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L3_072_000M1_scaffold_102

Search features with annotation key words

Displaying items 1-30 of 193 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_102_1
Clostridium sp. CAG:632, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(178..1101)
DNA (924bp) protein (308aa)
ABC transporter n=1 Tax=Clostridium sp. CAG:632 RepID=R5KBJ9_9CLOT
ABC transporter {ECO:0000313|EMBL:CCY58556.1}; TaxID=1262830 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:632.;"
amino acid ABC transporter ATP-binding protein
L3_072_000M1_scaffold_102_2
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1088..1783)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:349 RepID=R6WCE5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD08783.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
polar amino acid ABC transporter inner membrane subunit
L3_072_000M1_scaffold_102_3
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1873..2721)
DNA (849bp) protein (283aa)
Extracellular solute-binding protein family 3 n=1 Tax=Clostridium sp. CAG:349 PF0_9CLOT">RepID=R6WPF0_9CLOT
Extracellular solute-binding protein family 3 {ECO:0000313|EMBL:CDD08784.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-)
L3_072_000M1_scaffold_102_4
Eubacterium sp. CAG:841, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2861..4246)
DNA (1386bp) protein (462aa)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuramoyl-L-alanine synthetase {ECO:0000256|HAMAP-Rule:MF_00046}; TaxID=1262894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:841.;"
UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8)
UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Eubacterium sp. CAG:841 RepID=R7FZK7_9FIRM
L3_072_000M1_scaffold_102_5
Eubacterium sp. CAG:841, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4511..4825
DNA (315bp) protein (105aa)
Putative septation protein SpoVG n=1 Tax=Eubacterium sp. CAG:841 RepID=R7FXG5_9FIRM
Putative septation protein SpoVG {ECO:0000313|EMBL:CDE19949.1}; TaxID=1262894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:841.;"
spoVG; putative septation protein SpoVG
L3_072_000M1_scaffold_102_6
Ruminococcus sp. CAG:724, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4873..5361)
DNA (489bp) protein (163aa)
Deoxycytidylate deaminase (EC:3.5.4.12)
Cytidine and deoxycytidylate deaminase zinc-binding region n=1 Tax=Ruminococcus sp. CAG:724 RepID=R5QEI6_9FIRM
Cytidine and deoxycytidylate deaminase zinc-binding region {ECO:0000313|EMBL:CCZ20671.1}; TaxID=1262966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:724.;"
L3_072_000M1_scaffold_102_7
Ruminococcus sp. CAG:254, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5696..6007
DNA (312bp) protein (104aa)
Thioredoxin n=1 Tax=Ruminococcus sp. CAG:254 RepID=R5V0Z5_9FIRM
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1262953 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:254.;"
thioredoxin
L3_072_000M1_scaffold_102_8
Ruminococcus sp. CAG:724, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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6170..7300
DNA (1131bp) protein (377aa)
Alpha-galactosidase {ECO:0000256|RuleBase:RU361168}; EC=3.2.1.22 {ECO:0000256|RuleBase:RU361168};; Melibiase {ECO:0000256|RuleBase:RU361168}; TaxID=1262966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:724.;"
alpha-galactosidase (EC:3.2.1.22)
Alpha-galactosidase n=1 Tax=Ruminococcus sp. CAG:724 RepID=R5PTT6_9FIRM
L3_072_000M1_scaffold_102_9
Ruminococcus sp. CAG:724, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7349..7537
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:724 RepID=R5PZU7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ19599.1}; TaxID=1262966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:724.;"
hypothetical protein
L3_072_000M1_scaffold_102_10
unknown

Not on your lists

comp(7666..8052)
DNA (387bp) protein (129aa)

This feature has no annotations

L3_072_000M1_scaffold_102_11
Ruminococcus sp. CAG:57, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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8281..8592
DNA (312bp) protein (104aa)
DNA-binding helix-turn-helix protein n=1 Tax=Ruminococcus sp. CAG:57 RepID=R6T6Z6_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CDC65499.1}; TaxID=1262962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:57.;"
hypothetical protein predicted by Glimmer/Critica
L3_072_000M1_scaffold_102_12
Eubacterium sp. CAG:786, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8690..8998
DNA (309bp) protein (103aa)
DNA-binding helix-turn-helix protein n=1 Tax=Eubacterium sp. CAG:786 RepID=R5GPN2_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CCY17679.1}; TaxID=1262893 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:786.;"
hypothetical protein predicted by Glimmer/Critica
L3_072_000M1_scaffold_102_13
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9222..10889
DNA (1668bp) protein (556aa)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
Formate-tetrahydrofolate ligase (EC:6.3.4.3)
Formate--tetrahydrofolate ligase n=1 Tax=Clostridium sp. CAG:413 RepID=R6NRT1_9CLOT
L3_072_000M1_scaffold_102_14
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

