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L3_072_000M1_scaffold_147

Search features with annotation key words

Displaying items 1-30 of 148 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_147_1
Clostridium sp. CAG:138, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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58..771
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:138 RepID=R6AJ96_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA51025.1}; TaxID=1262775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:138.;"
Protein of unknown function (DUF1393).
L3_072_000M1_scaffold_147_2
Eubacterium sp. CAG:841, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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937..1782
DNA (846bp) protein (282aa)
Helix-turn-helix protein n=1 Tax=Eubacterium sp. CAG:841 RepID=R7FXC8_9FIRM
Helix-turn-helix protein {ECO:0000313|EMBL:CDE19535.1}; TaxID=1262894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:841.;"
AraC family transcriptional regulator
L3_072_000M1_scaffold_147_3
Eubacterium sp. CAG:841, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1794..2600
DNA (807bp) protein (269aa)
Predicted sugar phosphatases of the HAD superfamily n=1 Tax=Eubacterium sp. CAG:841 RepID=R7FW65_9FIRM
Predicted sugar phosphatases of the HAD superfamily {ECO:0000313|EMBL:CDE19534.1}; TaxID=1262894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:841.;"
wciA; phosphotransferase
L3_072_000M1_scaffold_147_4
Ruminococcus sp. CAG:724, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2634..3203
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:724 RepID=R5QEW0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ19637.1}; TaxID=1262966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:724.;"
L3_072_000M1_scaffold_147_5
Ruminococcus sp. CAG:724, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3213..3884
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:724 RepID=R5QBL2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ19636.1}; TaxID=1262966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:724.;"
phosphatase
L3_072_000M1_scaffold_147_6
Eubacterium sp. CAG:841, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3955..5367
DNA (1413bp) protein (471aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=1262894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:841.;"
Pyruvate kinase n=1 Tax=Eubacterium sp. CAG:841 RepID=R7FQ59_9FIRM
pyruvate kinase
L3_072_000M1_scaffold_147_7
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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5760..6722
DNA (963bp) protein (321aa)
ABC-type uncharacterized transport system periplasmic component n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DAB0_9FIRM
ABC-type uncharacterized transport system periplasmic component {ECO:0000313|EMBL:CCX72796.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
ABC-type uncharacterized transport system, periplasmic component
L3_072_000M1_scaffold_147_8
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6724..7629
DNA (906bp) protein (302aa)
ABC-type uncharacterized transport system permease component n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HR33_9FIRM
ABC-type uncharacterized transport system permease component {ECO:0000313|EMBL:CCY32190.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
ABC-type uncharacterized transport system, permease component
L3_072_000M1_scaffold_147_9
Roseburia sp. CAG:182, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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7607..8410
DNA (804bp) protein (268aa)
ABC-type uncharacterized transport system ATPase component n=1 Tax=Roseburia sp. CAG:182 RepID=R7R1E4_9FIRM
ABC-type uncharacterized transport system ATPase component {ECO:0000313|EMBL:CDF43365.1}; TaxID=1262942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:182.;"
ABC-type uncharacterized transport system, ATPase component
L3_072_000M1_scaffold_147_10
Ruminococcus sp. CAG:724, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8452..9045)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:724 RepID=R5PVD5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ20198.1}; TaxID=1262966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:724.;"
manganese containing catalase
L3_072_000M1_scaffold_147_11
Ruminococcus sp. CAG:724, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9049..9303)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:724 RepID=R5QGI1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ20197.1}; TaxID=1262966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:724.;"
hypothetical protein
L3_072_000M1_scaffold_147_12
Ruminococcus sp. CAG:724, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9300..9608)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:724 RepID=R5QD57_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ20196.1}; TaxID=1262966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:724.;"
hypothetical protein
L3_072_000M1_scaffold_147_13
Clostridium sp. CAG:567, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9766..10260
DNA (495bp) protein (165aa)
VanZ family protein n=1 Tax=Clostridium sp. CAG:567 RepID=R7M858_9CLOT
VanZ family protein {ECO:0000313|EMBL:CDE97234.1}; TaxID=1262820 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:567.;"
Predicted integral membrane protein
L3_072_000M1_scaffold_147_14
unknown

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comp(10303..10560)
DNA (258bp) protein (86aa)

This feature has no annotations

L3_072_000M1_scaffold_147_15
unknown

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11988..12446
DNA (459bp) protein (153aa)

