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L3_072_000M1_scaffold_554

Search features with annotation key words

Displaying items 1-30 of 66 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_554_1
Clostridium sp. CAG:510, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..352
DNA (351bp) protein (117aa)
Uncharacterized protein n=2 Tax=environmental samples RepID=R5NU12_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA67763.1}; TaxID=1262816 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:510.;"
metallo-beta-lactamase
L3_072_000M1_scaffold_554_2
unknown

Not on your lists

376..1143
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Butyrivibrio fibrisolvens RepID=UPI0003B6AD19
L3_072_000M1_scaffold_554_3
Coprococcus eutactus CAG:665, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1192..1488
DNA (297bp) protein (99aa)
Kinase PfkB family n=1 Tax=Coprococcus eutactus CAG:665 RepID=R5VMX0_9FIRM
Kinase PfkB family {ECO:0000313|EMBL:CCZ92078.1}; TaxID=1263071 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus eutactus CAG:665.;"
Sugar kinases, ribokinase family
L3_072_000M1_scaffold_554_4
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1629..2165
DNA (537bp) protein (179aa)
Fic family protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YX62_9FIRM
Fic family protein {ECO:0000313|EMBL:CDD35959.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
hypothetical protein
L3_072_000M1_scaffold_554_5
Clostridium sp. CAG:590, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2401..3099
DNA (699bp) protein (233aa)
ABC-type antimicrobial peptide transport system ATPase component n=1 Tax=Clostridium sp. CAG:590 RepID=R5EAG5_9CLOT
ABC-type antimicrobial peptide transport system ATPase component {ECO:0000313|EMBL:CCX89605.1}; TaxID=1262825 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:590.;"
ABC-type antimicrobial peptide transport system, ATPase component
L3_072_000M1_scaffold_554_6
Clostridium sp. CAG:590, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3101..5338
DNA (2238bp) protein (746aa)
Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis permease component n=1 Tax=Clostridium sp. CAG:590 RepID=R5EE75_9CLOT
Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis permease component {ECO:0000313|EMBL:CCX89604.1}; TaxID=1262825 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:590.;"
Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component
L3_072_000M1_scaffold_554_7
Coprococcus sp. CAG:131, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5372..5965
DNA (594bp) protein (198aa)
Transcriptional regulator TetR family n=1 Tax=Coprococcus sp. CAG:131 RepID=R6LAX5_9FIRM
Transcriptional regulator TetR family {ECO:0000313|EMBL:CDB80679.1}; TaxID=1262862 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus sp. CAG:131.;"
regulatory protein TetR
L3_072_000M1_scaffold_554_8
Clostridium sp. CAG:264, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5972..7246)
DNA (1275bp) protein (425aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium sp. CAG:264 RepID=R5KHE3_9CLOT
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:CCY60496.1}; TaxID=1262786 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:264.;"
signal transduction histidine kinase regulating citrate/malate metabolism
L3_072_000M1_scaffold_554_9
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7262..7996)
DNA (735bp) protein (245aa)
Response regulator receiver domain protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VG50_9CLOT
Response regulator receiver domain protein {ECO:0000313|EMBL:EDO57476.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
LytTR family transcriptional regulator
L3_072_000M1_scaffold_554_10
Clostridium sp. CAG:264, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8244..8444
DNA (201bp) protein (67aa)
Ferredoxin thioredoxin reductase catalytic beta chain n=1 Tax=Clostridium sp. CAG:264 RepID=R5K612_9CLOT
Ferredoxin thioredoxin reductase catalytic beta chain {ECO:0000313|EMBL:CCY60494.1}; TaxID=1262786 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:264.;"
Ferredoxin thioredoxin reductase catalytic beta chain.
L3_072_000M1_scaffold_554_11
Clostridium sp. CAG:264, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8640..9914
DNA (1275bp) protein (425aa)
Glucose/galactose-binding lipoprotein family protein n=1 Tax=Clostridium sp. CAG:264 RepID=R5K1B9_9CLOT
Glucose/galactose-binding lipoprotein family protein {ECO:0000313|EMBL:CCY60493.1}; TaxID=1262786 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:264.;"
monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-)
L3_072_000M1_scaffold_554_12
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10009..11517
DNA (1509bp) protein (503aa)
monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-) (EC:3.6.3.17)
ABC transporter, ATP-binding protein n=2 Tax=Clostridium RepID=A7VG54_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDO57480.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
L3_072_000M1_scaffold_554_13
Clostridium sp. CAG:264, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11536..13188
DNA (1653bp) protein (551aa)
Branched-chain amino acid ABC transporter permease protein n=1 Tax=Clostridium sp. CAG:264 RepID=R5KHB7_9CLOT
Branched-chain amino acid ABC transporter permease protein {ECO:0000313|EMBL:CCY60491.1}; TaxID=1262786 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:264.;"
galactoside ABC transporter, permease protein, putative
L3_072_000M1_scaffold_554_14
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13432..15036
DNA (1605bp) protein (535aa)
Response regulator receiver domain protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VG57_9CLOT
Response regulator receiver domain protein {ECO:0000313|EMBL:EDO57483.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
two component transcriptional regulator, AraC family
L3_072_000M1_scaffold_554_15
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15056..16951
DNA (1896bp) protein (632aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
Predicted signal transduction protein with a C-terminal ATPase domain (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VG58_9CLOT
L3_072_000M1_scaffold_554_16
Clostridium sp. CAG:264, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16938..17912
DNA (975bp) protein (325aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:264 RepID=R5K1B2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY60488.1}; TaxID=1262786 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:264.;"
monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-)
L3_072_000M1_scaffold_554_17
Clostridium sp. CAG:264, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17905..18945
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:264 RepID=R5KHR9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY60487.1}; TaxID=1262786 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:264.;"
monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-)
L3_072_000M1_scaffold_554_18
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18970..19539
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VG61_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO57487.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
hypothetical protein
L3_072_000M1_scaffold_554_19
Clostridium sp. CAG:264, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19679..21166)
DNA (1488bp) protein (496aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:264 RepID=R5K1A6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY60485.1}; TaxID=1262786 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:264.;"
hypothetical protein
L3_072_000M1_scaffold_554_20
Roseburia intestinalis CAG:13, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21387..23489
DNA (2103bp) protein (701aa)
Putative serine/threonine protein kinase n=1 Tax=Roseburia intestinalis CAG:13 RepID=R6B9R2_9FIRM
Putative serine/threonine protein kinase {ECO:0000313|EMBL:CDA55781.1}; TaxID=1263104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia intestinalis CAG:13.;"
NB-ARC domain./Protein kinase domain.
L3_072_000M1_scaffold_554_21
unknown