Not on your lists

comp(10973..11596)
DNA (624bp) protein (208aa)
thiamine pyrophosphokinase (EC:2.7.6.2)
Thiamine diphosphokinase id=4584846 bin=GWF2_Clostridiales_38_85 species=Anaerotruncus colihominis genus=Anaerotruncus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
Tax=GWF2_Clostridiales_38_85_curated
L3_072_000M1_scaffold_102_15
Eubacterium sp. CAG:841, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11622..12437)
DNA (816bp) protein (272aa)
Predicted membrane protein n=1 Tax=Eubacterium sp. CAG:841 RepID=R7FXL0_9FIRM
Predicted membrane protein {ECO:0000313|EMBL:CDE19218.1}; TaxID=1262894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:841.;"
Predicted membrane protein
L3_072_000M1_scaffold_102_16
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12796..13656)
DNA (861bp) protein (287aa)
Conserved repeat domain n=1 Tax=Clostridium sp. CAG:226 RepID=R5BD27_9CLOT
Conserved repeat domain {ECO:0000313|EMBL:CCX49326.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
conserved repeat domain
L3_072_000M1_scaffold_102_17
Acidiphilium sp. CAG:727, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13801..14388)
DNA (588bp) protein (196aa)
Metal dependent phosphohydrolase n=1 Tax=Acidiphilium sp. CAG:727 RepID=R7FWD3_9PROT
putative HD superfamily hydrolase
Metal dependent phosphohydrolase {ECO:0000313|EMBL:CDE19155.1}; TaxID=1262689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium; environmental samples.;" source="Acidiphilium sp. CAG:727.;"
L3_072_000M1_scaffold_102_18
Ruminococcus sp. CAG:724, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14381..16591)
DNA (2211bp) protein (737aa)
Polysaccharide pyruvyl transferase CsaB n=1 Tax=Ruminococcus sp. CAG:724 RepID=R5QHS3_9FIRM
Polysaccharide pyruvyl transferase CsaB {ECO:0000313|EMBL:CCZ20602.1}; TaxID=1262966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:724.;"
polysaccharide pyruvyl transferase
L3_072_000M1_scaffold_102_19
Eubacterium sp. CAG:841, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16698..17639)
DNA (942bp) protein (314aa)
putative transketolase C-terminal section (EC:2.2.1.1)
Transketolase central region n=1 Tax=Eubacterium sp. CAG:841 RepID=R7FZ67_9FIRM
Transketolase central region {ECO:0000313|EMBL:CDE18997.1}; TaxID=1262894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:841.;"
L3_072_000M1_scaffold_102_20
Ruminococcus sp. CAG:724, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17655..18482)
DNA (828bp) protein (276aa)
Transketolase, N-terminal subunit (EC:2.2.1.1)
Transketolase thiamine diphosphate binding subunit n=1 Tax=Ruminococcus sp. CAG:724 RepID=R5Q2N9_9FIRM
Transketolase thiamine diphosphate binding subunit {ECO:0000313|EMBL:CCZ20604.1}; TaxID=1262966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:724.;"
L3_072_000M1_scaffold_102_21
unknown

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18586..18846
DNA (261bp) protein (87aa)

This feature has no annotations

L3_072_000M1_scaffold_102_22
unknown

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comp(18792..19181)
DNA (390bp) protein (130aa)

This feature has no annotations

L3_072_000M1_scaffold_102_23
unknown

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comp(19215..19601)
DNA (387bp) protein (129aa)

This feature has no annotations

L3_072_000M1_scaffold_102_24
unknown

Not on your lists

comp(19620..20510)
DNA (891bp) protein (297aa)

This feature has no annotations

L3_072_000M1_scaffold_102_25
Ruminococcus sp. CAG:403, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20599..21132)
DNA (534bp) protein (178aa)
RNA polymerase sigma factor sigma-70 family n=1 Tax=Ruminococcus sp. CAG:403 RepID=R7H511_9FIRM
RNA polymerase sigma factor sigma-70 family {ECO:0000313|EMBL:CDE34734.1}; TaxID=1262958 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:403.;"
L3_072_000M1_scaffold_102_26
Ruminococcus sp. CAG:488, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21410..21604)
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:488 RepID=R5YH29_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA20606.1}; TaxID=1262959 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:488.;"
hypothetical protein
L3_072_000M1_scaffold_102_27
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22008..23591)
DNA (1584bp) protein (528aa)
asparagine synthase (EC:6.3.5.4)
Asparagine synthetase n=1 Tax=Clostridium sp. CAG:413 RepID=R6NN06_9CLOT
Asparagine synthetase {ECO:0000313|EMBL:CDC12615.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
L3_072_000M1_scaffold_102_28
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23913..26003)
DNA (2091bp) protein (697aa)
Glutamate--ammonia ligase catalytic domain protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6NKF1_9CLOT
Glutamate--ammonia ligase catalytic domain protein {ECO:0000313|EMBL:CDC12618.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
glutamine synthetase
L3_072_000M1_scaffold_102_29
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

Not on your lists

26370..26963
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6U6V3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC75821.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
ANTAR domain-containing protein
L3_072_000M1_scaffold_102_30
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

Not on your lists

27013..28626
DNA (1614bp) protein (538aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_01227}; UTP--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_01227}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
CTP synthase (EC:6.3.4.2)
CTP synthase n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5ER26_9FIRM
Displaying items 1-30 of 193 in total

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