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L3_072_000M1_scaffold_67

Search features with annotation key words

Displaying items 1-30 of 188 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_67_1
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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127..369
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YLT1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ENY84331.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
L3_072_000M1_scaffold_67_2
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

341..652
DNA (312bp) protein (104aa)
Sensor histidine kinase n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DDP5_9FIRM
Sensor histidine kinase {ECO:0000313|EMBL:CCX73996.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
histidine kinase
L3_072_000M1_scaffold_67_3
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(806..949)
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I3J8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB41059.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
L3_072_000M1_scaffold_67_4
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(977..2074)
DNA (1098bp) protein (366aa)
peptidase T (EC:3.4.11.-)
Peptidase T n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HVN9_9FIRM
Peptidase T {ECO:0000313|EMBL:CDB41060.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
L3_072_000M1_scaffold_67_5
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2249..3991
DNA (1743bp) protein (581aa)
Alpha-galactosidase {ECO:0000256|RuleBase:RU361168}; EC=3.2.1.22 {ECO:0000256|RuleBase:RU361168};; Melibiase {ECO:0000256|RuleBase:RU361168}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
Truncated alpha-galactosidase n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I6P9_9FIRM
hydrolase
L3_072_000M1_scaffold_67_6
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3996..5237
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6ISV4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB41062.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
BNR/Asp-box repeat-containing protein
L3_072_000M1_scaffold_67_7
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5304..5636
DNA (333bp) protein (111aa)
Competence ComEA helix-hairpin-helix repeat region domain protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HT88_9FIRM
Competence ComEA helix-hairpin-helix repeat region domain protein {ECO:0000313|EMBL:CDB41063.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
ComEA family DNA-binding competence protein
L3_072_000M1_scaffold_67_8
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5662..7146
DNA (1485bp) protein (495aa)
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I3K2_9FIRM
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II {ECO:0000313|EMBL:CDB41064.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
Phosphomannomutase
L3_072_000M1_scaffold_67_9
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7271..10357
DNA (3087bp) protein (1029aa)
Beta-galactosidase {ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|SAAS:SAAS00046613};; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
beta-galactosidase (EC:3.2.1.23)
BgaM n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HVP3_9FIRM
L3_072_000M1_scaffold_67_10
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10689..11648)
DNA (960bp) protein (320aa)
lactate dehydrogenase (EC:1.1.1.29)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I3K6_9FIRM
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding {ECO:0000313|EMBL:CDB41069.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
L3_072_000M1_scaffold_67_11
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11629..12996)
DNA (1368bp) protein (456aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HVP6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB41070.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
Predicted esterase of the alpha-beta hydrolase superfamily
L3_072_000M1_scaffold_67_12
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13178..13921
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I6Q6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB41071.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
membrane spanning protein
L3_072_000M1_scaffold_67_13
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13945..15222
DNA (1278bp) protein (426aa)
galactokinase (EC:2.7.1.6)
GHMP kinase N-terminal domain protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5N3R4_9FIRM
GHMP kinase N-terminal domain protein {ECO:0000313|EMBL:CCY91852.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
L3_072_000M1_scaffold_67_14
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15242..16303)
DNA (1062bp) protein (354aa)
Cell envelope-related transcriptional attenuator n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HT96_9FIRM
Cell envelope-related transcriptional attenuator {ECO:0000313|EMBL:CDB41073.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
hypothetical protein
L3_072_000M1_scaffold_67_15
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16403..17431
DNA (1029bp) protein (343aa)
pepA; putative Glutamyl aminopeptidase (EC:3.4.11.7)
M42 glutamyl aminopeptidase n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I3K9_9FIRM
M42 glutamyl aminopeptidase {ECO:0000313|EMBL:CDB41074.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
L3_072_000M1_scaffold_67_16
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17428..18450
DNA (1023bp) protein (341aa)
pepA; putative Glutamyl aminopeptidase (EC:3.4.11.7)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HVP9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB41075.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
L3_072_000M1_scaffold_67_17
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18443..19207
DNA (765bp) protein (255aa)
FR47-like protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I6R0_9FIRM
FR47-like protein {ECO:0000313|EMBL:CDB41076.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
L3_072_000M1_scaffold_67_18
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19209..20474
DNA (1266bp) protein (422aa)
Pyridoxal phosphate-dependent enzyme methionine gamma-lyase family protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6ISW6_9FIRM
Pyridoxal phosphate-dependent enzyme methionine gamma-lyase family protein {ECO:0000313|EMBL:CDB41077.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
ynbB; putative protein YnbB
L3_072_000M1_scaffold_67_19
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20474..21160
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HT99_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB41078.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
TIGR02453 family protein
L3_072_000M1_scaffold_67_20
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21180..22013
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I3L4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB41079.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
hypothetical protein
L3_072_000M1_scaffold_67_21
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22000..22935
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HVQ2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB41080.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
hypothetical protein
L3_072_000M1_scaffold_67_22
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22941..23411
DNA (471bp) protein (157aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I6R4_9FIRM
ybaK/ebsC protein
L3_072_000M1_scaffold_67_23
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23530..24789
DNA (1260bp) protein (420aa)
O-antigen polymerase family protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6ISX1_9FIRM
O-antigen polymerase family protein {ECO:0000313|EMBL:CDB41082.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
hypothetical protein
L3_072_000M1_scaffold_67_24
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24803..26104
DNA (1302bp) protein (434aa)
Nucleotide sugar dehydrogenase n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HTA5_9FIRM
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:CDB41083.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
nucleotide sugar dehydrogenase
L3_072_000M1_scaffold_67_25
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26134..27657
DNA (1524bp) protein (508aa)
Chain length determinant protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I3L7_9FIRM
Chain length determinant protein {ECO:0000313|EMBL:CDB41084.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
capsular exopolysaccharide family
L3_072_000M1_scaffold_67_26
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27707..27877)
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HVQ7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB41085.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
L3_072_000M1_scaffold_67_27
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27874..29994)
DNA (2121bp) protein (707aa)
Alpha-N-acetylglucosaminidase (NAGLU) n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I6R7_9FIRM
Alpha-N-acetylglucosaminidase (NAGLU) {ECO:0000313|EMBL:CDB41086.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
hypothetical protein
L3_072_000M1_scaffold_67_28
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30166..30705
DNA (540bp) protein (180aa)
BioY family protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6ISX6_9FIRM
BioY family protein {ECO:0000313|EMBL:CDB41087.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
BioY family protein
L3_072_000M1_scaffold_67_29
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30695..31030)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HTA9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB41088.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
L3_072_000M1_scaffold_67_30
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31061..32191)
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I3L9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB41089.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
hypothetical protein
Displaying items 1-30 of 188 in total

View Taxonomy