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L3_072_000M1_scaffold_4575

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_4575_1
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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364..1134
DNA (771bp) protein (257aa)
RNA polymerase sigma factor n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5CZ53_9FIRM
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
putative RNA polymerase sigma factor
L3_072_000M1_scaffold_4575_2
Synergistes sp. 3_1_syn1, Synergistes, Synergistales, Synergistia, Synergistetes, Bacteria

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1245..2384
DNA (1140bp) protein (380aa)
putative cysteine desulfurase (EC:2.8.1.7)
Cysteine desulfurase n=1 Tax=Synergistes sp. 3_1_syn1 RepID=G9PZN6_9BACT
Cysteine desulfurase {ECO:0000313|EMBL:EHL63839.1}; TaxID=457415 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Synergistes.;" source="Synergistes sp. 3_1_syn1.;"
L3_072_000M1_scaffold_4575_3
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2777..3088)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GW50_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB25934.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L3_072_000M1_scaffold_4575_4
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3092..3487)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GNE2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB25935.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
hypothetical protein
L3_072_000M1_scaffold_4575_5
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3502..3747)
DNA (246bp) protein (82aa)
Uncharacterized protein n=2 Tax=Oscillibacter RepID=U2R0P3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK62019.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
hypothetical protein
L3_072_000M1_scaffold_4575_6
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3820..4398)
DNA (579bp) protein (193aa)
Cytidylate kinase n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GQ08_9FIRM
Cytidylate kinase
Cytidylate kinase {ECO:0000313|EMBL:CBL42893.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
L3_072_000M1_scaffold_4575_7
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4494..5132)
DNA (639bp) protein (213aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
nth; endonuclease III (EC:4.2.99.18)
Endonuclease III n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6H0N2_9FIRM
L3_072_000M1_scaffold_4575_8
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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5237..6508
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DA08_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA81834.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
hypothetical protein
L3_072_000M1_scaffold_4575_9
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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6510..6701
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D2B6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX72929.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
hypothetical protein
L3_072_000M1_scaffold_4575_10
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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6698..6796
DNA (99bp) protein (33aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DV47_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA81832.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
L3_072_000M1_scaffold_4575_11
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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7030..7749
DNA (720bp) protein (240aa)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202};; 2-deoxy-D-ribose 5-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114}; Phosphodeoxyriboaldolase {ECO:0000256|HAMAP-Rule:MF_00114}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
deoC; deoxyribose-phosphate aldolase (EC:4.1.2.4)
Deoxyribose-phosphate aldolase n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DVP3_9FIRM
L3_072_000M1_scaffold_4575_12
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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7765..8481
DNA (717bp) protein (239aa)
Purine nucleoside phosphorylase DeoD-type {ECO:0000256|HAMAP-Rule:MF_01627}; Short=PNP {ECO:0000256|HAMAP-Rule:MF_01627};; EC=2.4.2.1 {ECO:0000256|HAMAP-Rule:MF_01627};; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
deoD; purine nucleoside phosphorylase (EC:2.4.2.1)
Purine nucleoside phosphorylase DeoD-type n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RZ31_9FIRM
L3_072_000M1_scaffold_4575_13
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

8651..9826
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D0W9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX72424.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
basic membrane lipoprotein
Displaying 13 items

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