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L3_072_000M1_scaffold_799

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_799_1
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(59..2878)
DNA (2820bp) protein (940aa)
Uncharacterized protein n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7G1W2_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDE21439.1}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
hypothetical protein
L3_072_000M1_scaffold_799_2
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2891..4534)
DNA (1644bp) protein (548aa)
Phosphomannomutase (EC:5.4.2.2 5.4.2.8)
Phosphoglucomutase n=9 Tax=Clostridium RepID=N9VU68_9CLOT
Phosphoglucomutase {ECO:0000313|EMBL:ENZ61682.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
L3_072_000M1_scaffold_799_3
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

Not on your lists

comp(4538..5575)
DNA (1038bp) protein (346aa)
Glycosidase PH1107-related protein n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6TXK7_9FIRM
Glycosidase PH1107-related protein {ECO:0000313|EMBL:CDC76915.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
glycosidase protein
L3_072_000M1_scaffold_799_4
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5599..7188)
DNA (1590bp) protein (530aa)
Glycoside hydrolase family 20 catalytic core n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7G569_9PROT
Glycoside hydrolase family 20 catalytic core {ECO:0000313|EMBL:CDE21883.1}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
Glycosyl hydrolase family 20 protein
L3_072_000M1_scaffold_799_5
unknown

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comp(7299..8399)
DNA (1101bp) protein (367aa)

This feature has no annotations

L3_072_000M1_scaffold_799_6
unknown

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comp(8374..10719)
DNA (2346bp) protein (782aa)

This feature has no annotations

L3_072_000M1_scaffold_799_7
Paenibacillus lactis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10733..13207)
DNA (2475bp) protein (825aa)
Putative uncharacterized protein n=1 Tax=Paenibacillus lactis 154 RepID=G4HIA9_9BACL
Putative uncharacterized protein {ECO:0000313|EMBL:EHB63082.1}; Flags: Precursor;; TaxID=743719 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus lactis 154.;"
L3_072_000M1_scaffold_799_8
unknown

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comp(13227..14804)
DNA (1578bp) protein (526aa)

This feature has no annotations

L3_072_000M1_scaffold_799_9
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14869..15789)
DNA (921bp) protein (307aa)
ABC-type transport system permease component n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7G3T0_9PROT
ABC-type transport system permease component {ECO:0000313|EMBL:CDE21800.1}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
ABC transporter permease
L3_072_000M1_scaffold_799_10
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15807..16751)
DNA (945bp) protein (315aa)
ABC-type transport system permease component n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7G505_9PROT
ABC-type transport system permease component {ECO:0000313|EMBL:CDE21798.1}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
ABC-type carbohydrate transport system, permease component
L3_072_000M1_scaffold_799_11
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16993..17856
DNA (864bp) protein (288aa)
Putative HTH-type transcriptional regulator ChbR n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7FTV9_9PROT
Putative HTH-type transcriptional regulator ChbR {ECO:0000313|EMBL:CDE18235.1}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
DNA-binding domain-containing protein
L3_072_000M1_scaffold_799_12
unknown

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17897..19285
DNA (1389bp) protein (463aa)

This feature has no annotations

L3_072_000M1_scaffold_799_13
Ruminococcus sp. CAG:488, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19524..21797)
DNA (2274bp) protein (758aa)
ABC transporter permease protein n=1 Tax=Ruminococcus sp. CAG:488 RepID=R5XWN4_9FIRM
ABC transporter permease protein {ECO:0000313|EMBL:CDA19055.1}; TaxID=1262959 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:488.;"
ABC-type transport system
L3_072_000M1_scaffold_799_14
Ruminococcus sp. CAG:563, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21797..22498)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6DMM7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA88860.1}; TaxID=1262961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:563.;"
sigma 54 interacting domain-containing protein
L3_072_000M1_scaffold_799_15
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22741..23421
DNA (681bp) protein (227aa)
Response regulator receiver domain protein n=2 Tax=Clostridium RepID=B6FL25_9CLOT
Response regulator receiver domain protein {ECO:0000313|EMBL:EEA83280.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
transcriptional regulator
L3_072_000M1_scaffold_799_16
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23414..24646
DNA (1233bp) protein (411aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
Uncharacterized protein n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7EN99_9FIRM
His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
L3_072_000M1_scaffold_799_17
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24752..25465
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:202 RepID=R6MWU5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC03305.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
VTC domain protein
L3_072_000M1_scaffold_799_18
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

