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L3_072_000M1_scaffold_126

Search features with annotation key words

Displaying items 1-30 of 122 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_126_1
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..979
DNA (978bp) protein (326aa)
Amidinotransferase family protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HYC3_9FIRM
Amidinotransferase family protein {ECO:0000313|EMBL:CDB42903.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
amidinotransferase family protein
L3_072_000M1_scaffold_126_2
unknown

Not on your lists

999..1118
DNA (120bp) protein (40aa)

This feature has no annotations

L3_072_000M1_scaffold_126_3
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1066..1590
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I8U2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB42904.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
L3_072_000M1_scaffold_126_4
Clostridium sp. CAG:448, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2441..2713
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:448 RepID=R6SG79_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC60153.1}; TaxID=1262808 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:448.;"
L3_072_000M1_scaffold_126_5
unknown

Not on your lists

2790..3275
DNA (486bp) protein (162aa)

This feature has no annotations

L3_072_000M1_scaffold_126_6
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4063..5373)
DNA (1311bp) protein (437aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
lysC; aspartate kinase (EC:2.7.2.4)
Aspartokinase n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HYD2_9FIRM
L3_072_000M1_scaffold_126_7
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5696..7189
DNA (1494bp) protein (498aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I8V5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB42914.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
polysaccharide deacetylase
L3_072_000M1_scaffold_126_8
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7390..8061)
DNA (672bp) protein (224aa)
Channel protein hemolysin III family n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I0V7_9FIRM
Channel protein hemolysin III family {ECO:0000313|EMBL:CDB42915.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
hypothetical protein
L3_072_000M1_scaffold_126_9
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8184..9161)
DNA (978bp) protein (326aa)
YceG family protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6IBX7_9FIRM
YceG family protein {ECO:0000313|EMBL:CDB42916.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
hypothetical protein
L3_072_000M1_scaffold_126_10
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9268..10620
DNA (1353bp) protein (451aa)
MATE efflux family protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6IY69_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:CDB42917.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
MATE efflux family protein
L3_072_000M1_scaffold_126_11
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10686..11327)
DNA (642bp) protein (214aa)
Chitooligosaccharide deacetylase n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HYD8_9FIRM
Chitooligosaccharide deacetylase {ECO:0000313|EMBL:CDB42918.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
hypothetical protein
L3_072_000M1_scaffold_126_12
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11331..11696)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I8W2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB42919.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
hypothetical protein
L3_072_000M1_scaffold_126_13
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11865..13709
DNA (1845bp) protein (615aa)
UvrABC system protein C n=1 Tax=Clostridium sp. CAG:413 RepID=R6P383_9CLOT
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
uvrC; UvrABC system protein C
L3_072_000M1_scaffold_126_14
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13799..14347
DNA (549bp) protein (183aa)
RNA methyltransferase RsmD family n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I0W0_9FIRM
RNA methyltransferase RsmD family {ECO:0000313|EMBL:CDB42920.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
RNA methyltransferase, RsmD family
L3_072_000M1_scaffold_126_15
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14344..14841
DNA (498bp) protein (166aa)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
Phosphopantetheine adenylyltransferase (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6IBY2_9FIRM
L3_072_000M1_scaffold_126_16
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14838..15602
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6IY74_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB42922.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
hypothetical protein
L3_072_000M1_scaffold_126_17
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15619..16083
DNA (465bp) protein (155aa)
C_GCAxxG_C_C family protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HYE4_9FIRM
C_GCAxxG_C_C family protein {ECO:0000313|EMBL:CDB42923.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
C_GCAxxG_C_C family protein
L3_072_000M1_scaffold_126_18
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16396..18309)
DNA (1914bp) protein (638aa)
Putative acetyltransferase/hydrolase with alpha/beta hydrolase fold n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I8W7_9FIRM
Putative acetyltransferase/hydrolase with alpha/beta hydrolase fold {ECO:0000313|EMBL:CDB42924.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
L3_072_000M1_scaffold_126_19
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18306..19733)
DNA (1428bp) protein (476aa)
Major facilitator superfamily MFS_1 n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I0W5_9FIRM
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:CDB42925.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
major facilitator superfamily permease
L3_072_000M1_scaffold_126_20
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19761..20567)
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6ISR2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB41002.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
hypothetical protein
L3_072_000M1_scaffold_126_21
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20715..20978
DNA (264bp) protein (88aa)
Smr domain protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HT34_9FIRM
Smr domain protein {ECO:0000313|EMBL:CDB41003.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
L3_072_000M1_scaffold_126_22
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20978..21838
DNA (861bp) protein (287aa)
glycerophosphodiester phosphodiesterase (EC:3.1.4.46)
Glycerophosphodiester phosphodiesterase family protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I3D9_9FIRM
Glycerophosphodiester phosphodiesterase family protein {ECO:0000313|EMBL:CDB41004.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
L3_072_000M1_scaffold_126_23
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21929..22330
DNA (402bp) protein (134aa)
Ferric uptake regulator Fur family n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HVJ7_9FIRM
Ferric uptake regulator Fur family {ECO:0000313|EMBL:CDB41005.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
perR; Peroxide-responsive repressor PerR
L3_072_000M1_scaffold_126_24
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22364..22912
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I6K2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB41006.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
Rubrerythrin
L3_072_000M1_scaffold_126_25
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23054..23872
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6ISR5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB41007.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
hypothetical protein
L3_072_000M1_scaffold_126_26
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23909..25021)
DNA (1113bp) protein (371aa)
Sporulation protein YqfD n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HT37_9FIRM
Sporulation protein YqfD {ECO:0000313|EMBL:CDB41008.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
sporulation protein YqfD
L3_072_000M1_scaffold_126_27
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25072..25338)
DNA (267bp) protein (89aa)
Putative sporulation protein YqfC n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I3E6_9FIRM
Putative sporulation protein YqfC {ECO:0000313|EMBL:CDB41009.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
hypothetical protein
L3_072_000M1_scaffold_126_28
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25454..26518
DNA (1065bp) protein (355aa)
Sporulation integral membrane protein YlbJ n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HVK2_9FIRM
Sporulation integral membrane protein YlbJ {ECO:0000313|EMBL:CDB41010.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
putative membrane protein
L3_072_000M1_scaffold_126_29
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26551..26769
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I6K9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB41011.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
hypothetical protein
L3_072_000M1_scaffold_126_30
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26855..28060
DNA (1206bp) protein (402aa)
Alcohol dehydrogenase class IV n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6ISR7_9FIRM
Alcohol dehydrogenase class IV {ECO:0000313|EMBL:CDB41012.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
alcohol dehydrogenase
Displaying items 1-30 of 122 in total

View Taxonomy