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L3_072_000M1_scaffold_310

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Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_310_1
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..2232)
DNA (2232bp) protein (744aa)
Uncharacterized protein (Fragment) n=1 Tax=Clostridium sp. L2-50 RepID=A7VII7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO56650.1}; Flags: Fragment;; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
transglutaminase
L3_072_000M1_scaffold_310_2
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2234..5464)
DNA (3231bp) protein (1077aa)
Prenyltransferase and squalene oxidase repeat protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VII6_9CLOT
Prenyltransferase and squalene oxidase repeat protein {ECO:0000313|EMBL:EDO56649.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
TPR-repeat-containing protein
L3_072_000M1_scaffold_310_3
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5507..6070)
DNA (564bp) protein (188aa)
Accessory protein regulator protein B n=1 Tax=Clostridium sp. L2-50 RepID=A7VII5_9CLOT
Accessory protein regulator protein B {ECO:0000313|EMBL:EDO56648.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
Membrane protein putatively involved in post-translational modification of the autoinducing quorum-sensing peptide
L3_072_000M1_scaffold_310_4
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6086..6217)
DNA (132bp) protein (44aa)
Uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VII4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO56647.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
L3_072_000M1_scaffold_310_5
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6474..6779
DNA (306bp) protein (102aa)
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VII3_9CLOT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EDO56646.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
Predicted transcriptional regulators
L3_072_000M1_scaffold_310_6
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6926..8167)
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VII2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO56645.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
hypothetical protein
L3_072_000M1_scaffold_310_7
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8174..8923)
DNA (750bp) protein (250aa)
LytTr DNA-binding domain protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VII1_9CLOT
LytTr DNA-binding domain protein {ECO:0000313|EMBL:EDO56644.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
LytTR family two component transcriptional regulator
L3_072_000M1_scaffold_310_8
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9495..12140)
DNA (2646bp) protein (882aa)
Pyruvate, phosphate dikinase {ECO:0000313|EMBL:EDO56643.1}; EC=2.7.9.1 {ECO:0000313|EMBL:EDO56643.1};; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
pyruvate, phosphate dikinase (EC:2.7.9.1)
Pyruvate, phosphate dikinase n=1 Tax=Clostridium sp. L2-50 RepID=A7VII0_9CLOT
L3_072_000M1_scaffold_310_9
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(12420..13817)
DNA (1398bp) protein (466aa)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
Glycine--tRNA ligase n=1 Tax=Clostridium sp. L2-50 RepID=A7VIH9_9CLOT
glycyl-tRNA synthetase
L3_072_000M1_scaffold_310_10
Clostridium sp. CAG:264, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13883..14626)
DNA (744bp) protein (248aa)
DNA repair protein RecO n=1 Tax=Clostridium sp. CAG:264 RepID=R5K483_9CLOT
DNA repair protein RecO {ECO:0000256|HAMAP-Rule:MF_00201, ECO:0000256|SAAS:SAAS00018750}; Recombination protein O {ECO:0000256|HAMAP-Rule:MF_00201}; TaxID=1262786 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:264.;"
DNA replication and repair protein RecO
L3_072_000M1_scaffold_310_11
Clostridium sp. CAG:264, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14623..15528)
DNA (906bp) protein (302aa)
GTPase Era n=2 Tax=Clostridium RepID=A7VIH7_9CLOT
GTPase Era {ECO:0000256|HAMAP-Rule:MF_00367, ECO:0000256|SAAS:SAAS00085723}; TaxID=1262786 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:264.;"
GTP-binding protein Era
L3_072_000M1_scaffold_310_12
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15650..18580)
DNA (2931bp) protein (977aa)
Peptidase M16 inactive domain protein {ECO:0000313|EMBL:EDO56639.1}; EC=3.4.24.- {ECO:0000313|EMBL:EDO56639.1};; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
Peptidase M16 inactive domain protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VIH6_9CLOT
Predicted Zn-dependent peptidases, insulinase-like
L3_072_000M1_scaffold_310_13
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18594..19010)
DNA (417bp) protein (139aa)
Cytidine deaminase {ECO:0000313|EMBL:EDO56638.1}; EC=3.5.4.5 {ECO:0000313|EMBL:EDO56638.1};; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
Cytidine deaminase n=1 Tax=Clostridium sp. L2-50 RepID=A7VIH5_9CLOT
cytidine deaminase
L3_072_000M1_scaffold_310_14
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19233..20816)
DNA (1584bp) protein (528aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VIH4_9CLOT
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EDO56637.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
L3_072_000M1_scaffold_310_15
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20767..21471)
DNA (705bp) protein (235aa)
Response regulator receiver domain protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VIH3_9CLOT
Response regulator receiver domain protein {ECO:0000313|EMBL:EDO56636.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
transcriptional regulator
L3_072_000M1_scaffold_310_16
Clostridium sp. CAG:264, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21579..22844)