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23624..23785
DNA (162bp) protein (54aa)

This feature has no annotations

L3_072_000M1_scaffold_554_22
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23897..25171)
DNA (1275bp) protein (425aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5S4D8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ41836.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
L3_072_000M1_scaffold_554_23
unknown

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comp(25125..25289)
DNA (165bp) protein (55aa)

This feature has no annotations

L3_072_000M1_scaffold_554_24
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25459..26757
DNA (1299bp) protein (433aa)
Uncharacterized protein n=5 Tax=Clostridiales RepID=A5KPM5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ26287.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
L3_072_000M1_scaffold_554_25
unknown

Not on your lists

26804..27115
DNA (312bp) protein (104aa)

This feature has no annotations

L3_072_000M1_scaffold_554_26
Clostridium sp. CAG:264, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27187..28131)
DNA (945bp) protein (315aa)
CobW/P47K family protein n=1 Tax=Clostridium sp. CAG:264 RepID=R5K5Z9_9CLOT
CobW/P47K family protein {ECO:0000313|EMBL:CCY60484.1}; TaxID=1262786 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:264.;"
Putative GTPases (G3E family)
L3_072_000M1_scaffold_554_27
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28549..30105
DNA (1557bp) protein (519aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VG66_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDO57492.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
ATPase components of ABC transporters with duplicated ATPase domains
L3_072_000M1_scaffold_554_28
Clostridium sp. CAG:264, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30170..30760
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:264 RepID=R5KHR4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY60482.1}; TaxID=1262786 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:264.;"
hypothetical protein
L3_072_000M1_scaffold_554_29
Clostridium sp. CAG:264, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30787..31011
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:264 RepID=R5KHA6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY60481.1}; TaxID=1262786 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:264.;"
hypothetical protein
L3_072_000M1_scaffold_554_30
Clostridium sp. CAG:264, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31165..31725
DNA (561bp) protein (187aa)
Acetyltransferase GNAT family n=1 Tax=Clostridium sp. CAG:264 RepID=R5K1A2_9CLOT
Acetyltransferase GNAT family {ECO:0000313|EMBL:CCY60480.1}; TaxID=1262786 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:264.;"
Acetyltransferases
Displaying items 1-30 of 66 in total

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