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L3_072_000M1_scaffold_59

Search features with annotation key words

Displaying items 1-30 of 279 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_59_1
Clostridium sp. CAG:264, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

797..973
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:264 RepID=R5KJI9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY61271.1}; TaxID=1262786 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:264.;"
hypothetical protein
L3_072_000M1_scaffold_59_2
Clostridium sp. CAG:264, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


1129..1419
DNA (291bp) protein (97aa)
30S ribosomal protein S6 n=2 Tax=Clostridium RepID=A7VC86_9CLOT
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360}; TaxID=1262786 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:264.;"
SSU ribosomal protein S6P
L3_072_000M1_scaffold_59_3
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1435..1875
DNA (441bp) protein (147aa)
Single-stranded DNA-binding protein n=2 Tax=Clostridium RepID=A7VC87_9CLOT
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
single-strand binding protein
L3_072_000M1_scaffold_59_4
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


1893..2156
DNA (264bp) protein (88aa)
30S ribosomal protein S18 n=2 Tax=Clostridium RepID=A7VC88_9CLOT
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
SSU ribosomal protein S18P
L3_072_000M1_scaffold_59_5
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2458..3168
DNA (711bp) protein (237aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VC89_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDO58486.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
multidrug ABC transporter ATPase
L3_072_000M1_scaffold_59_6
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3346..4155
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VC90_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO58487.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
L3_072_000M1_scaffold_59_7
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4375..5706
DNA (1332bp) protein (444aa)
Glutamine synthetase, type I {ECO:0000313|EMBL:EDO58488.1}; EC=6.3.1.2 {ECO:0000313|EMBL:EDO58488.1};; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
glutamine synthetase, type I (EC:6.3.1.2)
Glutamine synthetase, type I n=2 Tax=Clostridium RepID=A7VC91_9CLOT
L3_072_000M1_scaffold_59_8
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5857..6408
DNA (552bp) protein (184aa)
ANTAR domain protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VC92_9CLOT
ANTAR domain protein {ECO:0000313|EMBL:EDO58489.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
ANTAR domain-containing protein
L3_072_000M1_scaffold_59_9
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6421..7257
DNA (837bp) protein (279aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
diaminopimelate epimerase (EC:5.1.1.7)
Diaminopimelate epimerase n=1 Tax=Clostridium sp. L2-50 RepID=A7VC93_9CLOT
L3_072_000M1_scaffold_59_10
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7269..8486
DNA (1218bp) protein (406aa)
LL-diaminopimelate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642}; Short=DAP-AT {ECO:0000256|HAMAP-Rule:MF_01642};; Short=DAP-aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642};; Short=LL-DAP-aminotransferase {ECO:0000256|HAMAP-Rule:MF_01642};; EC=2.6.1.83 {ECO:0000256|HAMAP-Rule:MF_01642};; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
LL-diaminopimelate aminotransferase apoenzyme (EC:2.6.1.83)
LL-diaminopimelate aminotransferase n=1 Tax=Clostridium sp. L2-50 RepID=A7VC94_9CLOT
L3_072_000M1_scaffold_59_11
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8528..9994
DNA (1467bp) protein (489aa)
Glycosidases (EC:3.2.1.1)
Alpha amylase, catalytic domain protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VC95_9CLOT
Alpha amylase, catalytic domain protein {ECO:0000313|EMBL:EDO58492.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
L3_072_000M1_scaffold_59_12
Clostridium sp. CAG:264, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10097..10408
DNA (312bp) protein (104aa)
TrpR family protein YerC/YecD n=2 Tax=Clostridium RepID=A7VC96_9CLOT
TrpR family protein YerC/YecD {ECO:0000313|EMBL:CCY61260.1}; TaxID=1262786 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:264.;"
TrpR-related protein YerC/YecD
L3_072_000M1_scaffold_59_13
unknown

Not on your lists

10438..10593
DNA (156bp) protein (52aa)

