ggKbase home page

L3_072_000M1_scaffold_167

Search features with annotation key words

Displaying items 1-30 of 80 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_167_1
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..166
DNA (165bp) protein (55aa)
Peptidase M16 family n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I7V6_9FIRM
Peptidase M16 family {ECO:0000313|EMBL:CDB42534.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
L3_072_000M1_scaffold_167_2
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(241..828)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I784_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB41281.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
hypothetical protein
L3_072_000M1_scaffold_167_3
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(830..1255)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HW58_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB41280.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
hypothetical protein
L3_072_000M1_scaffold_167_4
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1383..2204
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I454_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB41279.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
HAD-superfamily hydrolase, subfamily IIB
L3_072_000M1_scaffold_167_5
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2264..2650)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HTS8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB41278.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
hypothetical protein
L3_072_000M1_scaffold_167_6
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2663..3757)
DNA (1095bp) protein (365aa)
GTP-binding protein YchF n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6ITE8_9FIRM
GTP-binding protein YchF {ECO:0000313|EMBL:CDB41277.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
GTP-binding protein YchF
L3_072_000M1_scaffold_167_7
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3944..4621
DNA (678bp) protein (226aa)
ThiF family protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I444_9FIRM
ThiF family protein {ECO:0000313|EMBL:CDB41269.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
yrvM; putative protein YrvM
L3_072_000M1_scaffold_167_8
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4665..6182
DNA (1518bp) protein (506aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HTR8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB41268.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
hypothetical protein
L3_072_000M1_scaffold_167_9
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6234..7604)
DNA (1371bp) protein (457aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6ITD8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB41267.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
hypothetical protein
L3_072_000M1_scaffold_167_10
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7601..9124)
DNA (1524bp) protein (508aa)
H+-glucitol symporter n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I771_9FIRM
H+-glucitol symporter {ECO:0000313|EMBL:CDB41266.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
H+-glucitol symporter
L3_072_000M1_scaffold_167_11
unknown

Not on your lists

9214..9306
DNA (93bp) protein (31aa)

This feature has no annotations

L3_072_000M1_scaffold_167_12
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9332..10399
DNA (1068bp) protein (356aa)
Oxidoreductase domain protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HW44_9FIRM
Oxidoreductase domain protein {ECO:0000313|EMBL:CDB41265.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
oxidoreductase
L3_072_000M1_scaffold_167_13
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10484..10867
DNA (384bp) protein (128aa)
Transcriptional regulator BadM/Rrf2 family n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I438_9FIRM
Transcriptional regulator BadM/Rrf2 family {ECO:0000313|EMBL:CDB41264.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
transcriptional regulator, BadM/Rrf2 family
L3_072_000M1_scaffold_167_14
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10970..12166
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HTR3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB41263.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
hypothetical protein
L3_072_000M1_scaffold_167_15
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12242..15100
DNA (2859bp) protein (953aa)
lytC; N-acetylmuramoyl-L-alanine amidase LytC (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6ITD1_9FIRM
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:CDB41262.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
L3_072_000M1_scaffold_167_16
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15082..15501)
DNA (420bp) protein (140aa)
Predicted membrane protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I767_9FIRM
Predicted membrane protein {ECO:0000313|EMBL:CDB41261.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
Predicted membrane protein
L3_072_000M1_scaffold_167_17
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15597..17180
DNA (1584bp) protein (528aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HW40_9FIRM
integral membrane sensor signal transduction histidine kinase
L3_072_000M1_scaffold_167_18
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17193..17888
DNA (696bp) protein (232aa)
Transcriptional regulatory protein ResD n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I432_9FIRM
Transcriptional regulatory protein ResD {ECO:0000313|EMBL:CDB41259.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
L3_072_000M1_scaffold_167_19
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17929..18780)
DNA (852bp) protein (284aa)
LacX protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HTQ8_9FIRM
LacX protein {ECO:0000313|EMBL:CDB41258.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
aldose 1-epimerase
L3_072_000M1_scaffold_167_20
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18887..19327
DNA (441bp) protein (147aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169};; Type II DHQase {ECO:0000256|HAMAP-Rule:MF_00169}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
3-dehydroquinate dehydratase, type ii (EC:4.2.1.10)
3-dehydroquinate dehydratase n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6ITC6_9FIRM
L3_072_000M1_scaffold_167_21
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19417..20328
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I763_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB41256.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
hypothetical protein
L3_072_000M1_scaffold_167_22
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20279..20866
DNA (588bp) protein (196aa)
DnaJ domain protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HW36_9FIRM
DnaJ domain protein {ECO:0000313|EMBL:CDB41255.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
DnaJ related protein
L3_072_000M1_scaffold_167_23
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20881..21426
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I427_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB41254.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
hypothetical protein
L3_072_000M1_scaffold_167_24
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21497..22780)
DNA (1284bp) protein (428aa)
MiaB-like protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HTQ4_9FIRM
MiaB-like protein {ECO:0000313|EMBL:CDB41253.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
MiaB-like tRNA modifying enzyme
L3_072_000M1_scaffold_167_25
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22941..24095
DNA (1155bp) protein (385aa)
serine-type d-ala-d-ala carboxypeptidase (EC:3.4.16.4)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6ITC1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB41252.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
L3_072_000M1_scaffold_167_26
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24269..25006
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I759_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB41251.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
hypothetical protein
L3_072_000M1_scaffold_167_27
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25003..25818
DNA (816bp) protein (272aa)
rlmA; ribosomal RNA large subunit methyltransferase A (EC:2.1.1.187)
Putative ribosomal RNA large subunit methyltransferase A n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HW32_9FIRM
Putative ribosomal RNA large subunit methyltransferase A {ECO:0000313|EMBL:CDB41250.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
L3_072_000M1_scaffold_167_28
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25996..27093
DNA (1098bp) protein (366aa)
gck1; Gck (EC:2.7.1.45)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6I422_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB41249.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
L3_072_000M1_scaffold_167_29
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27109..27756
DNA (648bp) protein (216aa)
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6HTQ0_9FIRM
2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase {ECO:0000313|EMBL:CDB41248.1}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
L3_072_000M1_scaffold_167_30
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27790..29061
DNA (1272bp) protein (424aa)
GTPase Obg n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6ITB2_9FIRM
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
GTP-binding protein Obg/CgtA
Displaying items 1-30 of 80 in total

View Taxonomy