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L3_072_000M1_scaffold_1202

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_1202_1
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..324
DNA (324bp) protein (108aa)
Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases) n=1 Tax=Eubacterium sp. CAG:202 RepID=R6N1M8_9FIRM
Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases) {ECO:0000313|EMBL:CDC02194.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
L3_072_000M1_scaffold_1202_2
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(428..868)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7G5K9_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDE21297.1}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
hypothetical protein
L3_072_000M1_scaffold_1202_3
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1077..1385
DNA (309bp) protein (103aa)
50S ribosomal protein L21 n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7G2E7_9PROT
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
50S ribosomal protein L21
L3_072_000M1_scaffold_1202_4
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1404..1682
DNA (279bp) protein (93aa)
50S ribosomal protein L27 n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7G3K8_9PROT
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
rpmA; 50S ribosomal protein L27
L3_072_000M1_scaffold_1202_5
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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1854..2564
DNA (711bp) protein (237aa)
ABC-type multidrug transport system ATPase component n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7FYF4_9PROT
ABC-type multidrug transport system ATPase component {ECO:0000313|EMBL:CDE19558.1}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
ABC transporter
L3_072_000M1_scaffold_1202_6
Mollicutes bacterium HR1, Mollicutes, Tenericutes, Bacteria

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2657..4543
DNA (1887bp) protein (629aa)
Protein containing MAC/Perforin domain n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6TJU1_9STAP
MAC/Perforin domain protein
MAC/Perforin domain protein {ECO:0000313|EMBL:AIO19576.1}; TaxID=1541959 species="Bacteria; Tenericutes; Mollicutes.;" source="Mollicutes bacterium HR1.;"
L3_072_000M1_scaffold_1202_7
unknown

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4562..5299
DNA (738bp) protein (246aa)

This feature has no annotations

L3_072_000M1_scaffold_1202_8
Faecalibacterium sp. CAG:1138, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5543..6235
DNA (693bp) protein (231aa)
NifU homolog involved in Fe-S cluster formation n=1 Tax=Faecalibacterium sp. CAG:1138 RepID=R5FI32_9FIRM
NifU homolog involved in Fe-S cluster formation {ECO:0000313|EMBL:CCY04680.1}; TaxID=1262896 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:1138.;"
hypothetical protein
L3_072_000M1_scaffold_1202_9
Firmicutes bacterium CAG:475, Firmicutes, Bacteria

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6251..7255
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:475 RepID=R7BUK9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD69485.1}; TaxID=1263026 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:475.;"
hypothetical protein
L3_072_000M1_scaffold_1202_10
Thermobacillus composti, Thermobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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7714..8607
DNA (894bp) protein (298aa)
hypothetical protein n=1 Tax=Paenibacillus terrigena RepID=UPI0003686D0A
DNA-binding domain-containing protein
DNA-binding domain-containing protein, AraC-type {ECO:0000313|EMBL:AGA59797.1}; TaxID=717605 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Thermobacillus.;" source="Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4).;"
L3_072_000M1_scaffold_1202_11
Lactobacillus brevis, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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8884..11217
DNA (2334bp) protein (778aa)
Alpha-L-rhamnosidase N-terminal domain protein n=1 Tax=Lactobacillus brevis subsp. gravesensis ATCC 27305 RepID=C2D2B0_LACBR
Alpha-L-rhamnosidase N-terminal domain protein {ECO:0000313|EMBL:EEI70948.1}; TaxID=525310 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus brevis subsp. gravesensis ATCC 27305.;"
alpha-L-rhamnosidase
L3_072_000M1_scaffold_1202_12
Shuttleworthia sp. MSX8B, Shuttleworthia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11265..12869
DNA (1605bp) protein (535aa)
Extracellular solute-binding protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U923_9RHIZ
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EUB15823.1}; TaxID=936574 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Shuttleworthia.;" source="Shuttleworthia sp. MSX8B.;"
ABC transporter substrate-binding protein
L3_072_000M1_scaffold_1202_13
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12899..16306
DNA (3408bp) protein (1136aa)
Uncharacterized protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MRL9_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF57396.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L3_072_000M1_scaffold_1202_14
Paenibacillus lactis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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16368..18314
DNA (1947bp) protein (649aa)
hypothetical protein n=1 Tax=Paenibacillus daejeonensis RepID=UPI000381E15B
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EHB50650.1}; Flags: Precursor;; TaxID=743719 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus lactis 154.;"
binding-protein-dependent transport systems inner membrane component
L3_072_000M1_scaffold_1202_15
Paenibacillus lactis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18311..19156
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Paenibacillus daejeonensis RepID=UPI00037D1A3C
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EHB50649.1}; TaxID=743719 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus lactis 154.;"
binding-protein-dependent transport systems inner membrane component
L3_072_000M1_scaffold_1202_16
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19169..21028
DNA (1860bp) protein (620aa)
Uncharacterized protein n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7G1W8_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDE19992.1}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
hypothetical protein
L3_072_000M1_scaffold_1202_17
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21110..22792
DNA (1683bp) protein (561aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:448 RepID=R6ST10_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:GAO43093.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
L3_072_000M1_scaffold_1202_18
unknown

