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L3_072_000M1_scaffold_5176

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_5176_1
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

3..224
DNA (222bp) protein (74aa)
Type II S restriction-modification protein n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LSJ2_9SPIR
Type II S restriction-modification protein {ECO:0000313|EMBL:CCY75977.1}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
type IIS restriction/modification enzyme
L3_072_000M1_scaffold_5176_2
unknown

Not on your lists

163..309
DNA (147bp) protein (49aa)

This feature has no annotations

L3_072_000M1_scaffold_5176_3
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

443..622
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LA47_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY75978.1}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
hypothetical protein
L3_072_000M1_scaffold_5176_4
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(669..1475)
DNA (807bp) protein (269aa)
RNA polymerase sigma factor n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LER8_9SPIR
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
fliA; RNA polymerase sigma factor WhiG
L3_072_000M1_scaffold_5176_5
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(1828..2844)
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LQQ5_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY75347.1}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
hypothetical protein
L3_072_000M1_scaffold_5176_6
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(2944..4464)
DNA (1521bp) protein (507aa)
Uncharacterized protein n=1 Tax=Brachyspira sp. CAG:700 RepID=R5L888_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY75348.1}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
hypothetical protein
L3_072_000M1_scaffold_5176_7
unknown

Not on your lists

comp(4845..5033)
DNA (189bp) protein (63aa)

This feature has no annotations

L3_072_000M1_scaffold_5176_8
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

5290..5490
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LCY8_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY75349.1}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
hypothetical protein
L3_072_000M1_scaffold_5176_9
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

5491..6477
DNA (987bp) protein (329aa)
von Willebrand factor type A n=1 Tax=Brachyspira sp. CAG:700 RepID=R5L820_9SPIR
von Willebrand factor type A {ECO:0000313|EMBL:CCY75350.1}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
von Willebrand factor A
L3_072_000M1_scaffold_5176_10
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

6710..7141
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LQI8_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY75351.1}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
L3_072_000M1_scaffold_5176_11
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(7346..7801)
DNA (456bp) protein (152aa)
UDP-3-O-acylglucosamine N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00523}; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_00523};; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
UDP-3-O-acylglucosamine N-acyltransferase n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LQQ9_9SPIR
lpxM; myristoyl-acyl carrier protein (ACP)-dependent acyltransferase
L3_072_000M1_scaffold_5176_12
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(7755..8099)
DNA (345bp) protein (115aa)
UDP-3-O-acylglucosamine N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00523}; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_00523};; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
UDP-3-O-acylglucosamine N-acyltransferase n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LQQ9_9SPIR
UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
L3_072_000M1_scaffold_5176_13
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(8118..8540)
DNA (423bp) protein (141aa)
Outer membrane chaperone Skp (OmpH) n=1 Tax=Brachyspira sp. CAG:700 RepID=R5L893_9SPIR
Outer membrane chaperone Skp (OmpH) {ECO:0000313|EMBL:CCY75353.1}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
outer membrane chaperone Skp
L3_072_000M1_scaffold_5176_14
Brachyspira pilosicoli, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(8643..11267)
DNA (2625bp) protein (875aa)
Outer membrane protein n=1 Tax=Brachyspira pilosicoli WesB RepID=K0JN51_BRAPL
Outer membrane protein {ECO:0000313|EMBL:CCG58051.1}; TaxID=1161918 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira.;" source="Brachyspira pilosicoli WesB.;"
outer membrane protein
L3_072_000M1_scaffold_5176_15
Brachyspira murdochii, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(11293..15762)
DNA (4470bp) protein (1490aa)
Putative uncharacterized protein n=1 Tax=Brachyspira murdochii (strain ATCC 51284 / DSM 12563 / 56-150) RepID=D5UB18_BRAM5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG71891.1}; TaxID=526224 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira.;" source="Brachyspira murdochii (strain ATCC 51284 / DSM 12563 / 56-150); (Serpulina murdochii).;"
L3_072_000M1_scaffold_5176_16
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

15974..16405
DNA (432bp) protein (144aa)
Putative PTS IIA-like nitrogen-regulatory protein PtsN n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LQJ3_9SPIR
Putative PTS IIA-like nitrogen-regulatory protein PtsN {ECO:0000313|EMBL:CCY75356.1}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN
L3_072_000M1_scaffold_5176_17
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

16440..16565
DNA (126bp) protein (42aa)
Phosphotransferase system lactose/cellobiose-specific IIB subunit n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LQR4_9SPIR
Phosphotransferase system lactose/cellobiose-specific IIB subunit {ECO:0000313|EMBL:CCY75357.1}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
PTS system lactose/cellobiose-specific transporter subunit IIB
Displaying 17 items

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