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L3_072_000M1_scaffold_1508

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_1508_1
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(227..1900)
DNA (1674bp) protein (558aa)
Na/Pi-cotransporter II-like protein n=1 Tax=Clostridium sp. CAG:349 RepID=R6XTX0_9CLOT
Na/Pi-cotransporter II-like protein {ECO:0000313|EMBL:CDD09737.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
na+/Pi-cotransporter family protein
L3_072_000M1_scaffold_1508_2
RBG_13_WOR_2_44_8_curated, WOR-2, Bacteria

Not on your lists

comp(2192..3196)
DNA (1005bp) protein (335aa)
Cell shape determining protein, MreB/Mrl family n=3 Tax=Peptostreptococcus RepID=D3MUC9_9FIRM
MreB/Mrl family cell shape determining protein
Tax=RBG_13_WOR_2_44_8_curated
L3_072_000M1_scaffold_1508_3
Palaeococcus pacificus, Palaeococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(3187..3747)
DNA (561bp) protein (187aa)
Maf-like protein OCC_05369 n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZN32_THELI
hypothetical protein
Maf-like protein PAP_04675 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=1343739 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Palaeococcus.;" source="Palaeococcus pacificus DY20341.;"
L3_072_000M1_scaffold_1508_4
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3787..5313)
DNA (1527bp) protein (509aa)
Exopolyphosphatase putative n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7G1U9_9PROT
Exopolyphosphatase putative {ECO:0000313|EMBL:CDE19967.1}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
Ppx/GppA phosphatase
L3_072_000M1_scaffold_1508_5
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5556..5954)
DNA (399bp) protein (133aa)
Putative permease n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7FZM6_9PROT
Putative permease {ECO:0000313|EMBL:CDE19968.1}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
hypothetical protein
L3_072_000M1_scaffold_1508_6
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5996..6361)
DNA (366bp) protein (122aa)
Putative permease n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7FXI6_9PROT
Putative permease {ECO:0000313|EMBL:CDE19969.1}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
hypothetical protein
L3_072_000M1_scaffold_1508_7
unknown

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6507..9578
DNA (3072bp) protein (1024aa)

This feature has no annotations

L3_072_000M1_scaffold_1508_8
Butyrivibrio crossotus CAG:259, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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9885..10940
DNA (1056bp) protein (352aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082938};; Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase {ECO:0000256|HAMAP-Rule:MF_00033}; TaxID=1263062 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio crossotus CAG:259.;"
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase (EC:2.4.1.227)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=2 Tax=Butyrivibrio RepID=D4S312_9FIRM
L3_072_000M1_scaffold_1508_9
unknown

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comp(10937..11203)
DNA (267bp) protein (89aa)

This feature has no annotations

L3_072_000M1_scaffold_1508_10
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11333..12319
DNA (987bp) protein (329aa)
Transcriptional regulator DeoR family n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7G294_9PROT
Transcriptional regulator DeoR family {ECO:0000313|EMBL:CDE21066.1}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
yobV; hypothetical protein
L3_072_000M1_scaffold_1508_11
Coprobacillus sp. CAG:698, Tenericutes, Bacteria

Not on your lists

12415..14082
DNA (1668bp) protein (556aa)
Hypothetical surface-anchored protein n=1 Tax=Coprobacillus sp. CAG:698 RepID=R5G2Z3_9FIRM
Hypothetical surface-anchored protein {ECO:0000313|EMBL:CCY06856.1}; TaxID=1262856 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:698.;"
hypothetical protein
L3_072_000M1_scaffold_1508_12
Coprobacillus sp. CAG:698, Tenericutes, Bacteria

Not on your lists

14079..15392
DNA (1314bp) protein (438aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. CAG:698 RepID=R5G1N4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY06857.1}; TaxID=1262856 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:698.;"
L3_072_000M1_scaffold_1508_13
Clostridium sp. CAG:448, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15562..16350)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:448 RepID=R6SM93_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC62378.1}; TaxID=1262808 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:448.;"
type IV pilin PilA
L3_072_000M1_scaffold_1508_14
Corallococcus sp. CAG:1435, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16507..17616)
DNA (1110bp) protein (370aa)
Metallo-beta-lactamase n=1 Tax=Corallococcus sp. CAG:1435 RepID=R5VUW3_9DELT
Metallo-beta-lactamase {ECO:0000313|EMBL:CCZ94658.1}; TaxID=1262867 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus; environmental samples.;" source="Corallococcus sp. CAG:1435.;"
ComEC family competence protein
L3_072_000M1_scaffold_1508_15
Clostridium sp. CAG:288, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17609..17989)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:288 RepID=R7FJQ7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE15569.1}; TaxID=1262791 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:288.;"
L3_072_000M1_scaffold_1508_16
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18020..18973)
DNA (954bp) protein (318aa)
Glycerol-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU000439}; EC=1.1.1.94 {ECO:0000256|RuleBase:RU000439};; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
Glycerol-3-phosphate dehydrogenase n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RYL1_9FIRM
NAD-dependent glycerol-3-phosphate dehydrogenase domain-containing protein
L3_072_000M1_scaffold_1508_17
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18970..19563)
DNA (594bp) protein (198aa)
Recombination protein RecR n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7FUL7_9PROT
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
recR; recombination protein RecR
L3_072_000M1_scaffold_1508_18
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19592..19930)
DNA (339bp) protein (113aa)
Nucleoid-associated protein BN767_00545 n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7FU70_9PROT
Nucleoid-associated protein BN767_00545 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
hypothetical protein
L3_072_000M1_scaffold_1508_19
Corallococcus sp. CAG:1435, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19971..21593)
DNA (1623bp) protein (541aa)
DNA polymerase III subunits gamma and tau n=1 Tax=Corallococcus sp. CAG:1435 RepID=R5WQC2_9DELT
DNA polymerase III subunits gamma and tau {ECO:0000313|EMBL:CCZ94707.1}; TaxID=1262867 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus; environmental samples.;" source="Corallococcus sp. CAG:1435.;"
hypothetical protein
L3_072_000M1_scaffold_1508_20
Desmospora sp. 8437, Desmospora, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21599..22183)
DNA (585bp) protein (195aa)
DNA-directed RNA polymerase sigma subunit SigH {ECO:0000313|EMBL:EGK09711.1}; EC=2.7.7.6 {ECO:0000313|EMBL:EGK09711.1};; TaxID=997346 species="Bacteria; Firmicutes; Bacilli; Bacillales; Thermoactinomycetaceae; Desmospora.;" source="Desmospora sp. 8437.;"
DNA-directed RNA polymerase sigma subunit SigH n=1 Tax=Desmospora sp. 8437 RepID=F5SI82_9BACL
ECF subfamily RNA polymerase sigma-24 subunit
L3_072_000M1_scaffold_1508_21
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22173..22886)
DNA (714bp) protein (238aa)
RNA methyltransferase TrmH family group 3 n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7FS83_9PROT
RNA methyltransferase TrmH family group 3 {ECO:0000313|EMBL:CDE18164.1}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
RNA methyltransferase
L3_072_000M1_scaffold_1508_22
unknown

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comp(22883..22978)
DNA (96bp) protein (32aa)

This feature has no annotations

Displaying 22 items

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