Not on your lists

25458..26159
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6THT2_9STAP
Uncharacterized protein {ECO:0000313|EMBL:CDC69269.1}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
hypothetical protein
L3_072_000M1_scaffold_799_19
Firmicutes bacterium CAG:345, Firmicutes, Bacteria

Not on your lists

26149..28254
DNA (2106bp) protein (702aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:345 RepID=R6Z021_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD23857.1}; TaxID=1263020 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:345.;"
hypothetical protein
L3_072_000M1_scaffold_799_20
Subdoligranulum sp. CAG:314, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28505..29167)
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K3S5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE70945.1}; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="Subdoligranulum sp. CAG:314.;"
hypothetical protein
L3_072_000M1_scaffold_799_21
Subdoligranulum sp. CAG:314, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29270..30094
DNA (825bp) protein (275aa)
Transcription regulator of multidrug-efflux transporter n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K4Y2_9FIRM
Transcription regulator of multidrug-efflux transporter {ECO:0000313|EMBL:CDE70946.1}; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="Subdoligranulum sp. CAG:314.;"
hypothetical protein
L3_072_000M1_scaffold_799_22
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30110..33106)
DNA (2997bp) protein (999aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
TIGR00375 family protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XF92_9CLOT
hypothetical protein
L3_072_000M1_scaffold_799_23
Faecalibacterium sp. CAG:1138, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33320..35332)
DNA (2013bp) protein (671aa)
ATP-dependent DNA helicase RecG n=1 Tax=Thermoanaerobacter mathranii (strain DSM 11426 / CIP 108742 / A3) RepID=D7APE6_THEM3
ATP-dependent DNA helicase RecG
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:CCY04145.1}; TaxID=1262896 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:1138.;"
L3_072_000M1_scaffold_799_24
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35376..37013)
DNA (1638bp) protein (546aa)
Uncharacterized protein n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7G399_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDE21411.1}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
DAK2 domain fusion protein YloV
L3_072_000M1_scaffold_799_25
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37045..37395)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7G2N2_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDE21410.1}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
alkaline shock protein
L3_072_000M1_scaffold_799_26
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


37605..37796
DNA (192bp) protein (64aa)
50S ribosomal protein L28 n=1 Tax=Clostridium sp. CAG:349 RepID=R6WLR7_9CLOT
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
50S ribosomal protein L28
L3_072_000M1_scaffold_799_27
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37982..38638)
DNA (657bp) protein (219aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7FYW3_9PROT
L3_072_000M1_scaffold_799_28
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38628..39470)
DNA (843bp) protein (281aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Clostridium sp. CAG:349 RepID=R6WLD1_9CLOT
ribosome-associated GTPase
L3_072_000M1_scaffold_799_29
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(39467..40513)
DNA (1047bp) protein (349aa)
Dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; 23S rRNA m2A2503 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; Ribosomal RNA large subunit methyltransferase N {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA (adenine(37)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; tRNA m2A37 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01849}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
23S rRNA m(2)A-2503 methyltransferase (EC:2.1.1.-)
Dual-specificity RNA methyltransferase RlmN n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7G338_9PROT
L3_072_000M1_scaffold_799_30
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(40510..41754)
DNA (1245bp) protein (415aa)
Ribosomal RNA small subunit methyltransferase B n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7FZT6_9PROT
Ribosomal RNA small subunit methyltransferase B {ECO:0000313|EMBL:CDE20420.1}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
sun; sun protein
Displaying items 1-30 of 33 in total

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