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L3_072_000M1_scaffold_1178_18

Organism: dasL3_072_000M1_concoct_82_fa

near complete RP 49 / 55 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 23763..24473

Top 3 Functional Annotations

Value Algorithm Source
rluD1; ribosomal large subunit pseudouridine synthase D (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 50.6
  • Coverage: 231.0
  • Bit_score: 236
  • Evalue 4.10e-60
Pseudouridine synthase n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7G3Y7_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 69.3
  • Coverage: 228.0
  • Bit_score: 332
  • Evalue 2.50e-88
Pseudouridine synthase {ECO:0000313|EMBL:CDE20717.1}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.3
  • Coverage: 228.0
  • Bit_score: 332
  • Evalue 3.60e-88

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Taxonomy

Acidiphilium sp. CAG:727 → Acidiphilium → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 711
ATGGAAGACTTGATTATTTTACATGAAGATAACCATGTGATCGTGGTGTTAAAGCCGCAGAATGTCCCCACCTGTGAGGATGCGAGCGGCGACGAAGACCTCCTTACCATGGTAAAGGCGTACATCAAAAAGACGTACGACAAGCCGGGCAACGCCTATGTGGGGCTGGTGCACCGGCTGGACCGCCCGACGGGCGGCGTCATGGTGTTTGCGAAGAGCTCCAAGGCGGCGGCGCGCCTTTCCGAACAGATGAAGACGGGGGACTTTGAAAAGCGCTACTATACCGTCCTCGCGGGGATCCCGCGGGAAGAGAAGGCGACGCTCGTTCACTACATGAAGAAGAATGCGGTCAACAATATGGTCTACGTCTGCGCGCCAACCACAGAGGGCGCAAAGCGCGCCGAACTGGACTATGCCGTACTTGAAAAGAACGGGGATATCTCCCTGGCGGAGGTGCGCCTCCATACCGGCAGGAGCCATCAGATCCGCGTGCAGATGAACGCGATCGGCACGCCCGTATACGGCGATATGCGTTACGGCGGGGAGAAGGCGAAAAAAGGCTTTCTCGCGCTTTGGGCGCATTATCTCGCCTTCACGCATCCCGTCACCAAGGAGCGGCTGGTATTCGACGTGCAGCCGCCCAAAGACCTCTTTCCCTGGACGGAATTCGATCTCGACGCGCTGATGCGCATCGTCAAGCCGCGCGCTTAA
PROTEIN sequence
Length: 237
MEDLIILHEDNHVIVVLKPQNVPTCEDASGDEDLLTMVKAYIKKTYDKPGNAYVGLVHRLDRPTGGVMVFAKSSKAAARLSEQMKTGDFEKRYYTVLAGIPREEKATLVHYMKKNAVNNMVYVCAPTTEGAKRAELDYAVLEKNGDISLAEVRLHTGRSHQIRVQMNAIGTPVYGDMRYGGEKAKKGFLALWAHYLAFTHPVTKERLVFDVQPPKDLFPWTEFDLDALMRIVKPRA*