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L3_072_000M1_scaffold_543

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_543_1
Eubacterium sp. CAG:841, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14..1561
DNA (1548bp) protein (516aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:841 RepID=R7FVS2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE18731.1}; TaxID=1262894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:841.;"
hypothetical protein
L3_072_000M1_scaffold_543_2
Eubacterium sp. CAG:841, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1848..3326
DNA (1479bp) protein (493aa)
Stage IV sporulation protein A n=1 Tax=Eubacterium sp. CAG:841 RepID=R7FWZ1_9FIRM
Stage IV sporulation protein A {ECO:0000313|EMBL:CDE19013.1}; TaxID=1262894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:841.;"
spoIVA; Stage IV sporulation protein A
L3_072_000M1_scaffold_543_3
unknown

Not on your lists

comp(3384..4334)
DNA (951bp) protein (317aa)

This feature has no annotations

L3_072_000M1_scaffold_543_4
unknown

Not on your lists

comp(4374..4955)
DNA (582bp) protein (194aa)

This feature has no annotations

L3_072_000M1_scaffold_543_5
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5189..5809
DNA (621bp) protein (207aa)
Flavin reductase {ECO:0000313|EMBL:EEG54152.1}; EC=1.7.-.- {ECO:0000313|EMBL:EEG54152.1};; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
Flavin reductase n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D3D8_9CLOT
NADPH-dependent FMN reductase
L3_072_000M1_scaffold_543_6
Eubacterium sp. CAG:841, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5867..7648
DNA (1782bp) protein (594aa)
Ig-like domain-containing surface protein n=1 Tax=Eubacterium sp. CAG:841 RepID=R7FVX6_9FIRM
Ig-like domain-containing surface protein {ECO:0000313|EMBL:CDE18786.1}; TaxID=1262894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:841.;"
cell surface protein
L3_072_000M1_scaffold_543_7
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7777..8841
DNA (1065bp) protein (355aa)
branched chain amino acid aminotransferase apoenzyme (EC:2.6.1.42)
Branched-chain-amino-acid transaminase n=1 Tax=Clostridium sp. CAG:413 RepID=R6NPU6_9CLOT
Branched-chain-amino-acid transaminase {ECO:0000313|EMBL:CDC10394.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
L3_072_000M1_scaffold_543_8
Clostridium sp. CAG:138, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9093..9653
DNA (561bp) protein (187aa)
bifunctional pyrimidine regulatory protein PyrR/uracil phosphoribosyltransferase (EC:2.4.2.9)
Bifunctional protein PyrR n=1 Tax=Clostridium sp. CAG:138 RepID=R6BCE9_9CLOT
Bifunctional protein PyrR {ECO:0000256|HAMAP-Rule:MF_01219}; TaxID=1262775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:138.;"
L3_072_000M1_scaffold_543_9
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9681..11090
DNA (1410bp) protein (470aa)
Uracil-xanthine permease n=1 Tax=Clostridium sp. CAG:413 RepID=R6P320_9CLOT
Uracil-xanthine permease {ECO:0000313|EMBL:CDC12866.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
uracil-xanthine permease
L3_072_000M1_scaffold_543_10
Catonella morbi, Catonella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11218..12111)
DNA (894bp) protein (298aa)
Putative membrane protein n=1 Tax=Catonella morbi ATCC 51271 RepID=V2ZBJ0_9FIRM
Putative membrane protein {ECO:0000313|EMBL:ESL04285.1}; TaxID=592026 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Catonella.;" source="Catonella morbi ATCC 51271.;"
hypothetical protein
L3_072_000M1_scaffold_543_11
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12108..12371)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9JFE2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS32954.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
hypothetical protein
L3_072_000M1_scaffold_543_12
Eubacterium sp. CAG:202, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12596..12850)
DNA (255bp) protein (85aa)
Sporulation transcriptional regulator SpoIIID n=1 Tax=Eubacterium sp. CAG:202 RepID=R6MTI3_9FIRM
Sporulation transcriptional regulator SpoIIID {ECO:0000313|EMBL:CDC02040.1}; TaxID=1262884 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:202.;"
hypothetical protein
L3_072_000M1_scaffold_543_13
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13086..13661
DNA (576bp) protein (192aa)
Sigma-70 region 2 n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A679_9FIRM
Sigma-70 region 2 {ECO:0000313|EMBL:EDQ97973.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
RNA polymerase subunit sigma-24
L3_072_000M1_scaffold_543_14
unknown

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13642..14394
DNA (753bp) protein (251aa)

This feature has no annotations

L3_072_000M1_scaffold_543_15
Gordonibacter pamelaeae, Gordonibacter, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

