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L3_072_000M1_scaffold_729

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_729_1
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..1577)
DNA (1575bp) protein (525aa)
LPXTG-motif cell wall anchor domain protein n=1 Tax=Clostridium leptum CAG:27 RepID=R6N625_9CLOT
LPXTG-motif cell wall anchor domain protein {ECO:0000313|EMBL:CDC03824.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium leptum CAG:27.;"
calcineurin-like phosphoesterase
L3_072_000M1_scaffold_729_2
Paenibacillus sp. JDR-2, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1601..3283)
DNA (1683bp) protein (561aa)
Extracellular solute-binding protein family 1 n=1 Tax=Paenibacillus sp. (strain JDR-2) RepID=C6CVX5_PAESJ
extracellular solute-binding protein
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:ACS99839.1}; Flags: Precursor;; TaxID=324057 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. (strain JDR-2).;"
L3_072_000M1_scaffold_729_3
Paenibacillus sp. FSL H7-0737, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(3299..4171)
DNA (873bp) protein (291aa)
Protein LplC n=1 Tax=Paenibacillus sp. HGF5 RepID=F3M4G7_9BACL
ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:AIQ24481.1}; TaxID=1536775 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL H7-0737.;"
L3_072_000M1_scaffold_729_4
Paenibacillus sp. JDR-2, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(4182..5162)
DNA (981bp) protein (327aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Paenibacillus sp. (strain JDR-2) RepID=C6CVX3_PAESJ
binding-protein-dependent transport system inner membrane protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACS99837.1}; TaxID=324057 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. (strain JDR-2).;"
L3_072_000M1_scaffold_729_5
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5246..6172
DNA (927bp) protein (309aa)
Transcriptional regulator, AraC family n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2RJ39_9FIRM
Transcriptional regulator, AraC family {ECO:0000313|EMBL:AJG98219.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridium MP).;"
hypothetical protein
L3_072_000M1_scaffold_729_6
Acidaminococcus sp. CAG:917, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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6340..7017
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Acidaminococcus sp. CAG:917 RepID=R7KCP5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE72727.1}; TaxID=1262688 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus; environmental samples.;" source="Acidaminococcus sp. CAG:917.;"
yjbR family protein
L3_072_000M1_scaffold_729_7
RIFOXYC12_FULL_Lentisphaerae_60_16_curated, Lentisphaerae, Bacteria

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comp(7164..9050)
DNA (1887bp) protein (629aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002D82FE6
Alpha-galactosidase
Tax=RIFOXYC12_FULL_Lentisphaerae_60_16_curated
L3_072_000M1_scaffold_729_8
Treponema caldarium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(9062..10057)
DNA (996bp) protein (332aa)
Transcriptional regulator, LacI family n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8EYT6_SPICH
LacI family transcriptional regulator
Transcriptional regulator, LacI family {ECO:0000313|EMBL:AEJ18882.1}; TaxID=744872 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema caldarium (strain ATCC 51460 / DSM 7334 / H1) (Spirochaeta; caldaria).;"
L3_072_000M1_scaffold_729_9
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10129..11988)
DNA (1860bp) protein (620aa)
Uncharacterized protein n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7G1W8_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDE19992.1}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
hypothetical protein
L3_072_000M1_scaffold_729_10
unknown

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comp(12022..13779)
DNA (1758bp) protein (586aa)

This feature has no annotations

L3_072_000M1_scaffold_729_11
Paenibacillus lactis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(13802..14623)
DNA (822bp) protein (274aa)
hypothetical protein n=1 Tax=Paenibacillus daejeonensis RepID=UPI00037D1A3C
binding-protein-dependent transport systems inner membrane component
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EHB50649.1}; TaxID=743719 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus lactis 154.;"
L3_072_000M1_scaffold_729_12
Paenibacillus lactis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14690..16723)
DNA (2034bp) protein (678aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Paenibacillus lactis 154 RepID=G4HNB9_9BACL
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EHB50650.1}; Flags: Precursor;; TaxID=743719 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus lactis 154.;"
binding-protein-dependent transport systems inner membrane component
L3_072_000M1_scaffold_729_13
unknown

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comp(16845..20144)
DNA (3300bp) protein (1100aa)

This feature has no annotations

L3_072_000M1_scaffold_729_14
unknown

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20425..21330
DNA (906bp) protein (302aa)

