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L3_072_000M1_scaffold_5178

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_5178_1
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(112..789)
DNA (678bp) protein (226aa)
Tetrapyrrole (Corrin/porphyrin) methylase n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LSZ0_9SPIR
Tetrapyrrole (Corrin/porphyrin) methylase {ECO:0000313|EMBL:CCY76221.1}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase
L3_072_000M1_scaffold_5178_2
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(802..1404)
DNA (603bp) protein (201aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA 7-methylguanosine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00074}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LT84_9SPIR
gidB; glucose-inhibited division protein B
L3_072_000M1_scaffold_5178_3
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(1425..2141)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LAR1_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY76223.1}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
hypothetical protein
L3_072_000M1_scaffold_5178_4
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(2166..3959)
DNA (1794bp) protein (598aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LFG0_9SPIR
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:CCY76224.1}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
TPR domain-containing protein
L3_072_000M1_scaffold_5178_5
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

4305..4784
DNA (480bp) protein (160aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPS {ECO:0000256|HAMAP-Rule:MF_00107};; EC=4.6.1.12 {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395};; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LAK6_9SPIR
ispF; 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase
L3_072_000M1_scaffold_5178_6
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

4793..5746
DNA (954bp) protein (318aa)
Squalene/phytoene synthase n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LSZ5_9SPIR
Squalene/phytoene synthase {ECO:0000313|EMBL:CCY76226.1}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
squalene/phytoene synthase
L3_072_000M1_scaffold_5178_7
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(5743..6345)
DNA (603bp) protein (201aa)
Smr domain protein n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LT88_9SPIR
Smr domain protein {ECO:0000313|EMBL:CCY76227.1}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
Smr protein/MutS2
L3_072_000M1_scaffold_5178_8
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(6361..7851)
DNA (1491bp) protein (497aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
Transcription termination factor Rho n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LAR6_9SPIR
rho; transcription termination factor Rho
L3_072_000M1_scaffold_5178_9
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists


comp(7944..8327)
DNA (384bp) protein (128aa)
50S ribosomal protein L17 n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LFG5_9SPIR
50S ribosomal protein L17 {ECO:0000256|RuleBase:RU000661}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
50S ribosomal protein L17
L3_072_000M1_scaffold_5178_10
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(8356..9336)
DNA (981bp) protein (327aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
DNA-directed RNA polymerase subunit alpha n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LAL0_9SPIR
DNA-directed RNA polymerase subunit alpha
L3_072_000M1_scaffold_5178_11
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists


comp(9360..9986)
DNA (627bp) protein (209aa)
30S ribosomal protein S4 n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LT00_9SPIR
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
30S ribosomal protein S4
L3_072_000M1_scaffold_5178_12
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists


comp(10015..10425)
DNA (411bp) protein (137aa)
30S ribosomal protein S11 n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LT92_9SPIR
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
rpsK; 30S ribosomal protein S11
L3_072_000M1_scaffold_5178_13
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists


comp(10447..10836)
DNA (390bp) protein (130aa)
30S ribosomal protein S13 n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LAR9_9SPIR
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
rpsM; 30S ribosomal protein S13
L3_072_000M1_scaffold_5178_14
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(10870..10986)
DNA (117bp) protein (39aa)
50S ribosomal protein L36 n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LFH0_9SPIR
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
50S ribosomal protein L36
L3_072_000M1_scaffold_5178_15
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(11007..11225)
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LAL5_9SPIR
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
infA; translation initiation factor IF-1
L3_072_000M1_scaffold_5178_16
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists


comp(11229..12569)
DNA (1341bp) protein (447aa)
Protein translocase subunit SecY n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LT05_9SPIR
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
secY; preprotein translocase subunit SecY
L3_072_000M1_scaffold_5178_17
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists


comp(12582..12836)
DNA (255bp) protein (85aa)
50S ribosomal protein L15 n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LT97_9SPIR
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
rplO; 50S ribosomal protein L15
Displaying 17 items

View Taxonomy