This feature has no annotations

L3_072_000M1_scaffold_147_16
Ruminococcus sp. CAG:724, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12586..15735)
DNA (3150bp) protein (1050aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02003}; TaxID=1262966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:724.;"
isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase n=1 Tax=Ruminococcus sp. CAG:724 RepID=R5PUT7_9FIRM
L3_072_000M1_scaffold_147_17
Fusobacterium ulcerans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(16052..17371)
DNA (1320bp) protein (440aa)
MATE efflux family protein n=1 Tax=Fusobacterium ulcerans ATCC 49185 RepID=V9HAL5_9FUSO
MATE efflux family protein {ECO:0000313|EMBL:EFS26454.1}; TaxID=469617 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium ulcerans ATCC 49185.;"
mate efflux family protein
L3_072_000M1_scaffold_147_18
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17520..18599)
DNA (1080bp) protein (360aa)
Ser/Thr phosphatase family protein n=1 Tax=Enterococcus faecalis 13-SD-W-01 RepID=S4D880_ENTFL
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:EPH98718.1}; TaxID=1260356 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis 13-SD-W-01.;"
L3_072_000M1_scaffold_147_19
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18620..19099)
DNA (480bp) protein (160aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2SYI9_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN98086.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_072_000M1_scaffold_147_20
Roseburia sp. CAG:50, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19196..19738)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:50 RepID=R5TMS6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ64619.1}; TaxID=1262949 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:50.;"
hypothetical protein
L3_072_000M1_scaffold_147_21
Ruminococcus sp. CAG:724, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19803..20648)
DNA (846bp) protein (282aa)
Aldose epimerase n=1 Tax=Ruminococcus sp. CAG:724 RepID=R5Q052_9FIRM
Aldose epimerase {ECO:0000313|EMBL:CCZ19724.1}; TaxID=1262966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:724.;"
aldose epimerase
L3_072_000M1_scaffold_147_22
Eubacterium sp. CAG:156, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20866..21282
DNA (417bp) protein (139aa)
NUDIX hydrolase n=1 Tax=Eubacterium sp. CAG:156 RepID=R5ZL16_9FIRM
NUDIX hydrolase {ECO:0000313|EMBL:CDA29537.1}; TaxID=1262880 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:156.;"
NUDIX hydrolase
L3_072_000M1_scaffold_147_23
unknown

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21318..21830
DNA (513bp) protein (171aa)

This feature has no annotations

L3_072_000M1_scaffold_147_24
Ruminococcus sp. CAG:724, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21999..23954
DNA (1956bp) protein (652aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=1262966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:724.;"
Threonine--tRNA ligase n=1 Tax=Ruminococcus sp. CAG:724 RepID=R5QF40_9FIRM
threonyl-tRNA synthetase
L3_072_000M1_scaffold_147_25
Ruminococcus sp. CAG:724, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23954..24442
DNA (489bp) protein (163aa)
NUDIX hydrolase n=1 Tax=Ruminococcus sp. CAG:724 RepID=R5QBU1_9FIRM
NUDIX hydrolase {ECO:0000313|EMBL:CCZ19721.1}; TaxID=1262966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:724.;"
hydrolase
L3_072_000M1_scaffold_147_26
Eubacterium sp. CAG:841, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24459..25871
DNA (1413bp) protein (471aa)
F5/8 type C domain protein n=1 Tax=Eubacterium sp. CAG:841 RepID=R7FTP2_9FIRM
F5/8 type C domain protein {ECO:0000313|EMBL:CDE18664.1}; TaxID=1262894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:841.;"
L3_072_000M1_scaffold_147_27
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25868..27271
DNA (1404bp) protein (468aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6NCK1_9CLOT
hypothetical protein
Tax=BJP_IG2069_Clostridiales_48_15
L3_072_000M1_scaffold_147_28
BJP_IG2069_Clostridiales_48_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27518..28915
DNA (1398bp) protein (466aa)
Uncharacterized protein n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KXW3_OSCVS
hypothetical protein
Tax=BJP_IG2069_Clostridiales_48_15
L3_072_000M1_scaffold_147_29
Flavobacterium subsaxonicum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

28939..29583
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI000364A8E3
Hydrolase {ECO:0000313|EMBL:KGO93543.1}; TaxID=1121898 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium subsaxonicum WB 4.1-42 = DSM 21790.;"
hypothetical protein
L3_072_000M1_scaffold_147_30
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

Not on your lists

29611..31203
DNA (1593bp) protein (531aa)
Peptide chain release factor 3 n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6I1W5_9FIRM
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
prfC; Peptide chain release factor 3
Displaying items 1-30 of 148 in total

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