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L3_072_000M1_scaffold_32

Search features with annotation key words

Displaying items 1-30 of 139 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_32_1
unknown

Not on your lists

2..82
DNA (81bp) protein (27aa)

This feature has no annotations

L3_072_000M1_scaffold_32_2
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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711..1739
DNA (1029bp) protein (343aa)
Tyrosine recombinase XerC 1 n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6IAC1_9FIRM
Tyrosine recombinase XerC 1 {ECO:0000313|EMBL:CDB42391.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
integrase family protein
L3_072_000M1_scaffold_32_3
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1736..2365)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6IWN4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB42392.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
hypothetical protein
L3_072_000M1_scaffold_32_4
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2466..3242)
DNA (777bp) protein (259aa)
Acetyltransferase GNAT family n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HWY2_9FIRM
Acetyltransferase GNAT family {ECO:0000313|EMBL:CDB42393.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
N-acetyltransferase GCN5
L3_072_000M1_scaffold_32_5
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3309..3740)
DNA (432bp) protein (144aa)
ACT domain protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I7C4_9FIRM
ACT domain protein {ECO:0000313|EMBL:CDB42394.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
ACT domain-containing protein
L3_072_000M1_scaffold_32_6
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3755..4918)
DNA (1164bp) protein (388aa)
Phenylacetate-coenzyme A ligase {ECO:0000256|PIRNR:PIRNR006444}; EC=6.2.1.30 {ECO:0000256|PIRNR:PIRNR006444};; Phenylacetyl-CoA ligase {ECO:0000256|PIRNR:PIRNR006444}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
phenylacetate-CoA ligase (EC:6.2.1.30)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HZA4_9FIRM
L3_072_000M1_scaffold_32_7
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4962..5546)
DNA (585bp) protein (195aa)
iorB; indolepyruvate ferredoxin oxidoreductase beta subunit IorB (EC:1.2.7.8)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6IAC6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB42396.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
L3_072_000M1_scaffold_32_8
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5563..7296)
DNA (1734bp) protein (578aa)
Indolepyruvate oxidoreductase subunit IorA {ECO:0000256|PIRNR:PIRNR006439}; Short=IOR {ECO:0000256|PIRNR:PIRNR006439};; EC=1.2.7.8 {ECO:0000256|PIRNR:PIRNR006439};; Indolepyruvate ferredoxin oxidoreductase subunit alpha {ECO:0000256|PIRNR:PIRNR006439}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
indolepyruvate ferredoxin oxidoreductase, alpha subunit (EC:1.2.7.8)
Indolepyruvate ferredoxin oxidoreductase alpha subunit n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6IWN9_9FIRM
L3_072_000M1_scaffold_32_9
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7312..8616)
DNA (1305bp) protein (435aa)
Phenylacetate-coenzyme A ligase {ECO:0000256|PIRNR:PIRNR006444}; EC=6.2.1.30 {ECO:0000256|PIRNR:PIRNR006444};; Phenylacetyl-CoA ligase {ECO:0000256|PIRNR:PIRNR006444}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
phenylacetate-CoA ligase (EC:6.2.1.30)
Phenylacetate-coenzyme A ligase n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HWY8_9FIRM
L3_072_000M1_scaffold_32_10
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8682..10202)
DNA (1521bp) protein (507aa)
Transporter SSS family n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I7C8_9FIRM
Transporter SSS family {ECO:0000313|EMBL:CDB42399.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
SSS sodium solute transporter superfamily protein
L3_072_000M1_scaffold_32_11
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10303..10659)
DNA (357bp) protein (119aa)
Sporulation protein YlmC/YmxH family n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HZB0_9FIRM
Sporulation protein YlmC/YmxH family {ECO:0000313|EMBL:CDB42400.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
ymxH; sporulation protein, YlmC/YmxH family
L3_072_000M1_scaffold_32_12
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10649..11359)
DNA (711bp) protein (237aa)
RNA polymerase sigma factor n=1 Tax=Clostridium sp. CAG:413 RepID=R6NXF4_9CLOT
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
RNA polymerase, sigma 29 subunit, SigE
L3_072_000M1_scaffold_32_13
unknown

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11926..12105
DNA (180bp) protein (60aa)

