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L3_072_000M1_scaffold_183

Search features with annotation key words

Displaying items 1-30 of 86 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_183_1
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..172
DNA (171bp) protein (57aa)
Putative uncharacterized protein n=1 Tax=Clostridium symbiosum WAL-14163 RepID=E7GQ61_CLOSY
Uncharacterized protein {ECO:0000313|EMBL:EGA92908.1}; TaxID=742740 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum WAL-14163.;"
hypothetical protein
L3_072_000M1_scaffold_183_2
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

185..1051
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Clostridium bolteae 90B3 RepID=N9ZNL1_9CLOT
TrbL/VirB6 plasmid conjugal transfer protein.
Uncharacterized protein {ECO:0000313|EMBL:KGF55507.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L3_072_000M1_scaffold_183_3
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1065..1859
DNA (795bp) protein (265aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
Phage DNA methylase n=3 Tax=Clostridiales RepID=G2T5J2_ROSHA
phage DNA methylase
L3_072_000M1_scaffold_183_4
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

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1952..2452
DNA (501bp) protein (167aa)
Transcriptional activator, adenine-specific DNA methyltransferase (EC:2.1.1.72)
Transcriptional activator adenine-specific DNA methyltransferase n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6H6V7_9FIRM
Transcriptional activator adenine-specific DNA methyltransferase {ECO:0000313|EMBL:CDB29634.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
L3_072_000M1_scaffold_183_5
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

2440..2841
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6GYQ9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB29635.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
hypothetical protein
L3_072_000M1_scaffold_183_6
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

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2789..5155
DNA (2367bp) protein (789aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6H7Y8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB29636.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
hypothetical protein
L3_072_000M1_scaffold_183_7
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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5139..6830
DNA (1692bp) protein (564aa)
NLP/P60 protein n=3 Tax=Clostridiales RepID=G2T5I8_ROSHA
NLP/P60 protein
NlpC/P60 family protein {ECO:0000313|EMBL:EEG95022.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
L3_072_000M1_scaffold_183_8
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

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6844..7110
DNA (267bp) protein (89aa)
PF14193 domain protein n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6H6V9_9FIRM
PF14193 domain protein {ECO:0000313|EMBL:CDB29639.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
hypothetical protein
L3_072_000M1_scaffold_183_9
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

7113..7871
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6GYR4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB29640.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
hypothetical protein
L3_072_000M1_scaffold_183_10
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

7868..8044
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6H7Z1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB29641.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
hypothetical protein
L3_072_000M1_scaffold_183_11
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

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8049..8402
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6HUV1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB29642.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
hypothetical protein
L3_072_000M1_scaffold_183_12
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

8585..8740
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6GVZ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB29643.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
hypothetical protein
L3_072_000M1_scaffold_183_13
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

8737..9084
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6H6W2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB29644.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
hypothetical protein
L3_072_000M1_scaffold_183_14
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

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9244..10590
DNA (1347bp) protein (449aa)
Relaxase/mobilization nuclease domain protein n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6GYR9_9FIRM
Relaxase/mobilization nuclease domain protein {ECO:0000313|EMBL:CDB29645.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
Relaxase/mobilization nuclease family protein
L3_072_000M1_scaffold_183_15
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10865..11320
DNA (456bp) protein (152aa)
Putative uncharacterized protein n=1 Tax=Desulfitobacterium hafniense (strain Y51) RepID=Q24Z96_DESHY
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAE82646.1}; TaxID=138119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense (strain Y51).;"
L3_072_000M1_scaffold_183_16
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11382..12221
DNA (840bp) protein (280aa)
2,5-didehydrogluconate reductase n=1 Tax=Clostridium intestinale URNW RepID=U2N2L0_9CLOT
2,5-didehydrogluconate reductase {ECO:0000313|EMBL:ERK29747.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
2,5-diketo-D-gluconic acid reductase
L3_072_000M1_scaffold_183_17
Ruminococcaceae bacterium 585-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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12295..13554
DNA (1260bp) protein (420aa)
MATE efflux family protein n=1 Tax=Subdoligranulum sp. 4_3_54A2FAA RepID=G9RRF6_9FIRM
Multidrug transporter MatE {ECO:0000313|EMBL:KJF39977.1}; TaxID=1550024 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium 585-1.;"
efflux protein, MATE family
L3_072_000M1_scaffold_183_18
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

