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L3_072_000M1_scaffold_7360

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_7360_1
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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136..1068
DNA (933bp) protein (311aa)
Phosphate ABC transporter permease protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RXF8_9FIRM
Phosphate ABC transporter permease protein {ECO:0000313|EMBL:CCZ45473.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
pstC; phosphate ABC transporter permease protein
L3_072_000M1_scaffold_7360_2
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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1070..1927
DNA (858bp) protein (286aa)
Phosphate ABC transporter permease protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D343_9FIRM
Phosphate ABC transporter permease protein {ECO:0000313|EMBL:CCX74573.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
pstA; phosphate ABC transporter permease protein
L3_072_000M1_scaffold_7360_3
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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1933..2274
DNA (342bp) protein (114aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
pstB; phosphate ABC transporter ATP-binding protein (EC:3.6.3.27)
Phosphate ABC transporter ATP-binding protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GP92_9FIRM
L3_072_000M1_scaffold_7360_4
Firmicutes bacterium CAG:270, Firmicutes, Bacteria

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2271..2618
DNA (348bp) protein (116aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=1263014 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:270.;"
phosphate ABC transporter ATP-binding protein, PhoT family (TC 3.A.1.7.1) (EC:3.6.3.27)
Phosphate ABC transporter n=1 Tax=Firmicutes bacterium CAG:270 RepID=R7BYU2_9FIRM
L3_072_000M1_scaffold_7360_5
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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2618..3262
DNA (645bp) protein (215aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SFD2_9FIRM
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
phosphate uptake regulator PhoU
L3_072_000M1_scaffold_7360_6
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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4194..5045
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GQ93_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB26555.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
Transglutaminase-like superfamily.
L3_072_000M1_scaffold_7360_7
Lachnospiraceae bacterium JC7, Clostridiales, Clostridia, Firmicutes, Bacteria

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5276..5866
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M5P2_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:ETP72630.1}; TaxID=1165092 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium JC7.;"
TetR family transcriptional regulator
L3_072_000M1_scaffold_7360_8
Ruminococcus bromii, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5958..7100)
DNA (1143bp) protein (381aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=657321 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus bromii L2-63.;"
Signal transduction histidine kinase n=1 Tax=Ruminococcus bromii L2-63 RepID=D4L7S6_9FIRM
Signal transduction histidine kinase
L3_072_000M1_scaffold_7360_9
Eubacterium sp. CAG:841, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7097..7774)
DNA (678bp) protein (226aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=1 Tax=Eubacterium sp. CAG:841 RepID=R7FW41_9FIRM
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:CDE19065.1}; TaxID=1262894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:841.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_072_000M1_scaffold_7360_10
Ruminococcus sp. CAG:724, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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8069..9019
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:724 RepID=R5QC54_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ19821.1}; TaxID=1262966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:724.;"
hypothetical protein
L3_072_000M1_scaffold_7360_11
Eubacterium sp. CAG:841, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9025..9987
DNA (963bp) protein (321aa)
Uncharacterized protein SCO1/SenC/PrrC involved in biogenesis of respiratory and photosynthetic systems n=1 Tax=Eubacterium sp. CAG:841 RepID=R7FW46_9FIRM
Uncharacterized protein SCO1/SenC/PrrC involved in biogenesis of respiratory and photosynthetic systems {ECO:0000313|EMBL:CDE19070.1}; TaxID=1262894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:841.;"
Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems
L3_072_000M1_scaffold_7360_12
unknown

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9991..10644
DNA (654bp) protein (218aa)

This feature has no annotations

L3_072_000M1_scaffold_7360_13
Firmicutes bacterium CAG:466, Firmicutes, Bacteria

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comp(10550..11269)
DNA (720bp) protein (240aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Firmicutes bacterium CAG:466 RepID=R6QYP9_9FIRM
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:CDC27117.1}; TaxID=1263025 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:466.;"
diguanylate cyclase domain-containing protein
Displaying 13 items

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