This feature has no annotations

L3_072_000M1_scaffold_32_14
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12369..13970)
DNA (1602bp) protein (534aa)
Carbohydrate kinase FGGY n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6IWP5_9FIRM
Carbohydrate kinase FGGY {ECO:0000313|EMBL:CDB42402.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
carbohydrate kinase, FGGY
L3_072_000M1_scaffold_32_15
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14110..15138
DNA (1029bp) protein (343aa)
Acyltransferase n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HWZ3_9FIRM
Acyltransferase {ECO:0000313|EMBL:CDB42403.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
hypothetical protein
L3_072_000M1_scaffold_32_16
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15140..16111
DNA (972bp) protein (324aa)
Sugar kinases, ribokinase family (EC:2.7.1.4)
Kinase PfkB family n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I7D5_9FIRM
Kinase PfkB family {ECO:0000313|EMBL:CDB42404.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
L3_072_000M1_scaffold_32_17
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16095..16907
DNA (813bp) protein (271aa)
Type I phosphodiesterase/nucleotide pyrophosphatase n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HZB7_9FIRM
Type I phosphodiesterase/nucleotide pyrophosphatase {ECO:0000313|EMBL:CDB42405.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
L3_072_000M1_scaffold_32_18
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16954..18078)
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6IAD5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB42406.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
hypothetical protein
L3_072_000M1_scaffold_32_19
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18328..19752
DNA (1425bp) protein (475aa)
Melibiose carrier protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6NLP6_9CLOT
Melibiose carrier protein {ECO:0000313|EMBL:CDC13063.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
melB; melibiose carrier protein
L3_072_000M1_scaffold_32_20
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19801..21420)
DNA (1620bp) protein (540aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6PTH1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB42408.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
hypothetical protein
L3_072_000M1_scaffold_32_21
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21425..24262)
DNA (2838bp) protein (946aa)
UvrABC system protein A n=1 Tax=Clostridium sp. CAG:413 RepID=R6P3M5_9CLOT
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
uvrA; UvrABC system protein A
L3_072_000M1_scaffold_32_22
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24278..26203)
DNA (1926bp) protein (642aa)
UvrABC system protein B n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HZC2_9FIRM
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
uvrB; UvrABC system protein B
L3_072_000M1_scaffold_32_23
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26251..26958)
DNA (708bp) protein (236aa)
RadC-like JAB domain protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6IAE0_9FIRM
RadC-like JAB domain protein {ECO:0000313|EMBL:CDB42411.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
DNA repair protein RadC
L3_072_000M1_scaffold_32_24
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27089..28594)
DNA (1506bp) protein (502aa)
Aminotransferase class III n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6IWQ4_9FIRM
Aminotransferase class III {ECO:0000313|EMBL:CDB42412.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
hemL-2; glutamate-1-semialdehyde aminotransferase
L3_072_000M1_scaffold_32_25
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28591..29223)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HX02_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB42413.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
Hypothetical protein
L3_072_000M1_scaffold_32_26
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29365..30399)
DNA (1035bp) protein (345aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I7E3_9FIRM
L3_072_000M1_scaffold_32_27
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30473..31714)
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HZC6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB42415.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
ypnP2; multidrug resistance protein YpnP
L3_072_000M1_scaffold_32_28
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31838..34015)
DNA (2178bp) protein (726aa)
Tex-like protein N-terminal domain protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6IAE6_9FIRM
Tex-like protein N-terminal domain protein {ECO:0000313|EMBL:CDB42416.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
Transcriptional accessory protein
L3_072_000M1_scaffold_32_29
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34025..35020)
DNA (996bp) protein (332aa)
DNA replication protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6IWR1_9FIRM
DNA replication protein {ECO:0000313|EMBL:CDB42417.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
DNA replication protein
L3_072_000M1_scaffold_32_30
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35035..36054)
DNA (1020bp) protein (340aa)
Putative peptidase S10 Flavivirus NS3 serine protease n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HX08_9FIRM
Putative peptidase S10 Flavivirus NS3 serine protease {ECO:0000313|EMBL:CDB42418.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
DnaD and phage-associated domain
Displaying items 1-30 of 139 in total

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