14703..16508
DNA (1806bp) protein (602aa)
CRISPR-associated endonuclease Cas9 {ECO:0000256|HAMAP-Rule:MF_01480}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01480};; TaxID=657308 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Gordonibacter.;" source="Gordonibacter pamelaeae 7-10-1-b.;"
CRISPR-associated protein, Csn1 family n=1 Tax=Gordonibacter pamelaeae 7-10-1-b RepID=D6E761_9ACTN
CRISPR-associated protein, Csn1 family
L3_072_000M1_scaffold_543_16
Eubacterium sp. CAG:841, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16717..17268
DNA (552bp) protein (184aa)
Putative stage V sporulation protein T n=1 Tax=Eubacterium sp. CAG:841 RepID=R7FWR9_9FIRM
Putative stage V sporulation protein T {ECO:0000313|EMBL:CDE19141.1}; TaxID=1262894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:841.;"
stage V sporulation protein T
L3_072_000M1_scaffold_543_17
unknown

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comp(17782..18294)
DNA (513bp) protein (171aa)

This feature has no annotations

L3_072_000M1_scaffold_543_18
Clostridium sp. CAG:217, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18434..19723
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:217 RepID=R6J199_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB51471.1}; TaxID=1262779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:217.;"
oxidoreductase
L3_072_000M1_scaffold_543_19
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

19748..20650
DNA (903bp) protein (301aa)
Putative uncharacterized protein id=3750618 bin=GWF2_Firmicute_51_9 species=Desulfosporosinus youngiae genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Firmicute_51_9 organism_group=Firmicute
putative secreted protein
Tax=GWF2_Firmicutes_51_9_curated
L3_072_000M1_scaffold_543_20
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

Not on your lists

20850..22160
DNA (1311bp) protein (437aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
lysC; aspartate kinase (EC:2.7.2.4)
Aspartokinase n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6TUH9_9FIRM
L3_072_000M1_scaffold_543_21
Ruminococcus sp. CAG:724, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22253..22933)
DNA (681bp) protein (227aa)
Polysaccharide deacetylase family sporulation protein PdaB n=1 Tax=Ruminococcus sp. CAG:724 RepID=R5PUB4_9FIRM
Polysaccharide deacetylase family sporulation protein PdaB {ECO:0000313|EMBL:CCZ20170.1}; TaxID=1262966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:724.;"
polysaccharide deacetylase
L3_072_000M1_scaffold_543_22
Eubacterium sp. CAG:841, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23028..23798)
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:841 RepID=R7FVC1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE18488.1}; TaxID=1262894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:841.;"
delta-lactam-biosynthetic de-N-acetylase
L3_072_000M1_scaffold_543_23
Eubacterium sp. CAG:841, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24088..24597
DNA (510bp) protein (170aa)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=1262894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:841.;"
Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Eubacterium sp. CAG:841 RepID=R7FT57_9FIRM
tRNA/rRNA methyltransferase SpoU
L3_072_000M1_scaffold_543_24
Eubacterium sp. CAG:841, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24847..27579
DNA (2733bp) protein (911aa)
Protein translocase subunit SecA n=1 Tax=Eubacterium sp. CAG:841 RepID=R7FT41_9FIRM
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1262894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:841.;"
secA; Protein translocase subunit SecA
L3_072_000M1_scaffold_543_25
Ruminococcus sp. CAG:724, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27627..28301
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:724 RepID=R5PWC6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ20845.1}; TaxID=1262966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:724.;"
L3_072_000M1_scaffold_543_26
Ruminococcus sp. CAG:724, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28340..29890
DNA (1551bp) protein (517aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:724 RepID=R5QF13_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ20846.1}; TaxID=1262966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:724.;"
L3_072_000M1_scaffold_543_27
Eubacterium sp. CAG:841, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29894..30487
DNA (594bp) protein (198aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1262894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:841.;"
Signal peptidase I bacterial type n=1 Tax=Eubacterium sp. CAG:841 RepID=R7FUY6_9FIRM
signal peptidase I
L3_072_000M1_scaffold_543_28
Ruminococcus sp. CAG:724, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30519..31388
DNA (870bp) protein (290aa)
Ribosome biogenesis GTPase A n=1 Tax=Ruminococcus sp. CAG:724 RepID=R5QI21_9FIRM
Ribosome biogenesis GTPase A {ECO:0000256|PIRNR:PIRNR006230}; TaxID=1262966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:724.;"
putative GTP-binding protein
L3_072_000M1_scaffold_543_29
Eubacterium sp. CAG:841, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31486..32100
DNA (615bp) protein (205aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=1262894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:841.;"
Ribonuclease H (EC:3.1.26.4)
Ribonuclease HII n=1 Tax=Eubacterium sp. CAG:841 RepID=R7FT36_9FIRM
L3_072_000M1_scaffold_543_30
Eubacterium sp. CAG:841, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32087..32470
DNA (384bp) protein (128aa)
UPF0102 protein BN797_00359 n=1 Tax=Eubacterium sp. CAG:841 RepID=R7FVA4_9FIRM
UPF0102 protein BN797_00359 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=1262894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:841.;"
TIGR00252 family protein
Displaying items 1-30 of 43 in total

View Taxonomy