This feature has no annotations

L3_072_000M1_scaffold_59_14
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10793..12280)
DNA (1488bp) protein (496aa)
Galactose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; Short=Gal-1-P uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571};; EC=2.7.7.12 {ECO:0000256|HAMAP-Rule:MF_00571};; UDP-glucose--hexose-1-phosphate uridylyltransferase {ECO:0000256|HAMAP-Rule:MF_00571}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
Galactose-1-phosphate uridylyltransferase n=1 Tax=Clostridium sp. L2-50 RepID=A7VC98_9CLOT
galactose-1-phosphate uridylyltransferase
L3_072_000M1_scaffold_59_15
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12474..13754)
DNA (1281bp) protein (427aa)
GHMP kinase, N-terminal domain protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VC99_9CLOT
GHMP kinase, N-terminal domain protein {ECO:0000313|EMBL:EDO58496.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
galactokinase
L3_072_000M1_scaffold_59_16
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14022..15026
DNA (1005bp) protein (335aa)
Transcriptional regulator, LacI family n=1 Tax=Clostridium sp. L2-50 RepID=A7VCA0_9CLOT
Transcriptional regulator, LacI family {ECO:0000313|EMBL:EDO58497.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
transcriptional regulator, LacI family
L3_072_000M1_scaffold_59_17
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15093..15731
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VCA1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO58498.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
LacI family transcriptional regulator
L3_072_000M1_scaffold_59_18
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16581..17303)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VCA3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO58500.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
Domain of unknown function (DUF1836).
L3_072_000M1_scaffold_59_19
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17541..18833)
DNA (1293bp) protein (431aa)
Uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VCA4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO58501.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
Hemolysins and related proteins containing CBS domains
L3_072_000M1_scaffold_59_20
Clostridium sp. CAG:264, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19100..19288
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:264 RepID=R5KJH0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY61251.1}; TaxID=1262786 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:264.;"
hypothetical protein
L3_072_000M1_scaffold_59_21
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19456..21087
DNA (1632bp) protein (544aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VCA7_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDO58504.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
ATPase components of ABC transporters with duplicated ATPase domains
L3_072_000M1_scaffold_59_22
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21132..22115
DNA (984bp) protein (328aa)
CAAX amino terminal protease family protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VCA8_9CLOT
CAAX amino terminal protease family protein {ECO:0000313|EMBL:EDO58505.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
CAAX amino terminal protease family protein
L3_072_000M1_scaffold_59_23
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22385..23392)
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VCA9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO58506.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
L3_072_000M1_scaffold_59_24
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24054..25487
DNA (1434bp) protein (478aa)
Uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VCB1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO58508.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
hypothetical protein
L3_072_000M1_scaffold_59_25
Clostridium sp. CAG:264, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25592..26536
DNA (945bp) protein (315aa)
ABC transporter permease protein n=1 Tax=Clostridium sp. CAG:264 RepID=R5KJG5_9CLOT
ABC transporter permease protein {ECO:0000313|EMBL:CCY61246.1}; TaxID=1262786 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:264.;"
ABC-type sugar transport systems, permease components
L3_072_000M1_scaffold_59_26
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26546..27406
DNA (861bp) protein (287aa)
ABC transporter, permease protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VCB3_9CLOT
ABC transporter, permease protein {ECO:0000313|EMBL:EDO58510.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
sugar ABC transporter permease
L3_072_000M1_scaffold_59_27
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27539..28291
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VCB4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO58511.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
Predicted integral membrane protein
L3_072_000M1_scaffold_59_28
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28414..29421
DNA (1008bp) protein (336aa)
deoxyguanosinetriphosphate triphosphohydrolase, putative (EC:3.1.5.1)
Putative dGTPase n=1 Tax=Clostridium sp. L2-50 RepID=A7VCB5_9CLOT
Deoxyguanosinetriphosphate triphosphohydrolase-like protein {ECO:0000256|HAMAP-Rule:MF_01212}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
L3_072_000M1_scaffold_59_29
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29580..31349
DNA (1770bp) protein (590aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
DNA primase n=1 Tax=Clostridium sp. L2-50 RepID=A7VCB6_9CLOT
DNA primase
L3_072_000M1_scaffold_59_30
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31390..32523
DNA (1134bp) protein (378aa)
RNA polymerase sigma factor SigA n=1 Tax=Clostridium sp. L2-50 RepID=A7VCB7_9CLOT
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
RpoD family RNA polymerase sigma factor
Displaying items 1-30 of 279 in total

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