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L3_072_000M1_scaffold_512

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_512_1
Clostridium sp. CAG:510, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..633
DNA (633bp) protein (211aa)
Sodium extrusion ABC transporter ATP-binding protein NatA n=1 Tax=Clostridium sp. CAG:510 RepID=R6C7P3_9CLOT
Sodium extrusion ABC transporter ATP-binding protein NatA {ECO:0000313|EMBL:CDA67446.1}; TaxID=1262816 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:510.;"
ABC-type multidrug transport system, ATPase component
L3_072_000M1_scaffold_512_2
Clostridium sp. CAG:510, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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630..1793
DNA (1164bp) protein (388aa)
ABC-2 type transporter n=1 Tax=Clostridium sp. CAG:510 RepID=R6BW45_9CLOT
ABC-2 type transporter {ECO:0000313|EMBL:CDA67445.1}; TaxID=1262816 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:510.;"
ABC-2 type transporter.
L3_072_000M1_scaffold_512_3
Firmicutes bacterium CAG:94, Firmicutes, Bacteria

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2046..2681
DNA (636bp) protein (212aa)
Putative methyltransferase n=1 Tax=Firmicutes bacterium CAG:94 RepID=R6Y3G8_9FIRM
Putative methyltransferase {ECO:0000313|EMBL:CDD28405.1}; TaxID=1262989 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:94.;"
methyltransferase small
L3_072_000M1_scaffold_512_4
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

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2678..2980
DNA (303bp) protein (101aa)
Putative SAM-dependent methyltransferase n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LT95_CLOCD
putative SAM-dependent methyltransferase
Tax=BJP_IG2069_Clostridiales_48_15
L3_072_000M1_scaffold_512_5
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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2991..3749
DNA (759bp) protein (253aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=2 Tax=Oscillibacter RepID=U2SGH9_9FIRM
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:ERK61867.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
putative oxidoreductase
L3_072_000M1_scaffold_512_6
Ruminococcus flavefaciens, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3823..4773
DNA (951bp) protein (317aa)
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00488}; Short=L-LDH {ECO:0000256|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000256|HAMAP-Rule:MF_00488};; TaxID=1341157 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus flavefaciens 007c.;"
lactate dehydrogenase n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C37D5A
ldh; L-lactate dehydrogenase
L3_072_000M1_scaffold_512_7
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4902..6230
DNA (1329bp) protein (443aa)
Bleomycin hydrolase (EC:3.4.22.40)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6CW23_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA76999.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
L3_072_000M1_scaffold_512_8
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6246..6854
DNA (609bp) protein (203aa)
Transferase hexapeptide repeat containing protein n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R6R6_CLOSW
transferase hexapeptide repeat containing protein
Transferase hexapeptide repeat containing protein {ECO:0000313|EMBL:ADL03572.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_072_000M1_scaffold_512_9
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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6920..8104
DNA (1185bp) protein (395aa)
hypothetical protein n=1 Tax=Streptomyces sp. R1-NS-10 RepID=UPI00035FDB07
Beta-lactamase class C and other penicillin binding protein {ECO:0000313|EMBL:EYF04633.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
beta-lactamase
L3_072_000M1_scaffold_512_10
Ruminococcus sp. CAG:488, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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8106..8840
DNA (735bp) protein (245aa)
Putative polysaccharide deacetylase n=1 Tax=Ruminococcus sp. CAG:488 RepID=R5Y231_9FIRM
Putative polysaccharide deacetylase {ECO:0000313|EMBL:CDA18864.1}; TaxID=1262959 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:488.;"
Predicted xylanase/chitin deacetylase
L3_072_000M1_scaffold_512_11
Corallococcus sp. CAG:1435, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8833..9663
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Corallococcus sp. CAG:1435 RepID=R5VWM6_9DELT
Uncharacterized protein {ECO:0000313|EMBL:CCZ95293.1}; TaxID=1262867 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus; environmental samples.;" source="Corallococcus sp. CAG:1435.;"
hypothetical protein
L3_072_000M1_scaffold_512_12
Subdoligranulum sp. CAG:314, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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9676..12081
DNA (2406bp) protein (802aa)
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II (EC:6.2.1.3)
AMP-dependent synthetase and ligase n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K7V2_9FIRM
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:CDE71122.1}; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="Subdoligranulum sp. CAG:314.;"
L3_072_000M1_scaffold_512_13
Lachnospiraceae bacterium COE1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12366..12941)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium COE1 RepID=R9JZS8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS39720.1}; TaxID=1235793 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium COE1.;"
hypothetical protein
L3_072_000M1_scaffold_512_14
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13530..14741
DNA (1212bp) protein (404aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
tyrS; tyrosyl-tRNA ligasee (EC:6.1.1.1)
Tyrosine--tRNA ligase n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7FUC1_9PROT
L3_072_000M1_scaffold_512_15
Enterococcus dispar, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14738..15385
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Enterococcus dispar ATCC 51266 RepID=S0KM85_9ENTE
Uncharacterized protein {ECO:0000313|EMBL:EOT41143.1}; TaxID=1139219 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus dispar ATCC 51266.;"
hypothetical protein
L3_072_000M1_scaffold_512_16
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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15373..15999
DNA (627bp) protein (209aa)
Regulatory protein RecX n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7G432_9PROT
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
recX family protein
L3_072_000M1_scaffold_512_17
Firmicutes bacterium CAG:631, Firmicutes, Bacteria