DNA (1266bp) protein (422aa)
Glycerate kinase n=1 Tax=Clostridium sp. CAG:264 RepID=R5K917_9CLOT
Glycerate kinase {ECO:0000313|EMBL:CCY61524.1}; TaxID=1262786 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:264.;"
putative glycerate kinase
L3_072_000M1_scaffold_310_17
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22878..23441)
DNA (564bp) protein (188aa)
Peptidase, S54 family {ECO:0000313|EMBL:EDO56633.1}; EC=3.4.21.- {ECO:0000313|EMBL:EDO56633.1};; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
Peptidase, S54 family n=1 Tax=Clostridium sp. L2-50 RepID=A7VIH0_9CLOT
peptidase
L3_072_000M1_scaffold_310_18
Clostridium sp. CAG:264, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23736..25088)
DNA (1353bp) protein (451aa)
patA; putrescine aminotransferase PatA (EC:2.6.1.82)
Putative putrescine aminotransferase n=2 Tax=Clostridium RepID=A7VIG9_9CLOT
Putative putrescine aminotransferase {ECO:0000313|EMBL:CCY61522.1}; TaxID=1262786 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:264.;"
L3_072_000M1_scaffold_310_19
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25423..26901)
DNA (1479bp) protein (493aa)
Aldehyde dehydrogenase (NAD) family protein {ECO:0000313|EMBL:EDO56631.1}; EC=1.2.1.- {ECO:0000313|EMBL:EDO56631.1};; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
Aldehyde dehydrogenase (NAD) family protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VIG8_9CLOT
Aldehyde Dehydrogenase
L3_072_000M1_scaffold_310_20
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26953..28017)
DNA (1065bp) protein (355aa)
ABC transporter, solute-binding protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VIG7_9CLOT
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EDO56630.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
binding-protein-dependent transport system inner membrane protein
L3_072_000M1_scaffold_310_21
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28092..28892)
DNA (801bp) protein (267aa)
ABC transporter, permease protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VIG6_9CLOT
ABC transporter, permease protein {ECO:0000313|EMBL:EDO56629.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
binding-protein-dependent transport system inner membrane protein
L3_072_000M1_scaffold_310_22
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28896..29762)
DNA (867bp) protein (289aa)
ABC transporter, permease protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VIG5_9CLOT
ABC transporter, permease protein {ECO:0000313|EMBL:EDO56628.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
binding-protein-dependent transport system inner membrane protein
L3_072_000M1_scaffold_310_23
Clostridium sp. CAG:264, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29776..30912)
DNA (1137bp) protein (379aa)
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000256|HAMAP-Rule:MF_01726}; EC=3.6.3.31 {ECO:0000256|HAMAP-Rule:MF_01726};; TaxID=1262786 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:264.;"
Polyamine ABC transporter ATP-binding protein n=1 Tax=Clostridium sp. CAG:264 RepID=R5KKR9_9CLOT
spermidine/putrescine ABC transporter ATPase
L3_072_000M1_scaffold_310_24
Clostridium sp. CAG:264, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30940..31287)
DNA (348bp) protein (116aa)
Nitrogen regulatory protein P-II n=2 Tax=Clostridium RepID=A7VIG3_9CLOT
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:CCY61516.1}; TaxID=1262786 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:264.;"
nitrogen regulatory protein P-II 2
L3_072_000M1_scaffold_310_25
Clostridium sp. CAG:264, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31445..32194)
DNA (750bp) protein (250aa)
Transcriptional regulator LuxR family n=1 Tax=Clostridium sp. CAG:264 RepID=R5K476_9CLOT
Transcriptional regulator LuxR family {ECO:0000313|EMBL:CCY61515.1}; TaxID=1262786 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:264.;"
LuxR family ATP-dependent transcriptional regulator
L3_072_000M1_scaffold_310_26
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32375..33106)
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VIG0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO56623.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
hypothetical protein
L3_072_000M1_scaffold_310_27
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33165..33401)
DNA (237bp) protein (79aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis XB6B4 RepID=D4L0V7_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL13247.1}; TaxID=718255 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis XB6B4.;"
L3_072_000M1_scaffold_310_28
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33418..36981)
DNA (3564bp) protein (1188aa)
Topoisomerase-like C4 zinc finger-containing protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7CAJ3_9CLOT
Topoisomerase-like C4 zinc finger-containing protein {ECO:0000313|EMBL:CDD75204.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
topoisomerase-like C4 zinc finger-containing protein
L3_072_000M1_scaffold_310_29
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37001..38008)
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7CB82_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD75205.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
conserved hypothetical protein
L3_072_000M1_scaffold_310_30
Ruminococcus sp. CAG:9, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38005..38394)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:9 RepID=R7CFG8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD76964.1}; TaxID=1262967 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:9.;"
hypothetical protein
Displaying items 1-30 of 44 in total

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