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L3_072_000M1_scaffold_22

Search features with annotation key words

Displaying items 1-30 of 132 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_22_1
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..771)
DNA (771bp) protein (257aa)
Kojibiose phosphorylase (EC:2.4.1.230)
3-O-alpha-D-glucosyl-L-rhamnose phosphorylase; EC=2.4.1.282;; 3-O-alpha-D-glucopyranosyl-L-rhamnopyranose:phosphate beta-D-glucosyltransferase; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg); (Lachnoclostridium phytofermentans).;"
3-O-alpha-D-glucosyl-L-rhamnose phosphorylase n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=3OAGR_CLOPH
L3_072_000M1_scaffold_22_2
Geobacillus thermodenitrificans, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

952..2046
DNA (1095bp) protein (365aa)
Regulatory protein GntR HTH n=1 Tax=Geobacillus sp. G11MC16 RepID=B4BM81_9BACI
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:ABO67184.1}; TaxID=420246 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus thermodenitrificans (strain NG80-2).;"
L3_072_000M1_scaffold_22_3
Thermotoga sp. RQ7, Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

comp(2135..5005)
DNA (2871bp) protein (957aa)
Glycoside hydrolase family 2, sugar binding n=1 Tax=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) RepID=B9K9N8_THENN
glycoside hydrolase
Glycoside hydrolase {ECO:0000313|EMBL:AJG41568.1}; TaxID=126738 species="Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga.;" source="Thermotoga sp. RQ7.;"
L3_072_000M1_scaffold_22_4
Anabaena cylindrica, Anabaena, Nostocales, Cyanobacteria, Bacteria

Not on your lists

5257..5907
DNA (651bp) protein (217aa)
Lipase class 3 n=1 Tax=Anabaena cylindrica (strain ATCC 27899 / PCC 7122) RepID=K9ZAZ3_ANACC
lipase class 3
Lipase class 3 {ECO:0000313|EMBL:AFZ56346.1}; TaxID=272123 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Anabaena.;" source="Anabaena cylindrica (strain ATCC 27899 / PCC 7122).;"
L3_072_000M1_scaffold_22_5
Clostridium sp. ASF356, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6224..6373)
DNA (150bp) protein (50aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF356 RepID=N1ZDJ5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ13911.1}; TaxID=97138 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF356.;"
L3_072_000M1_scaffold_22_6
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6504..7871)
DNA (1368bp) protein (456aa)
Uncharacterized protein n=5 Tax=Bacillus cereus group RepID=C2U1I8_BACCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EJQ86063.1}; TaxID=1053212 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus HuB5-5.;"
L3_072_000M1_scaffold_22_7
Desulfosporosinus orientis, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8126..8968)
DNA (843bp) protein (281aa)
Aldo/keto reductase, diketogulonate reductase n=1 Tax=Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 / VKM B-1628) RepID=G7W8N3_DESOD
aldo/keto reductase, diketogulonate reductase
Aldo/keto reductase, diketogulonate reductase {ECO:0000313|EMBL:AET67460.1}; TaxID=768706 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus orientis (strain ATCC 19365 / DSM 765 / NCIMB 8382 /; VKM B-1628) (Desulfotomaculum orientis).;"
L3_072_000M1_scaffold_22_8
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9006..9494)
DNA (489bp) protein (163aa)
Flavodoxin n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EF79_9CLOT
Flavodoxin {ECO:0000313|EMBL:EEG29882.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
flavodoxin
L3_072_000M1_scaffold_22_9
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

comp(9507..10247)
DNA (741bp) protein (247aa)
Cupin domain protein n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6HYQ0_9FIRM
Cupin domain protein {ECO:0000313|EMBL:CDB30932.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
gamma-carboxymuconolactone decarboxylase
L3_072_000M1_scaffold_22_10
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10414..11796)
DNA (1383bp) protein (461aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6C6X0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA61152.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
putative efflux protein, MATE family
L3_072_000M1_scaffold_22_11
Halothermothrix orenii, Halothermothrix, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11951..14251)
DNA (2301bp) protein (767aa)
Kojibiose phosphorylase (EC:2.4.1.230)
Kojibiose phosphorylase {ECO:0000313|EMBL:ACL70205.1}; EC=2.4.1.230 {ECO:0000313|EMBL:ACL70205.1};; TaxID=373903 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halothermothrix.;" source="Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562).;"
Kojibiose phosphorylase n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8CY36_HALOH
L3_072_000M1_scaffold_22_12
Bacteroides sp. CAG:462, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14253..16226)
DNA (1974bp) protein (658aa)
Glycoside hydrolase family 78 n=1 Tax=Bacteroides sp. CAG:462 RepID=R7D325_9BACE
Glycoside hydrolase family 78 {ECO:0000313|EMBL:CDD84646.1}; TaxID=1262740 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:462.;"
glycogen debranching protein
L3_072_000M1_scaffold_22_13
unknown

Not on your lists

comp(16223..20365)
DNA (4143bp) protein (1381aa)

This feature has no annotations

L3_072_000M1_scaffold_22_14
GWF2_Planctomycetes_41_51_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(20389..22224)
DNA (1836bp) protein (612aa)
Alpha-L-rhamnosidase domain protein id=2892269 bin=GWF2_Planctomycete_41_51 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
hypothetical protein
Tax=GWF2_Planctomycetes_41_51_curated
L3_072_000M1_scaffold_22_15
unknown