Not on your lists

15984..17447
DNA (1464bp) protein (488aa)
hypothetical protein n=1 Tax=Lachnospiraceae bacterium NK4A179 RepID=UPI0003B338D1
Uncharacterized protein {ECO:0000313|EMBL:CCZ86050.1}; TaxID=1262996 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:631.;"
carbohydrate kinase, YjeF-like protein
L3_072_000M1_scaffold_512_18
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17444..18634
DNA (1191bp) protein (397aa)
aspartate aminotransferase (EC:2.6.1.1)
Pyridoxal-phosphate-dependent aminotransferase family n=5 Tax=Clostridium botulinum RepID=A7FSR1_CLOB1
Putative aspartate aminotransferase {ECO:0000313|EMBL:ABS40484.1}; TaxID=441772 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Langeland / NCTC 10281 / Type F).;"
L3_072_000M1_scaffold_512_19
unknown

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comp(18744..19094)
DNA (351bp) protein (117aa)

This feature has no annotations

L3_072_000M1_scaffold_512_20
Corallococcus sp. CAG:1435, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19210..19854
DNA (645bp) protein (215aa)
tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; EC=2.1.1.33 {ECO:0000256|HAMAP-Rule:MF_01057};; tRNA (guanine(46)-N(7))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; tRNA(m7G46)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01057}; TaxID=1262867 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus; environmental samples.;" source="Corallococcus sp. CAG:1435.;"
tRNA (guanine-N(7)-)-methyltransferase n=1 Tax=Corallococcus sp. CAG:1435 RepID=R5WSH9_9DELT
tRNA (guanine-N(7)-)-methyltransferase
L3_072_000M1_scaffold_512_21
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19934..20299
DNA (366bp) protein (122aa)
Ferric uptake regulator Fur family n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HVJ7_9FIRM
Ferric uptake regulator Fur family {ECO:0000313|EMBL:CDB41005.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
FUR family transcriptional regulator
L3_072_000M1_scaffold_512_22
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20333..20881
DNA (549bp) protein (183aa)
Rubredoxin n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NRM1_9FIRM
Rubredoxin {ECO:0000313|EMBL:EDN01281.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillosus ATCC 29799.;"
Rubrerythrin
L3_072_000M1_scaffold_512_23
unknown

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comp(20889..21002)
DNA (114bp) protein (38aa)

This feature has no annotations

L3_072_000M1_scaffold_512_24
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21322..22479)
DNA (1158bp) protein (386aa)
phosphoglycerate dehydrogenase (EC:1.1.1.95)
4-phosphoerythronate dehydrogenase n=1 Tax=Eubacterium sp. CAG:180 RepID=R5N546_9FIRM
4-phosphoerythronate dehydrogenase {ECO:0000313|EMBL:CCY92701.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
L3_072_000M1_scaffold_512_25
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22476..23561)
DNA (1086bp) protein (362aa)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160, ECO:0000256|RuleBase:RU004505}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160, ECO:0000256|RuleBase:RU004505};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
serC; phosphoserine aminotransferase SerC (EC:2.6.1.52)
Phosphoserine aminotransferase n=1 Tax=Clostridium sp. CAG:349 RepID=R6WQM5_9CLOT
L3_072_000M1_scaffold_512_26
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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23749..25401
DNA (1653bp) protein (551aa)
RNA-metabolising metallo-beta-lactamase n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7G4T8_9PROT
RNA-metabolising metallo-beta-lactamase {ECO:0000313|EMBL:CDE21042.1}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
RNA-metabolising metallo-beta-lactamase
L3_072_000M1_scaffold_512_27
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25398..25988
DNA (591bp) protein (197aa)
O-methyltransferase family 3 n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7G271_9PROT
O-methyltransferase family 3 {ECO:0000313|EMBL:CDE21041.1}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
O-methyltransferase family protein
L3_072_000M1_scaffold_512_28
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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25985..27211
DNA (1227bp) protein (409aa)
Peptidase U32 n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7G1K0_9PROT
Peptidase U32 {ECO:0000313|EMBL:CDE21040.1}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
peptidase U32
L3_072_000M1_scaffold_512_29
Streptococcus sanguinis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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27217..27777
DNA (561bp) protein (187aa)
Uncharacterized protein n=3 Tax=Streptococcus sanguinis RepID=F3UI11_STRSA
Uncharacterized protein {ECO:0000313|EMBL:EGQ20549.1}; TaxID=997356 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus sanguinis ATCC 29667.;"
hypothetical protein
L3_072_000M1_scaffold_512_30
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27933..28445)
DNA (513bp) protein (171aa)
Acetyltransferase, GNAT family n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PU49_9CLOT
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:EET87249.1}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidivorans P7.;"
N-acetyltransferase GCN5
Displaying items 1-30 of 47 in total

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