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L3_072_000M1_scaffold_17

Search features with annotation key words

Displaying items 1-30 of 251 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_17_1
unknown

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comp(1..126)
DNA (126bp) protein (42aa)

This feature has no annotations

L3_072_000M1_scaffold_17_2
unknown

Not on your lists

comp(306..395)
DNA (90bp) protein (30aa)

This feature has no annotations

L3_072_000M1_scaffold_17_3
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1313..2242)
DNA (930bp) protein (310aa)
Germination protease {ECO:0000256|HAMAP-Rule:MF_00626}; EC=3.4.24.78 {ECO:0000256|HAMAP-Rule:MF_00626};; GPR endopeptidase {ECO:0000256|HAMAP-Rule:MF_00626}; Germination proteinase {ECO:0000256|HAMAP-Rule:MF_00626}; Spore protease {ECO:0000256|HAMAP-Rule:MF_00626}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
spore protease (EC:3.4.24.78)
Germination protease n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I6G7_9FIRM
L3_072_000M1_scaffold_17_4
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


2296..2553
DNA (258bp) protein (86aa)
30S ribosomal protein S20 n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HVY3_9FIRM
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
SSU ribosomal protein S20P
L3_072_000M1_scaffold_17_5
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2746..2925
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6IVR3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB42042.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
L3_072_000M1_scaffold_17_6
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2982..3347)
DNA (366bp) protein (122aa)
Stage V sporulation protein AE n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I9G2_9FIRM
Stage V sporulation protein AE {ECO:0000313|EMBL:CDB42041.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
stage V sporulation protein AE
L3_072_000M1_scaffold_17_7
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3586..3816
DNA (231bp) protein (77aa)
Acyl carrier protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HYG3_9FIRM
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
acyl carrier protein
L3_072_000M1_scaffold_17_8
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3897..5015
DNA (1119bp) protein (373aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I6G3_9FIRM
hypothetical protein
L3_072_000M1_scaffold_17_9
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5084..7648
DNA (2565bp) protein (855aa)
DNA polymerase {ECO:0000256|RuleBase:RU004460}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU004460};; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
DNA polymerase I (EC:2.7.7.7)
DNA polymerase n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HVX5_9FIRM
L3_072_000M1_scaffold_17_10
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7664..8092
DNA (429bp) protein (143aa)
Protein tyrosine phosphatase n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6IVR1_9FIRM
Protein tyrosine phosphatase {ECO:0000313|EMBL:CDB42037.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
hypothetical protein
L3_072_000M1_scaffold_17_11
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8122..8547
DNA (426bp) protein (142aa)
Ribosomal-protein-alanine acetyltransferase n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I9F9_9FIRM
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:CDB42036.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
hypothetical protein
L3_072_000M1_scaffold_17_12
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


8559..9593
DNA (1035bp) protein (345aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00018957}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
O-sialoglycoprotein endopeptidase (EC:3.4.24.57)
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HYF8_9FIRM
L3_072_000M1_scaffold_17_13
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9699..11483
DNA (1785bp) protein (595aa)
Phosphoenolpyruvate carboxykinase [GTP] {ECO:0000256|HAMAP-Rule:MF_00452, ECO:0000256|SAAS:SAAS00222031}; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00452};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00452};; EC=4.1.1.32 {ECO:0000256|HAMAP-Rule:MF_00452};; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
pckG; Phosphoenolpyruvate carboxykinase (EC:4.1.1.32)
Phosphoenolpyruvate carboxykinase [GTP] n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I6G1_9FIRM
L3_072_000M1_scaffold_17_14
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11770..13362)
DNA (1593bp) protein (531aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HVQ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB41993.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
hypothetical protein
L3_072_000M1_scaffold_17_15
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13356..14069)
DNA (714bp) protein (238aa)
ABC-type multidrug transport system ATPase component n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I6A4_9FIRM
ABC-type multidrug transport system ATPase component {ECO:0000313|EMBL:CDB41994.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
ABC-type multidrug transport system, ATPase component
L3_072_000M1_scaffold_17_16
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14161..14916)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HYA5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB41995.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
hypothetical protein
L3_072_000M1_scaffold_17_17
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15440..17170)
DNA (1731bp) protein (577aa)
ABC-type multidrug transport system ATPase and permease component n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I9B9_9FIRM
ABC-type multidrug transport system ATPase and permease component {ECO:0000313|EMBL:CDB41996.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
multidrug ABC transporter ATPase and permease
L3_072_000M1_scaffold_17_18
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17173..18894)
DNA (1722bp) protein (574aa)
ABC transporter related protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6IVN8_9FIRM
ABC transporter related protein {ECO:0000313|EMBL:CDB41997.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
ABC transporter
L3_072_000M1_scaffold_17_19
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19064..19789
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HVS9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB41998.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
hypothetical protein
L3_072_000M1_scaffold_17_20
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19949..21331)
DNA (1383bp) protein (461aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I6C7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB41999.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
hypothetical protein
L3_072_000M1_scaffold_17_21
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21328..22071)
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HYC7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB42000.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
L3_072_000M1_scaffold_17_22
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22090..23274)
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I9D3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB42001.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
L3_072_000M1_scaffold_17_23
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23550..24761
DNA (1212bp) protein (404aa)
phosphoglycerate mutase (EC:5.4.2.1)
Putative homoserine kinase n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6IVP1_9FIRM
Putative homoserine kinase {ECO:0000313|EMBL:CDB42002.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
L3_072_000M1_scaffold_17_24
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24780..26054
DNA (1275bp) protein (425aa)
O-acetylhomoserine (Thiol)-lyase n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HVU0_9FIRM
O-acetylhomoserine (Thiol)-lyase {ECO:0000313|EMBL:CDB42003.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
putative cysteine biosynthesis related protein
L3_072_000M1_scaffold_17_25
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26351..26896)
DNA (546bp) protein (182aa)
Zinc-ribbon domain protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I6D3_9FIRM
Zinc-ribbon domain protein {ECO:0000313|EMBL:CDB42004.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
hypothetical protein
L3_072_000M1_scaffold_17_26
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26930..27142)
DNA (213bp) protein (71aa)
UPF0291 protein BN517_00258 n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HYD6_9FIRM
UPF0291 protein BN517_00258 {ECO:0000256|HAMAP-Rule:MF_01103}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
hypothetical protein
L3_072_000M1_scaffold_17_27
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


27406..27834
DNA (429bp) protein (143aa)
50S ribosomal protein L13 n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I9D8_9FIRM
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
50S ribosomal protein L13
L3_072_000M1_scaffold_17_28
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


27854..28252
DNA (399bp) protein (133aa)
30S ribosomal protein S9 n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6IVP3_9FIRM
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
SSU ribosomal protein S9P
L3_072_000M1_scaffold_17_29
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28638..29909
DNA (1272bp) protein (424aa)
Phosphatidylinositol diacylglycerol-lyase n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HVU7_9FIRM
Phosphatidylinositol diacylglycerol-lyase {ECO:0000313|EMBL:CDB42008.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
hypothetical protein
L3_072_000M1_scaffold_17_30
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30012..31031
DNA (1020bp) protein (340aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
2-dehydropantoate 2-reductase n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I6D9_9FIRM
2-dehydropantoate 2-reductase
Displaying items 1-30 of 251 in total

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