Not on your lists

comp(22217..25000)
DNA (2784bp) protein (928aa)

This feature has no annotations

L3_072_000M1_scaffold_22_16
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25030..25902)
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7K5I7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN42878.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
ABC transporter permease
L3_072_000M1_scaffold_22_17
Paenibacillus sp. Y412MC10, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25907..26851)
DNA (945bp) protein (315aa)
spermidine/putrescine ABC transporter permease n=1 Tax=Paenibacillus sanguinis RepID=UPI00035C5040
binding-protein-dependent transport systems inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACX64860.1}; TaxID=481743 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Geobacillus sp. (strain Y412MC10).;"
L3_072_000M1_scaffold_22_18
Thermoanaerobacterium xylanolyticum, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26852..28153)
DNA (1302bp) protein (434aa)
Extracellular solute-binding protein family 1 n=1 Tax=Thermoanaerobacterium xylanolyticum (strain ATCC 49914 / DSM 7097 / LX-11) RepID=F6BKE4_THEXL
ABC transporter substrate-binding protein
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:AEF18091.1}; Flags: Precursor;; TaxID=858215 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Thermoanaerobacterium.;" source="Thermoanaerobacterium xylanolyticum (strain ATCC 49914 / DSM 7097 /; LX-11).;"
L3_072_000M1_scaffold_22_19
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28179..31418)
DNA (3240bp) protein (1080aa)
F5/8 type C domain protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EI50_9CLOT
F5/8 type C domain protein {ECO:0000313|EMBL:EEG28858.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
LPXTG-motif cell wall anchor domain-containing protein
L3_072_000M1_scaffold_22_20
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31432..35022)
DNA (3591bp) protein (1197aa)
F5/8 type C domain protein n=1 Tax=Ruminococcus torques ATCC 27756 RepID=A5KME8_9FIRM
F5/8 type C domain protein {ECO:0000313|EMBL:EDK24364.1}; TaxID=411460 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques ATCC 27756.;"
LPXTG cell wall anchor domain protein
L3_072_000M1_scaffold_22_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35328..36221
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z220_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ33710.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
AraC family transcriptional regulator
L3_072_000M1_scaffold_22_22
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(36830..38062)
DNA (1233bp) protein (411aa)
Dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7FZ87_9PROT
Dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein {ECO:0000313|EMBL:CDE19991.1}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
hypothetical protein
L3_072_000M1_scaffold_22_23
unknown

Not on your lists

comp(38059..38934)
DNA (876bp) protein (292aa)

This feature has no annotations

L3_072_000M1_scaffold_22_24
unknown

Not on your lists

comp(38918..39532)
DNA (615bp) protein (205aa)

This feature has no annotations

L3_072_000M1_scaffold_22_25
Paenibacillus lactis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(39546..40394)
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Paenibacillus daejeonensis RepID=UPI00037D1A3C
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EHB50649.1}; TaxID=743719 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus lactis 154.;"
binding-protein-dependent transport systems inner membrane component
L3_072_000M1_scaffold_22_26
Paenibacillus sp. HGF5, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(40407..42380)
DNA (1974bp) protein (658aa)
ABC transporter, permease protein n=1 Tax=Paenibacillus sp. HGF5 RepID=F3MEG8_9BACL
ABC transporter, permease protein {ECO:0000313|EMBL:EGG34215.1}; TaxID=908341 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. HGF5.;"
binding-protein-dependent transport systems inner membrane component
L3_072_000M1_scaffold_22_27
Paenibacillus sp. HGF5, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(42383..43948)
DNA (1566bp) protein (522aa)
ABC transporter, solute-binding protein n=1 Tax=Paenibacillus sp. HGF5 RepID=F3MEG9_9BACL
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EGG34274.1}; TaxID=908341 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. HGF5.;"
family 1 extracellular solute-binding protein
L3_072_000M1_scaffold_22_28
Thermoanaerobacter italicus, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(44007..46073)
DNA (2067bp) protein (689aa)
Pectate disaccharide-lyase (EC:4.2.2.9)
Pectate disaccharide-lyase {ECO:0000313|EMBL:ADD02972.1}; EC=4.2.2.9 {ECO:0000313|EMBL:ADD02972.1};; TaxID=580331 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter italicus (strain DSM 9252 / Ab9).;"
Pectate disaccharide-lyase n=1 Tax=Thermoanaerobacter italicus (strain DSM 9252 / Ab9) RepID=D3T420_THEIA
L3_072_000M1_scaffold_22_29
unknown

Not on your lists

comp(46099..47331)
DNA (1233bp) protein (411aa)

This feature has no annotations

L3_072_000M1_scaffold_22_30
Paenibacillus sp. JDR-2, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(47328..49595)
DNA (2268bp) protein (756aa)
Alpha-L-rhamnosidase n=1 Tax=Paenibacillus sp. (strain JDR-2) RepID=C6CS28_PAESJ
alpha-L-rhamnosidase
Alpha-L-rhamnosidase {ECO:0000313|EMBL:ACS98977.1}; TaxID=324057 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. (strain JDR-2).;"
Displaying items 1-30 of 132 in total

View Taxonomy