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L3_072_000M1_scaffold_378

Search features with annotation key words

Displaying items 1-30 of 95 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_378_1
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(149..823)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VII8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO56497.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
Protein of unknown function DUF88.
L3_072_000M1_scaffold_378_2
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1069..2778)
DNA (1710bp) protein (570aa)
Trypsin n=1 Tax=Clostridium sp. L2-50 RepID=A7VII9_9CLOT
Trypsin {ECO:0000313|EMBL:EDO56498.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
L3_072_000M1_scaffold_378_3
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3058..3330
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VIJ0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO56499.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
hypothetical protein
L3_072_000M1_scaffold_378_4
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3332..3970
DNA (639bp) protein (213aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VIJ1_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDO56500.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
ABC-type multidrug transport system, ATPase component
L3_072_000M1_scaffold_378_5
Clostridium sp. CAG:264, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3995..5113
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:264 RepID=R5KFA2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY59841.1}; TaxID=1262786 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:264.;"
L3_072_000M1_scaffold_378_6
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5135..6166
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VIJ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO56502.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
hypothetical protein
L3_072_000M1_scaffold_378_7
Clostridium sp. CAG:264, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6425..7045)
DNA (621bp) protein (207aa)
YigZ family protein n=1 Tax=Clostridium sp. CAG:264 RepID=R5K423_9CLOT
YigZ family protein {ECO:0000313|EMBL:CCY59839.1}; TaxID=1262786 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:264.;"
conserved hypothetical protein TIGR00257
L3_072_000M1_scaffold_378_8
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7058..7525)
DNA (468bp) protein (156aa)
Transcriptional repressor NrdR n=1 Tax=Clostridium sp. L2-50 RepID=A7VIJ5_9CLOT
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
transcriptional regulator NrdR
L3_072_000M1_scaffold_378_9
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7582..7830)
DNA (249bp) protein (83aa)
Sporulation protein, YlmC/YmxH family n=1 Tax=Clostridium sp. L2-50 RepID=A7VIJ6_9CLOT
Sporulation protein, YlmC/YmxH family {ECO:0000313|EMBL:EDO56505.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
sporulation protein, YlmC/YmxH family
L3_072_000M1_scaffold_378_10
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7971..8762)
DNA (792bp) protein (264aa)
Electron transport complex, RnfABCDGE type, B subunit n=1 Tax=Clostridium sp. L2-50 RepID=A7VIJ7_9CLOT
Electron transport complex, RnfABCDGE type, B subunit {ECO:0000313|EMBL:EDO56506.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
electron transport complex, RnfABCDGE type, B subunit
L3_072_000M1_scaffold_378_11
Clostridium sp. CAG:264, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8775..9347)
DNA (573bp) protein (191aa)
Electron transport complex RnfABCDGE type A subunit n=1 Tax=Clostridium sp. CAG:264 RepID=R5JZF5_9CLOT
Electron transport complex subunit A {ECO:0000256|HAMAP-Rule:MF_00459}; TaxID=1262786 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:264.;"
electron transport complex, RnfABCDGE type, A subunit
L3_072_000M1_scaffold_378_12
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9347..10750)
DNA (1404bp) protein (468aa)
Electron transport complex, RnfABCDGE type, E subunit n=1 Tax=Clostridium sp. L2-50 RepID=A7VIJ9_9CLOT
Electron transport complex subunit E {ECO:0000256|HAMAP-Rule:MF_00478}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
electron transport complex, RnfABCDGE type, E subunit
L3_072_000M1_scaffold_378_13
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10750..12339)
DNA (1590bp) protein (530aa)
Electron transport complex, RnfABCDGE type, D subunit n=1 Tax=Clostridium sp. L2-50 RepID=A7VIK0_9CLOT
Electron transport complex, RnfABCDGE type, D subunit {ECO:0000313|EMBL:EDO56509.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
electron transport complex, RnfABCDGE type, D subunit
L3_072_000M1_scaffold_378_14
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12351..13676)
DNA (1326bp) protein (442aa)
Electron transport complex, RnfABCDGE type, C subunit n=1 Tax=Clostridium sp. L2-50 RepID=A7VIK1_9CLOT
Electron transport complex subunit C {ECO:0000256|HAMAP-Rule:MF_00461}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
electron transport complex, RnfABCDGE type, C subunit
L3_072_000M1_scaffold_378_15
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13773..14339)
DNA (567bp) protein (189aa)
Predicted membrane protein (EC:2.5.1.30)
Heptaprenyl diphosphate synthase component I n=1 Tax=Clostridium sp. L2-50 RepID=A7VIK2_9CLOT
