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L3_072_000M1_scaffold_7296

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_7296_1
Ruminococcus sp. SR1/5, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..751
DNA (750bp) protein (250aa)
TRAP transporter, DctM subunit/tripartite ATP-independent periplasmic transporter solute receptor, DctP family n=2 Tax=Ruminococcus RepID=D4LIH3_9FIRM
TRAP transporter, DctM subunit/tripartite ATP-independent periplasmic transporter solute receptor, DctP family
TRAP transporter, DctM subunit/tripartite ATP-independent periplasmic transporter solute receptor, DctP family {ECO:0000313|EMBL:CBL19634.1}; TaxID=657323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. SR1/5.;"
L3_072_000M1_scaffold_7296_2
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(697..1209)
DNA (513bp) protein (171aa)
Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases) n=1 Tax=Eubacterium sp. CAG:202 RepID=R6N1M8_9FIRM
Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases) {ECO:0000313|EMBL:CDC02194.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
L3_072_000M1_scaffold_7296_3
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1314..2333)
DNA (1020bp) protein (340aa)
Putative HTH-type transcriptional repressor PurR n=1 Tax=Clostridium ultunense Esp RepID=M1Z574_9CLOT
Putative HTH-type transcriptional repressor PurR {ECO:0000313|EMBL:CCQ98035.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
LacI family transcriptional regulator
L3_072_000M1_scaffold_7296_4
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2342..4579)
DNA (2238bp) protein (746aa)
Kojibiose phosphorylase (EC:2.4.1.230)
3-O-alpha-D-glucosyl-L-rhamnose phosphorylase; EC=2.4.1.282;; 3-O-alpha-D-glucopyranosyl-L-rhamnopyranose:phosphate beta-D-glucosyltransferase; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
3-O-alpha-D-glucosyl-L-rhamnose phosphorylase n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=3OAGR_CLOPH
L3_072_000M1_scaffold_7296_5
GWF2_Lentisphaerae_52_8_curated, Lentisphaerae, Bacteria

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comp(4573..6120)
DNA (1548bp) protein (516aa)
ADP-ribosylation/Crystallin J1 id=3266602 bin=GWF2_Lentisphaerae_52_8 species=Paenibacillus sp. genus=Paenibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
ADP-ribosylation/crystallin J1
Tax=GWF2_Lentisphaerae_52_8_curated
L3_072_000M1_scaffold_7296_6
RIFOXYB2_FULL_Tenericutes_36_25_curated, Tenericutes, Bacteria

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comp(6132..6455)
DNA (324bp) protein (108aa)
Binding-protein-dependent transport systems inner membrane component id=4193448 bin=GWF2_Tenericutes_35_184 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Tenericutes_35_184 organism_group=Tenericutes organism_desc=a35
binding-protein-dependent transport systems inner membrane component
Tax=RIFOXYB2_FULL_Tenericutes_36_25_curated
L3_072_000M1_scaffold_7296_7
RIFOXYB2_FULL_Tenericutes_36_25_curated, Tenericutes, Bacteria

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comp(6395..6898)
DNA (504bp) protein (168aa)
Binding-protein-dependent transport systems inner membrane component id=4193448 bin=GWF2_Tenericutes_35_184 species=Synechococcus sp. PCC 7502 genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWF2_Tenericutes_35_184 organism_group=Tenericutes organism_desc=a35
Sugar-binding protein of ABC transporter system, permease
Tax=RIFOXYB2_FULL_Tenericutes_36_25_curated
L3_072_000M1_scaffold_7296_8
RIFOXYB2_FULL_Tenericutes_36_25_curated, Tenericutes, Bacteria

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comp(6891..7799)
DNA (909bp) protein (303aa)
Putative ABC transporter permease protein id=2426293 bin=GWF1_Tenericute_35_14 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWF1_Tenericute_35_14 organism_group=Tenericutes
sugar ABC transporter permease
Tax=RIFOXYB2_FULL_Tenericutes_36_25_curated
L3_072_000M1_scaffold_7296_9
RIFOXYB2_FULL_Tenericutes_36_25_curated, Tenericutes, Bacteria

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comp(7853..9223)
DNA (1371bp) protein (457aa)
fructose amino acid-binding lipoprotein id=2426294 bin=GWF1_Tenericute_35_14 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF1_Tenericute_35_14 organism_group=Tenericutes
msmE; ABC transporter extracellular-binding protein yurO
Tax=RIFOXYB2_FULL_Tenericutes_36_25_curated
L3_072_000M1_scaffold_7296_10
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9234..11111)
DNA (1878bp) protein (626aa)
Endopygalactorunase-like protein n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KRK9_CLOPH
endopygalactorunase-like protein
Endopygalactorunase-like protein {ECO:0000313|EMBL:ABX42083.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
L3_072_000M1_scaffold_7296_11
Firmicutes bacterium CAG:475, Firmicutes, Bacteria

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11122..11370
DNA (249bp) protein (83aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1263026 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:475.;"
Transcription termination factor Rho n=1 Tax=Firmicutes bacterium CAG:475 RepID=R7BTK6_9FIRM
transcription termination factor Rho
Displaying 11 items

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