ggKbase home page

L3_072_000M1_scaffold_8200

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_8200_1
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..177)
DNA (177bp) protein (59aa)
Sortase family protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GYH0_9FIRM
Sortase family protein {ECO:0000313|EMBL:CDB26296.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
L3_072_000M1_scaffold_8200_2
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(174..1904)
DNA (1731bp) protein (577aa)
LPXTG-motif cell wall anchor domain protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HJW8_9FIRM
LPXTG-motif cell wall anchor domain protein {ECO:0000313|EMBL:CDB26297.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
Gram positive anchor.
L3_072_000M1_scaffold_8200_3
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1908..3347)
DNA (1440bp) protein (480aa)
Putative uncharacterized protein n=1 Tax=Clostridium clostridioforme 2_1_49FAA RepID=G5I316_9CLOT
Cna protein B-type domain.
Cna protein B-type domain {ECO:0000313|EMBL:CBK76364.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L3_072_000M1_scaffold_8200_4
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3423..3629)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A6 RepID=R0CWJ7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ61117.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Signal recognition particle-docking protein FtsY
L3_072_000M1_scaffold_8200_5
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4143..4505)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GZZ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB27299.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L3_072_000M1_scaffold_8200_6
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4756..6099
DNA (1344bp) protein (448aa)
MATE efflux family protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H307_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EEU97741.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
putative efflux protein, MATE family
L3_072_000M1_scaffold_8200_7
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6157..7665)
DNA (1509bp) protein (503aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M982_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS67378.1}; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
hypothetical protein
L3_072_000M1_scaffold_8200_8
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(7675..7917)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RWR0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ45650.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
hypothetical protein
L3_072_000M1_scaffold_8200_9
unknown

Not on your lists

comp(7946..8287)
DNA (342bp) protein (114aa)

This feature has no annotations

L3_072_000M1_scaffold_8200_10
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(8319..11087)
DNA (2769bp) protein (923aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02002}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D078_9FIRM
L3_072_000M1_scaffold_8200_11
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(11650..12108)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D9T3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA81754.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
L3_072_000M1_scaffold_8200_12
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12130..13272)
DNA (1143bp) protein (381aa)
Putative competence-damage inducible protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GRL9_9FIRM
Putative competence-damage inducible protein {ECO:0000256|HAMAP-Rule:MF_00226}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
putative competence-damage inducible protein
L3_072_000M1_scaffold_8200_13
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(13285..14457)
DNA (1173bp) protein (391aa)
Probable tRNA sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094284}; EC=2.8.1.4 {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094270};; Sulfur carrier protein ThiS sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021}; Thiamine biosynthesis protein ThiI {ECO:0000256|HAMAP-Rule:MF_00021}; tRNA 4-thiouridine synthase {ECO:0000256|HAMAP-Rule:MF_00021}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
Probable tRNA sulfurtransferase n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DC25_9FIRM
thiI; putative thiamine biosynthesis protein ThiI
L3_072_000M1_scaffold_8200_14
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

comp(14647..16164)
DNA (1518bp) protein (506aa)
Putative magnesium chelatase n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DHB3_9FIRM
Putative magnesium chelatase {ECO:0000313|EMBL:CCX75331.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
putative magnesium chelatase
L3_072_000M1_scaffold_8200_15
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16482..17852
DNA (1371bp) protein (457aa)
Pyruvate-flavodoxin oxidoreductase {ECO:0000256|PIRNR:PIRNR000159}; EC=1.2.7.- {ECO:0000256|PIRNR:PIRNR000159};; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
Pyruvate-flavodoxin oxidoreductase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GZD8_9FIRM
pyruvate ferredoxin/flavodoxin oxidoreductase
L3_072_000M1_scaffold_8200_16
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17840..18433
DNA (594bp) protein (198aa)
Pyruvate-flavodoxin oxidoreductase {ECO:0000256|PIRNR:PIRNR000159}; EC=1.2.7.- {ECO:0000256|PIRNR:PIRNR000159};; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
Pyruvate-flavodoxin oxidoreductase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GZD8_9FIRM
pyruvate ferredoxin/flavodoxin oxidoreductase
Displaying 16 items

View Taxonomy