ggKbase home page

L3_072_000M1_scaffold_607

Search features with annotation key words

Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_607_1
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..345)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EBY4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG31045.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
hypothetical protein
L3_072_000M1_scaffold_607_2
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(361..1476)
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EBY3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG31044.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
hypothetical protein
L3_072_000M1_scaffold_607_3
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1666..2283)
DNA (618bp) protein (206aa)
Transcriptional regulator, TetR family n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EBY1_9CLOT
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EEG31042.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
Transcriptional regulator
L3_072_000M1_scaffold_607_4
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2395..2937)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EBY0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG31041.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
hypothetical protein
L3_072_000M1_scaffold_607_5
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3080..3394
DNA (315bp) protein (105aa)
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EBX9_9CLOT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEG31040.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
Helix-turn-helix.
L3_072_000M1_scaffold_607_6
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3492..4022)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EBX8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG31039.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
GntR family transcriptional regulator
L3_072_000M1_scaffold_607_7
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4052..5083)
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EBX7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG31038.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
hypothetical protein
L3_072_000M1_scaffold_607_8
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5061..5237)
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EBX6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG31037.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
L3_072_000M1_scaffold_607_9
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5222..6046)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EBX5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG31036.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
hypothetical protein
L3_072_000M1_scaffold_607_10
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6063..6542)
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EBX4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG31035.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
hypothetical protein
L3_072_000M1_scaffold_607_11
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6603..7748)
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EBX3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG31034.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
hypothetical protein
L3_072_000M1_scaffold_607_12
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7745..8392)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EBX3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG31034.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
hypothetical protein
L3_072_000M1_scaffold_607_13
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8386..9351)
DNA (966bp) protein (322aa)
Phosphoadenosine phosphosulfate reductase family protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EBX2_9CLOT
Phosphoadenosine phosphosulfate reductase family protein {ECO:0000313|EMBL:EEG31033.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
class V aminotransferase
L3_072_000M1_scaffold_607_14
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9354..10052)
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EBX1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG31032.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
hypothetical protein
L3_072_000M1_scaffold_607_15
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10113..10475)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EBX0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG31031.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
L3_072_000M1_scaffold_607_16
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10472..10909)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EBW9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG31030.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
hypothetical protein
L3_072_000M1_scaffold_607_17
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10927..12624)
DNA (1698bp) protein (566aa)
Uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EBW8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG31029.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
hypothetical protein
L3_072_000M1_scaffold_607_18
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12700..13245)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EBW7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG31028.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
hypothetical protein
L3_072_000M1_scaffold_607_19
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13398..13943)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EBW5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG31026.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
hypothetical protein
L3_072_000M1_scaffold_607_20
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13940..14335)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EBW4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG31025.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
hypothetical protein
L3_072_000M1_scaffold_607_21
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14352..15224)
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2D8V5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI77902.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_072_000M1_scaffold_607_22
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15233..15673)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EBW2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG31023.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
hypothetical protein
L3_072_000M1_scaffold_607_23
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15701..16630)
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C077_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI77900.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
membrane protein
L3_072_000M1_scaffold_607_24
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16627..18003)
DNA (1377bp) protein (459aa)
Type II/IV secretion system protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EBW0_9CLOT
Type II/IV secretion system protein {ECO:0000313|EMBL:EEG31021.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
type II secretion system protein E
L3_072_000M1_scaffold_607_25
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17993..18748)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EBV9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG31020.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
hypothetical protein
L3_072_000M1_scaffold_607_26
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18738..19610)
DNA (873bp) protein (291aa)
Putative Flp pilus assembly protein CpaB n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EBV8_9CLOT
Putative Flp pilus assembly protein CpaB {ECO:0000313|EMBL:EEG31019.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
Flp pilus assembly protein CpaB
L3_072_000M1_scaffold_607_27
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19629..20075)
DNA (447bp) protein (149aa)
Peptidase, A24 family n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EBV7_9CLOT
Peptidase, A24 family {ECO:0000313|EMBL:EEG31018.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
hypothetical protein
L3_072_000M1_scaffold_607_28
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20072..20791)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EBV6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG31017.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
L3_072_000M1_scaffold_607_29
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20898..22355)
DNA (1458bp) protein (486aa)
DNA (Cytosine-5-)-methyltransferase {ECO:0000313|EMBL:EEG31016.1}; EC=2.1.1.37 {ECO:0000313|EMBL:EEG31016.1};; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
DNA (Cytosine-5-)-methyltransferase n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EBV5_9CLOT
DNA-cytosine methyltransferase
L3_072_000M1_scaffold_607_30
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22364..22846)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EBV4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG31015.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
Displaying items 1-30 of 58 in total

View Taxonomy