Heptaprenyl diphosphate synthase component I {ECO:0000313|EMBL:EDO56511.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
L3_072_000M1_scaffold_378_16
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14384..14749)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VIK3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO56512.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
hypothetical protein
L3_072_000M1_scaffold_378_17
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14746..15846)
DNA (1101bp) protein (367aa)
ApbE family protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VIK4_9CLOT
ApbE family protein {ECO:0000313|EMBL:EDO56513.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
Membrane-associated lipoprotein involved in thiamine biosynthesis
L3_072_000M1_scaffold_378_18
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16009..16647)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VIK5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO56514.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
L3_072_000M1_scaffold_378_19
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16726..18513)
DNA (1788bp) protein (596aa)
RelA/SpoT domain protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VIK6_9CLOT
RelA/SpoT domain protein {ECO:0000313|EMBL:EDO56515.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
hypothetical protein
L3_072_000M1_scaffold_378_20
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18753..20684
DNA (1932bp) protein (644aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VIK7_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDO56516.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
ATPase components of ABC transporters with duplicated ATPase domains
L3_072_000M1_scaffold_378_21
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20834..23164)
DNA (2331bp) protein (777aa)
Uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VIK8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO56517.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
YHS domain protein
L3_072_000M1_scaffold_378_22
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23271..24197)
DNA (927bp) protein (309aa)
Homoserine O-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084556}; EC=2.3.1.46 {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084596};; Homoserine O-transsuccinylase {ECO:0000256|HAMAP-Rule:MF_00295}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
homoserine O-succinyltransferase (EC:2.3.1.46)
Homoserine O-succinyltransferase n=1 Tax=Clostridium sp. L2-50 RepID=A7VIK9_9CLOT
L3_072_000M1_scaffold_378_23
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24249..26210)
DNA (1962bp) protein (654aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
DNA ligase, NAD-dependent (EC:6.5.1.2)
DNA ligase n=1 Tax=Clostridium sp. L2-50 RepID=A7VIL0_9CLOT
L3_072_000M1_scaffold_378_24
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26180..26998)
DNA (819bp) protein (273aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
ribosomal large subunit pseudouridine synthase F (EC:5.4.99.12 5.4.99.-)
Pseudouridine synthase n=1 Tax=Clostridium sp. L2-50 RepID=A7VIL1_9CLOT
L3_072_000M1_scaffold_378_25
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27264..27731
DNA (468bp) protein (156aa)
Transcriptional regulator, AsnC family n=1 Tax=Clostridium sp. L2-50 RepID=A7VIL2_9CLOT
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:EDO56521.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
transcriptional regulator, AsnC family
L3_072_000M1_scaffold_378_26
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27908..28639)
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VIL3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO56522.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
hypothetical protein
L3_072_000M1_scaffold_378_27
Clostridium sp. CAG:264, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29310..30764)
DNA (1455bp) protein (485aa)
Putative permease n=1 Tax=Clostridium sp. CAG:264 RepID=R5KH03_9CLOT
Putative permease {ECO:0000313|EMBL:CCY60267.1}; TaxID=1262786 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:264.;"
Permeases
L3_072_000M1_scaffold_378_28
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30931..31749)
DNA (819bp) protein (273aa)
HAD hydrolase, family IIB n=1 Tax=Clostridium sp. L2-50 RepID=A7VIL5_9CLOT
HAD hydrolase, family IIB {ECO:0000313|EMBL:EDO56524.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
HAD-superfamily hydrolase, subfamily IIB
L3_072_000M1_scaffold_378_29
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31926..32504
DNA (579bp) protein (193aa)
Transcriptional regulator, TetR family n=1 Tax=Clostridium sp. L2-50 RepID=A7VIL6_9CLOT
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EDO56525.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
Transcriptional regulator
L3_072_000M1_scaffold_378_30
Clostridium sp. CAG:264, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32501..34045)
DNA (1545bp) protein (515aa)
Long-chain acyl-CoA synthetases (AMP-forming) (EC:6.2.1.3)
AMP-binding enzyme n=1 Tax=Clostridium sp. CAG:264 RepID=R5K5B6_9CLOT
AMP-binding enzyme {ECO:0000313|EMBL:CCY60264.1}; TaxID=1262786 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:264.;"
Displaying items 1-30 of 95 in total

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