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comp(22944..23108)
DNA (165bp) protein (55aa)

This feature has no annotations

L3_072_000M1_scaffold_1202_19
BJP_IG2157_Clostridiales_52_13, Dethiosulfatibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23492..24349
DNA (858bp) protein (286aa)
Tax=BJP_IG2157_Clostridiales_52_13
L3_072_000M1_scaffold_1202_20
Ruminococcus sp. CAG:379, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24427..25284)
DNA (858bp) protein (286aa)
AraC-type DNA-binding domain-containing proteins n=1 Tax=Ruminococcus sp. CAG:379 RepID=R7B0D2_9FIRM
AraC-type DNA-binding domain-containing proteins {ECO:0000313|EMBL:CDD53432.1}; TaxID=1262956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:379.;"
AraC-type DNA-binding domain-containing proteins
L3_072_000M1_scaffold_1202_21
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25531..26520
DNA (990bp) protein (330aa)
Putative HTH-type transcriptional repressor PurR n=1 Tax=Clostridium ultunense Esp RepID=M1Z574_9CLOT
Putative HTH-type transcriptional repressor PurR {ECO:0000313|EMBL:CCQ98035.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
LacI family transcriptional regulator
L3_072_000M1_scaffold_1202_22
unknown

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26617..27132
DNA (516bp) protein (172aa)

This feature has no annotations

L3_072_000M1_scaffold_1202_23
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

27087..27851
DNA (765bp) protein (255aa)
extracellular solute-binding protein
Tax=RBG_16_Chloroflexi_57_11_curated
L3_072_000M1_scaffold_1202_24
Thermoanaerobacterium xylanolyticum, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

27856..28812
DNA (957bp) protein (319aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Thermoanaerobacterium xylanolyticum (strain ATCC 49914 / DSM 7097 / LX-11) RepID=F6BKE3_THEXL
ABC transporter permease
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AEF18090.1}; TaxID=858215 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermoanaerobacterium.;" source="Thermoanaerobacterium xylanolyticum (strain ATCC 49914 / DSM 7097 /; LX-11).;"
L3_072_000M1_scaffold_1202_25
Paenibacillus sp. FSL R5-808, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

28812..29687
DNA (876bp) protein (292aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Paenibacillus vortex V453 RepID=E5YQU7_9BACL
Binding-protein-dependent transporters inner membrane component {ECO:0000313|EMBL:ETT43670.1}; TaxID=1227076 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R5-808.;"
sugar ABC transporter permease
L3_072_000M1_scaffold_1202_26
unknown

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29741..32653
DNA (2913bp) protein (971aa)

This feature has no annotations

L3_072_000M1_scaffold_1202_27
RBG_16_Armatimonadetes_58_9_curated, Armatimonadetes, Bacteria

Not on your lists

32689..34539
DNA (1851bp) protein (617aa)
hypothetical protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B6FCEC
Tax=RBG_16_Armatimonadetes_58_9_curated
L3_072_000M1_scaffold_1202_28
GWF2_Planctomycetes_41_51_curated, Phycisphaerae, Planctomycetes, Bacteria

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34547..36328
DNA (1782bp) protein (594aa)
Alpha-L-rhamnosidase domain protein id=2892269 bin=GWF2_Planctomycete_41_51 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
Tax=GWF2_Planctomycetes_41_51_curated
L3_072_000M1_scaffold_1202_29
Firmicutes bacterium CAG:631, Firmicutes, Bacteria

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comp(36743..37576)
DNA (834bp) protein (278aa)
Restriction endonuclease n=1 Tax=Firmicutes bacterium CAG:631 RepID=R5V9N6_9FIRM
Restriction endonuclease {ECO:0000313|EMBL:CCZ84839.1}; TaxID=1262996 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:631.;"
HNH endonuclease domain-containing protein
Displaying 29 items

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