14097..14519
DNA (423bp) protein (141aa)
Sigma-70 region 4 n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6HUV9_9FIRM
Sigma-70 region 4 {ECO:0000313|EMBL:CDB29647.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
Sigma-70, region 4.
L3_072_000M1_scaffold_183_19
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

14968..15144
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6GW01_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB29648.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
hypothetical protein
L3_072_000M1_scaffold_183_20
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

15229..16713
DNA (1485bp) protein (495aa)
Resolvase N-terminal domain protein n=1 Tax=Firmicutes bacterium CAG:137 RepID=R6H6W5_9FIRM
Resolvase N-terminal domain protein {ECO:0000313|EMBL:CDB29649.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
Site-specific recombinases, DNA invertase Pin homologs
L3_072_000M1_scaffold_183_21
Geobacillus caldoxylosilyticus, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(16897..17331)
DNA (435bp) protein (145aa)
radical SAM protein n=1 Tax=Geobacillus caldoxylosilyticus RepID=UPI00031CA410
Uncharacterized protein {ECO:0000313|EMBL:GAJ39365.1}; TaxID=1220594 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus caldoxylosilyticus NBRC 107762.;"
L3_072_000M1_scaffold_183_22
Eubacterium sp. CAG:841, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(18466..19086)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:841 RepID=R7FSV2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE17920.1}; TaxID=1262894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:841.;"
L3_072_000M1_scaffold_183_23
Eubacterium sp. CAG:841, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19083..19274)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:841 RepID=R7FTF0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE17921.1}; TaxID=1262894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:841.;"
L3_072_000M1_scaffold_183_24
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19271..20422)
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7EUQ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE06694.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
L3_072_000M1_scaffold_183_25
unknown

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20706..21044
DNA (339bp) protein (113aa)

This feature has no annotations

L3_072_000M1_scaffold_183_26
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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21172..22701
DNA (1530bp) protein (510aa)
resolvase n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C37D38
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EGC02170.1}; TaxID=246199 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus 8.;"
Site-specific recombinases, DNA invertase Pin homologs
L3_072_000M1_scaffold_183_27
Ruminococcus sp. CAG:724, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23047..23763)
DNA (717bp) protein (239aa)
Eukaryotic phosphomannomutase n=1 Tax=Ruminococcus sp. CAG:724 RepID=R5Q0P1_9FIRM
Eukaryotic phosphomannomutase {ECO:0000313|EMBL:CCZ19904.1}; TaxID=1262966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:724.;"
HAD-superfamily hydrolase
L3_072_000M1_scaffold_183_28
Blautia sp. CAG:37, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23964..25394)
DNA (1431bp) protein (477aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:37 RepID=R7JUA3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE67201.1}; TaxID=1262757 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:37.;"
aspartate ammonia-lyase
L3_072_000M1_scaffold_183_29
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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25762..26247
DNA (486bp) protein (162aa)
Transcriptional regulator, AsnC family n=2 Tax=root RepID=A5Z5M1_9FIRM
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:EDM51696.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
transcriptional regulator
L3_072_000M1_scaffold_183_30
Clostridium sp. CAG:632, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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26418..26744
DNA (327bp) protein (109aa)
Transcriptional regulator PadR family n=1 Tax=Clostridium sp. CAG:632 RepID=R5JYQ7_9CLOT
Transcriptional regulator PadR family {ECO:0000313|EMBL:CCY57894.1}; TaxID=1262830 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:632.;"
transcriptional regulator PadR family
Displaying items 1-30 of 86 in total

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