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L3_072_000M1_scaffold_47

Search features with annotation key words

Displaying items 1-30 of 121 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_47_1
Clostridium sp. CAG:264, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

146..697
DNA (552bp) protein (184aa)
Fructose-2,6-bisphosphatase (EC:5.4.2.1)
Phosphoglycerate mutase family protein n=1 Tax=Clostridium sp. CAG:264 RepID=R5K0C8_9CLOT
Phosphoglycerate mutase family protein {ECO:0000313|EMBL:CCY60173.1}; TaxID=1262786 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:264.;"
L3_072_000M1_scaffold_47_2
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

765..1211
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VDR3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO58325.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
hypothetical protein
L3_072_000M1_scaffold_47_3
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1272..1748
DNA (477bp) protein (159aa)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
dfrD_2; dihydrofolate reductase, DfrD_2 (EC:1.5.1.3)
Dihydrofolate reductase n=1 Tax=Clostridium sp. L2-50 RepID=A7VDR2_9CLOT
L3_072_000M1_scaffold_47_4
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1764..3131
DNA (1368bp) protein (456aa)
MATE efflux family protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VDR1_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:EDO58323.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
putative efflux protein, MATE family
L3_072_000M1_scaffold_47_5
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3159..4496)
DNA (1338bp) protein (446aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VDR0_9CLOT
Signal transduction histidine kinase
L3_072_000M1_scaffold_47_6
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4638..5321)
DNA (684bp) protein (228aa)
Response regulator receiver domain protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VDQ9_9CLOT
Response regulator receiver domain protein {ECO:0000313|EMBL:EDO58321.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
two component transcriptional regulator, winged helix family
L3_072_000M1_scaffold_47_7
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5577..6116)
DNA (540bp) protein (180aa)
UBA/TS-N domain protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VDQ8_9CLOT
UBA/TS-N domain protein {ECO:0000313|EMBL:EDO58320.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
UBA/TS-N domain.
L3_072_000M1_scaffold_47_8
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6228..7031)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VDQ7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO58319.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
L3_072_000M1_scaffold_47_9
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7107..9611)
DNA (2505bp) protein (835aa)
Fibronectin type III domain protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VDQ6_9CLOT
Fibronectin type III domain protein {ECO:0000313|EMBL:EDO58318.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
hypothetical protein
L3_072_000M1_scaffold_47_10
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(9827..11569)
DNA (1743bp) protein (581aa)
Aspartate--tRNA ligase {ECO:0000313|EMBL:EDO58317.1}; EC=6.1.1.12 {ECO:0000313|EMBL:EDO58317.1};; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartate--tRNA ligase n=1 Tax=Clostridium sp. L2-50 RepID=A7VDQ5_9CLOT
L3_072_000M1_scaffold_47_11
Clostridium sp. CAG:264, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(11593..12843)
DNA (1251bp) protein (417aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1262786 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:264.;"
histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase n=1 Tax=Clostridium sp. CAG:264 RepID=R5K0D1_9CLOT
L3_072_000M1_scaffold_47_12
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12885..13505)
DNA (621bp) protein (207aa)
HDIG domain protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VDQ3_9CLOT
HDIG domain protein {ECO:0000313|EMBL:EDO58315.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
uncharacterized domain HDIG
L3_072_000M1_scaffold_47_13
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13502..14995)
DNA (1494bp) protein (498aa)
Coproporphyrinogen dehydrogenase HemZ {ECO:0000313|EMBL:EDO58314.1}; EC=1.3.99.22 {ECO:0000313|EMBL:EDO58314.1};; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
Coproporphyrinogen III oxidase and related Fe-S oxidoreductases (EC:1.3.99.22)
Coproporphyrinogen dehydrogenase HemZ n=1 Tax=Clostridium sp. L2-50 RepID=A7VDQ2_9CLOT
L3_072_000M1_scaffold_47_14
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15020..15652)
DNA (633bp) protein (211aa)
Metallo-beta-lactamase domain protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VDQ1_9CLOT
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EDO58313.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
Zn-dependent hydrolases, including glyoxylases
L3_072_000M1_scaffold_47_15
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15662..18004)
DNA (2343bp) protein (781aa)
(p)ppGpp synthetase, RelA/SpoT family (EC:2.7.6.5)
RelA/SpoT family protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VDQ0_9CLOT
