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comp(15058..17139)
DNA (2082bp) protein (694aa)
recG; DNA helicase, ATP-dependent resolution of Holliday junctions, branch migration (EC:3.6.1.-)
RecG-like helicase n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QV86_9PROT
RecG-like helicase {ECO:0000313|EMBL:CCZ30239.1}; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
L3_072_000M1_scaffold_3268_13
Proteobacteria bacterium CAG:495, Proteobacteria, Bacteria

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17218..20691
DNA (3474bp) protein (1158aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1262987 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:495.;"
Transcription-repair-coupling factor n=1 Tax=Proteobacteria bacterium CAG:495 RepID=R5QNL1_9PROT
transcription-repair coupling factor
L3_072_000M1_scaffold_3268_14
unknown

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comp(20693..21256)
DNA (564bp) protein (188aa)

This feature has no annotations

Displaying 14 items

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