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L3_072_000M1_scaffold_3364_2

Organism: dasL3_072_000M1_concoct_82_fa

near complete RP 49 / 55 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 3533..7117

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1262970 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum; environmental samples.;" source="Subdoligranulum sp. CAG:314.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.5
  • Coverage: 1185.0
  • Bit_score: 1721
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 67.4
  • Coverage: 1186.0
  • Bit_score: 1598
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Subdoligranulum sp. CAG:314 RepID=R7K774_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 72.5
  • Coverage: 1185.0
  • Bit_score: 1721
  • Evalue 0.0

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Taxonomy

Subdoligranulum sp. CAG:314 → Subdoligranulum → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3585
ATGTTTGAACTGAATAATTTTGATTCGATACAGATCGGAGTAGCGTCTCCCGAAAAGATCAGAGAGTGGTCGTACGGCGAGGTCACCAAGCCGGAGACCATCAATTACAGAACGCAGAAGCCGGAAATCGGCGGGCTGTTCTGCGAGCGCATCTTCGGGCCGACCAAGGACTGGGAGTGCCACTGCGGCAAATACAAGCGGATCCGCTATAAGGGCGTCATCTGCGACAAGTGCGGCGTCGAGGTCACCCGTTCCAAGGTGAGAAGAGAGCGCATGGGGCACATCGAGCTGGCGGCTCCCGTCTCGCACATCTGGTATTTTAAGGGCGTTCCCTCCCGCATCGGGCTCATGCTGGATATGAGCCCCAAGGCGCTCGAGCAGGTGCTGTATTTCGCCTGCCACGTGGTGCTCGATCCGGGCACCAGCGACCTCACCTACAAGCAGGTGATCAACGACCGGGAAAAGGAGGAAAAGGAGGCGCAGTTCGGCGCCGGTTCCTTCAAGGTCGGCATGGGCGCGGAGGCGATCAAGGAGCTTCTGATGGCGGTCGATCTCGACAAGGAGAGCGAACAGCTGAAAAAAGTGATCGAGGAGAACGTGAGCGGGCAGAAACGCCTGCGCGCGGTCAAGCGCATCGAGATCATCGAGGCGTTCCGCAAGAGCGGCAACCGCCCCGAATGGATGATTCTGGATGTGCTCCCCGTCATTCCGCCCGAACTCCGCCCGATGGTTCAGCTGGACGGCGGCAGATTCGCGGCCTCCGACCTGAACGACCTCTACCGCCGCGTCATCAACCGCAACAACCGGCTGAAAAAGCTCATGGAGCTGTACGCGCCGGAGATCATGATCAGAAACGAAAAGCGCATGTTGCAGGAAGCGGTGGATGCGCTCATCGACAACGGCCGCCGCGGCAAGGCGGTGTCCGGCGCGGGCAACCGCGACCTGAAGTCCCTCTCGGGGATGCTCCGCGGCAAGCAGGGGCGGTTCCGCCAGAACCTCCTCGGCAAGCGCGTGGACTATTCCGGCCGTTCGGTTATCGTCGTCGGCCCCGAACTGAAACTCTATCAGTGCGGACTCCCCAAGGAAATGGCGATCGAGCTGTTCAAGCCGTTCGTCATGAAAAAGCTGGTGGAAACCGGCGTATGCCACAACATCAAAAACGCGAAGCGCACGGTCGAGCGGGCGAAACCCGTCGTGTGGGACGTGCTGGAAGAGGTCATCAAGGACCATCCCGTGCTCTTAAACCGCGCGCCTACGCTGCACAGATTATCCATTCAGGCGTTTGAACCCGTCCTGATCGAGGGCAGGGCGATCAAGCTCCACCCGCTGGTCTGCGGCGCGTTCAACGCGGACTTCGACGGCGACCAGATGGCGGTGCACGTGCCCCTCTCCATCGAGGCGCAGGCGGAAGCGAGATTCCTGATGCTCGCCTCCAACAATATTCTGAAGCTGTCCGACGGAAAGCCGGTGATGTCCCCCTCGCAGGACATGGTCATGGGATCCTATTATCTGACCATCATCAAGCGCCACGAGGGAGGAAAGTACGACCAGTACTGCAGGGAATGCGAGGACGGCGAGCTCTATACCCCCGGCCTCTATATTTCCGAGGACGAGGCGATCATGGCGTATCAGACCAAGGTCATCAACCTGCAGGATGAAATCTACGTCCGCCGCACCGTGACGACGCCGGACGGCAGAGCGGTCTCCGGCAGAACCAAAACGACGGTCGGGCGCATTATCTTCAACGAGGCGATCCCCCAGGATCTGGGATTCGCCGAACGGGAAAAAGACGAGGATTATCTCAAATATGAGATCGACTTCCTGGTGGGAAAGAAGCACCTTTCCAAGATCGTGGACGCGTGCTTCAAGGTGCACGGTTCGCAGTGCGCCGCCGAGGTGCTGGACAAGATCAAGGCGCTCGGCTACAAATACTCCACCATCGGGGCGATCACGACCAGCGTATTCGACATGCACATGCCCAAGGAAAAGGCGCAGATTCTGTCCGAAGCGGAGCAGGAAGTGCTGGGCGTCGAACGCAAATACAAGCGCGGCTTCATGACGGATGACGAGCGCTATAAGAAAGTCGTCTCCATCTGGAAGGACGCGACCGAAGAGGTTACGGAGCACCTGAAGGGCACGCTGGACGAGTTCAACCCCATCTGGATGATGGCGAACTCGGGTGCGCGCGGCTCCATCGACCAGATCAAACAGCTCGCGGGCATGCGCGGACTGATGACCGACCCGAACGGTAAGACCATCGAGATTCCGGTCAAGTCCTGCTTCCGCGAGGGGCTTACCGTTCTGGAATACTTCATTTCCTCCCACGGCGGACGGAAAGGTCTGGCGGATACCGCGCTGAAGACGGCGGACTCCGGCTACCTGACCCGCCGTCTGGTGGACGTTTCGCAGGACGTCATCGTCCGGGAAGACGACTGCTTCGCCGCGCTCGGCGAGAAGGCGAAGGGCGTCAAGGTCTCCGCGATCAAGGGGACAAAGGGCGAGATCATCGAAAAACTCGAAGACCGCCTGATCGGCCGCTTTACCGTGGGCGACGTCGTTCATCCGGAGACGGGCGAGGTGCTCGTCGCCGCCAATACGATGATCAGCGAGGAACAGGCGAAGAACATCGTCAAAGCCGGCATCGAGGAAGTGGAGATCCGCAGTATCTTTACCTGTAAGTCGCGGCACGGCGTCTGCGCCAAGTGCTACGGCAAGAATATGAGCAACGGGCTCCCCGTTCAGGTTGGCGAAGCGGTGGGTATCATCGCGGCGCAGTCCATCGGAGAGCCGGGTACCCAGCTGACGATGCGTACCTTCCATACGGGCGGTATCGCGAGCACGGGCGACATCACGCAGGGTCTGCCGCGCGTCGAAGAGCTCTTCGAGGCGCGCCGTCCCAAGCGCTCGGCGATCGTCTGCGAAGTGGGCGGCATCGTGCGCATCGAGGAAAAGGATAAACTCCTCCACGTCATCGTCGATACGCCGACCGGTGAGGCGAAGGATTACCTCATTCCCTTCGGCTTCGGCGTCCTCGTCAAGACGGGGGACGAAGTTGTCCCCGGGACGATTCTGACCAACGGCGCGGTCTATCCGCAGGATATCTTAAAGACCCAGGGCGTCAAGGGCGTTCAGGACTATATCTTAAAGGAAATTCAGTCCGTCTACCGTTCGCAGGGCGTCGATATCAACGACAAACACGTCGAGATCATCGTCCGCCAGATGCTGAAGAAGGTTCAGGTGGAAAACCCGGGCGACACGGATATTCTTCCGGGCGAAAAGCTGGATATCTTCCGCTTTGAGGACGAAAACCTCCAGGCGCTGGAAGCGGGCAAGTGCCCCGCGACCGGAAAGCGCACCCTGCTCGGCATCACGAAGGCCGCGCTCGCGACGGAATCCTTCCTGTCCGCGGCGTCCTTCCAGGAGACCGCGCGCGTTCTCACCGAAGCCGCGATCAAAAACAAGATCGATCCGCTGATCGGGCTGAAGGAAAACGTCATCATCGGCAAACTCATCCCCGCGGGCACAGGCGTCAAAGAGTACAAAAACCTCTCCCCGCAGGTCACCGCGATTTCTGCGGAAAAATAA
PROTEIN sequence
Length: 1195
MFELNNFDSIQIGVASPEKIREWSYGEVTKPETINYRTQKPEIGGLFCERIFGPTKDWECHCGKYKRIRYKGVICDKCGVEVTRSKVRRERMGHIELAAPVSHIWYFKGVPSRIGLMLDMSPKALEQVLYFACHVVLDPGTSDLTYKQVINDREKEEKEAQFGAGSFKVGMGAEAIKELLMAVDLDKESEQLKKVIEENVSGQKRLRAVKRIEIIEAFRKSGNRPEWMILDVLPVIPPELRPMVQLDGGRFAASDLNDLYRRVINRNNRLKKLMELYAPEIMIRNEKRMLQEAVDALIDNGRRGKAVSGAGNRDLKSLSGMLRGKQGRFRQNLLGKRVDYSGRSVIVVGPELKLYQCGLPKEMAIELFKPFVMKKLVETGVCHNIKNAKRTVERAKPVVWDVLEEVIKDHPVLLNRAPTLHRLSIQAFEPVLIEGRAIKLHPLVCGAFNADFDGDQMAVHVPLSIEAQAEARFLMLASNNILKLSDGKPVMSPSQDMVMGSYYLTIIKRHEGGKYDQYCRECEDGELYTPGLYISEDEAIMAYQTKVINLQDEIYVRRTVTTPDGRAVSGRTKTTVGRIIFNEAIPQDLGFAEREKDEDYLKYEIDFLVGKKHLSKIVDACFKVHGSQCAAEVLDKIKALGYKYSTIGAITTSVFDMHMPKEKAQILSEAEQEVLGVERKYKRGFMTDDERYKKVVSIWKDATEEVTEHLKGTLDEFNPIWMMANSGARGSIDQIKQLAGMRGLMTDPNGKTIEIPVKSCFREGLTVLEYFISSHGGRKGLADTALKTADSGYLTRRLVDVSQDVIVREDDCFAALGEKAKGVKVSAIKGTKGEIIEKLEDRLIGRFTVGDVVHPETGEVLVAANTMISEEQAKNIVKAGIEEVEIRSIFTCKSRHGVCAKCYGKNMSNGLPVQVGEAVGIIAAQSIGEPGTQLTMRTFHTGGIASTGDITQGLPRVEELFEARRPKRSAIVCEVGGIVRIEEKDKLLHVIVDTPTGEAKDYLIPFGFGVLVKTGDEVVPGTILTNGAVYPQDILKTQGVKGVQDYILKEIQSVYRSQGVDINDKHVEIIVRQMLKKVQVENPGDTDILPGEKLDIFRFEDENLQALEAGKCPATGKRTLLGITKAALATESFLSAASFQETARVLTEAAIKNKIDPLIGLKENVIIGKLIPAGTGVKEYKNLSPQVTAISAEK*