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L3_072_000M1_scaffold_1178

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_1178_1
unknown

Not on your lists

comp(3..98)
DNA (96bp) protein (32aa)

This feature has no annotations

L3_072_000M1_scaffold_1178_2
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1639..2127
DNA (489bp) protein (163aa)
Putative uncharacterized protein n=2 Tax=Eubacterium siraeum RepID=D4MKA0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL34183.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L3_072_000M1_scaffold_1178_3
unknown

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2293..2646
DNA (354bp) protein (118aa)

This feature has no annotations

L3_072_000M1_scaffold_1178_4
Clostridium sp. CAG:288, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2734..6330
DNA (3597bp) protein (1199aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:288 RepID=R7FNX3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE15407.1}; TaxID=1262791 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:288.;"
L3_072_000M1_scaffold_1178_5
Clostridium sp. CAG:288, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6392..8473
DNA (2082bp) protein (694aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:288 RepID=R7FLB7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDE15406.1}; TaxID=1262791 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:288.;"
membrane-spanning protein
L3_072_000M1_scaffold_1178_6
Clostridium sp. CAG:288, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8484..9719
DNA (1236bp) protein (412aa)
Acetyl xylan esterase putative axe2B n=1 Tax=Clostridium sp. CAG:288 RepID=R7FJ91_9CLOT
Acetyl xylan esterase putative axe2B {ECO:0000313|EMBL:CDE15404.1}; TaxID=1262791 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:288.;"
L3_072_000M1_scaffold_1178_7
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

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9812..10486
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6UK99_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC71217.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
hypothetical protein
L3_072_000M1_scaffold_1178_8
[Clostridium] cellulosi, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10542..12044
DNA (1503bp) protein (501aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=29343 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] cellulosi.;"
4-alpha-glucanotransferase n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M7B3_9FIRM
glycogen/starch/alpha-glucan phosphorylase
L3_072_000M1_scaffold_1178_9
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12146..12523)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7G5P5_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDE22083.1}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
L3_072_000M1_scaffold_1178_10
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12517..13200)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7G4K6_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDE22085.1}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
hypothetical protein
L3_072_000M1_scaffold_1178_11
Corallococcus sp. CAG:1435, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13442..14059
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Corallococcus sp. CAG:1435 RepID=R5VV60_9DELT
Uncharacterized protein {ECO:0000313|EMBL:CCZ94758.1}; TaxID=1262867 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus; environmental samples.;" source="Corallococcus sp. CAG:1435.;"
hypothetical protein
L3_072_000M1_scaffold_1178_12
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14016..15638)
DNA (1623bp) protein (541aa)
Putative stage V sporulation protein B n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7G3S8_9PROT
Putative stage V sporulation protein B {ECO:0000313|EMBL:CDE22089.1}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
stage V sporulation protein B
L3_072_000M1_scaffold_1178_13
unknown

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15664..15951
DNA (288bp) protein (96aa)

This feature has no annotations

L3_072_000M1_scaffold_1178_14
Coprobacillus sp. CAG:698, Tenericutes, Bacteria

Not on your lists

16552..18075
DNA (1524bp) protein (508aa)
Xanthine/uracil/vitamin C permease n=1 Tax=Coprobacillus sp. CAG:698 RepID=R5G2B6_9FIRM
Xanthine/uracil/vitamin C permease {ECO:0000313|EMBL:CCY07052.1}; TaxID=1262856 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:698.;"
xanthine/uracil/vitamin C permease
L3_072_000M1_scaffold_1178_15
unknown

Not on your lists

18185..19075
DNA (891bp) protein (297aa)

This feature has no annotations

L3_072_000M1_scaffold_1178_16
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19779..22904
DNA (3126bp) protein (1042aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02003}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7FZS6_9PROT
L3_072_000M1_scaffold_1178_17
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22901..23761
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7G1U2_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDE20718.1}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
hypothetical protein
L3_072_000M1_scaffold_1178_18
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23763..24473
DNA (711bp) protein (237aa)
rluD1; ribosomal large subunit pseudouridine synthase D (EC:4.2.1.70)
Pseudouridine synthase n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7G3Y7_9PROT
Pseudouridine synthase {ECO:0000313|EMBL:CDE20717.1}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
L3_072_000M1_scaffold_1178_19
Corallococcus sp. CAG:1435, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24470..25093)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Corallococcus sp. CAG:1435 RepID=R5VUT4_9DELT
Uncharacterized protein {ECO:0000313|EMBL:CCZ94623.1}; TaxID=1262867 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus; environmental samples.;" source="Corallococcus sp. CAG:1435.;"
L3_072_000M1_scaffold_1178_20
unknown

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25239..27107
DNA (1869bp) protein (623aa)

This feature has no annotations

Displaying 20 items

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