RelA/SpoT family protein {ECO:0000313|EMBL:EDO58312.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
L3_072_000M1_scaffold_47_16
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18118..18642)
DNA (525bp) protein (175aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084255};; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
adenine phosphoribosyltransferase (EC:2.4.2.7)
Adenine phosphoribosyltransferase n=1 Tax=Clostridium sp. L2-50 RepID=A7VDP9_9CLOT
L3_072_000M1_scaffold_47_17
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18734..20611)
DNA (1878bp) protein (626aa)
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:EDO58310.1}; EC=3.1.-.- {ECO:0000313|EMBL:EDO58310.1};; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
exonuclease RecJ (EC:3.1.-.-)
Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Clostridium sp. L2-50 RepID=A7VDP8_9CLOT
L3_072_000M1_scaffold_47_18
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20824..21171
DNA (348bp) protein (116aa)
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VDP7_9CLOT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EDO58309.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
hypothetical protein
L3_072_000M1_scaffold_47_19
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21278..21769)
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VDP6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO58308.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
hypothetical protein
L3_072_000M1_scaffold_47_20
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21837..22841)
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VDP5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO58307.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
GDSL family lipase
L3_072_000M1_scaffold_47_21
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23186..24187
DNA (1002bp) protein (334aa)
Aldose 1-epimerase n=1 Tax=Clostridium sp. L2-50 RepID=A7VDP4_9CLOT
Aldose 1-epimerase {ECO:0000313|EMBL:EDO58306.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
Galactose mutarotase and related enzymes
L3_072_000M1_scaffold_47_22
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24487..25251)
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VDP3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO58305.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
hypothetical protein
L3_072_000M1_scaffold_47_23
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25536..28019
DNA (2484bp) protein (828aa)
cellobiose phosphorylase (EC:2.4.1.20)
Glycosyltransferase family 36 n=1 Tax=Clostridium sp. L2-50 RepID=A7VDP1_9CLOT
Glycosyltransferase family 36 {ECO:0000313|EMBL:EDO58303.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
L3_072_000M1_scaffold_47_24
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28140..30611)
DNA (2472bp) protein (824aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EDO58302.1}; EC=2.4.-.- {ECO:0000313|EMBL:EDO58302.1};; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
Glycosyltransferase, group 2 family protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VDP0_9CLOT
family 2 glycosyl transferase
L3_072_000M1_scaffold_47_25
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30837..31787
DNA (951bp) protein (317aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EDO58301.1}; EC=2.4.-.- {ECO:0000313|EMBL:EDO58301.1};; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
Glycosyltransferase, group 2 family protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VDN9_9CLOT
Glycosyltransferases involved in cell wall biogenesis
L3_072_000M1_scaffold_47_26
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31809..34487
DNA (2679bp) protein (893aa)
Uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VDN8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO58300.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
hypothetical protein
L3_072_000M1_scaffold_47_27
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34524..36905
DNA (2382bp) protein (794aa)
Parallel beta-helix repeat protein (3 repeats) n=1 Tax=Clostridium sp. L2-50 RepID=A7VDN7_9CLOT
Parallel beta-helix repeat protein (3 repeats) {ECO:0000313|EMBL:EDO58299.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
hypothetical protein
L3_072_000M1_scaffold_47_28
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37720..40164)
DNA (2445bp) protein (815aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
glycogen/starch/alpha-glucan phosphorylases (EC:2.4.1.1)
Phosphorylase n=1 Tax=Clostridium sp. L2-50 RepID=A7VDN6_9CLOT
L3_072_000M1_scaffold_47_29
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(40520..41320)
DNA (801bp) protein (267aa)
DnaJ domain protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VDN5_9CLOT
DnaJ domain protein {ECO:0000313|EMBL:EDO58297.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
DnaJ-class molecular chaperone with C-terminal Zn finger domain
L3_072_000M1_scaffold_47_30
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(41321..42232)
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VDN4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO58296.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
hypothetical protein
Displaying items 1-30 of 121 in total

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