This feature has no annotations

L3_072_000M1_scaffold_729_15
unknown

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comp(21490..22422)
DNA (933bp) protein (311aa)

This feature has no annotations

L3_072_000M1_scaffold_729_16
GWE2_Tenericutes_38_8_curated, Tenericutes, Bacteria

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comp(22562..23455)
DNA (894bp) protein (298aa)
Putative uncharacterized protein id=4702873 bin=GWA2_Tenericute_38_26 species=Coprococcus catus genus=Coprococcus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Tenericute_38_26 organism_group=Tenericutes organism_desc=Closest isolate is 1.5 Mb genome
Tax=GWE2_Tenericutes_38_8_curated
L3_072_000M1_scaffold_729_17
Youngiibacter fragilis, Youngiibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23466..29096)
DNA (5631bp) protein (1877aa)
Uncharacterized protein n=1 Tax=Youngiibacter fragilis 232.1 RepID=V7I2S7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ETA79576.1}; TaxID=994573 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Youngiibacter.;" source="Youngiibacter fragilis 232.1.;"
Protein of unknown function (DUF3320).
L3_072_000M1_scaffold_729_18
Subdoligranulum sp. CAG:314, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29603..30199
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K4N9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE70846.1}; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="Subdoligranulum sp. CAG:314.;"
hypothetical protein
L3_072_000M1_scaffold_729_19
Cylindrospermum stagnale, Cylindrospermum, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(31150..31707)
DNA (558bp) protein (186aa)
Putative ATPase n=1 Tax=Cylindrospermum stagnale PCC 7417 RepID=K9WSI1_9NOST
putative ATPase
Putative ATPase {ECO:0000313|EMBL:AFZ22497.1}; TaxID=56107 species="Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Cylindrospermum.;" source="Cylindrospermum stagnale PCC 7417.;"
L3_072_000M1_scaffold_729_20
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31893..32249
DNA (357bp) protein (119aa)
Toxin-antitoxin system n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GKJ2_EUBLK
toxin-antitoxin system
Toxin-antitoxin system {ECO:0000313|EMBL:ADO35999.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
L3_072_000M1_scaffold_729_21
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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32251..33087
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LLV9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EET58369.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
Virulence protein
L3_072_000M1_scaffold_729_22
Firmicutes bacterium CAG:449, Firmicutes, Bacteria

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33120..33335
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:449 RepID=R6R7S9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC41359.1}; TaxID=1263023 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:449.;"
L3_072_000M1_scaffold_729_23
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33332..34000
DNA (669bp) protein (223aa)
Resolvase protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BAU5_9CLOT
Resolvase protein {ECO:0000313|EMBL:ERI75239.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
Resolvase domain-containing protein
L3_072_000M1_scaffold_729_24
Firmicutes bacterium CAG:555, Firmicutes, Bacteria

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comp(34502..34801)
DNA (300bp) protein (100aa)
Pretoxin HINT domain protein n=1 Tax=Firmicutes bacterium CAG:555 RepID=R5D5S5_9FIRM
Pretoxin HINT domain protein {ECO:0000313|EMBL:CCX71251.1}; TaxID=1263030 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:555.;"
L3_072_000M1_scaffold_729_25
Firmicutes bacterium CAG:475, Firmicutes, Bacteria

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comp(35003..35230)
DNA (228bp) protein (76aa)
Hypothetical membrane protein n=1 Tax=Firmicutes bacterium CAG:475 RepID=R7BTS7_9FIRM
Hypothetical membrane protein {ECO:0000313|EMBL:CDD69191.1}; TaxID=1263026 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:475.;"
L3_072_000M1_scaffold_729_26
Eubacterium sp. CAG:115, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35429..35893
DNA (465bp) protein (155aa)
C_GCAxxG_C_C family probable redox protein n=1 Tax=Eubacterium sp. CAG:115 RepID=R5LLE4_9FIRM
C_GCAxxG_C_C family probable redox protein {ECO:0000313|EMBL:CCY73926.1}; TaxID=1262878 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:115.;"
C_GCAxxG_C_C family probable redox protein
L3_072_000M1_scaffold_729_27
unknown

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comp(36462..36602)
DNA (141bp) protein (47aa)

This feature has no annotations

Displaying 27 items

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