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L3_072_000M1_scaffold_3560

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_3560_1
Brachyspira intermedia, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

1..237
DNA (237bp) protein (79aa)
tRNA uridine 5-carboxymethylaminomethyl modification protein n=1 Tax=Brachyspira innocens RepID=UPI0003771B8D
gidA; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=1045858 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira.;" source="Brachyspira intermedia (strain ATCC 51140 / PWS/A) (Serpulina; intermedia).;"
L3_072_000M1_scaffold_3560_2
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(472..2016)
DNA (1545bp) protein (515aa)
Uncharacterized protein n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LEK2_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY77533.1}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
hypothetical protein
L3_072_000M1_scaffold_3560_3
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(2035..2790)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LR52_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY75477.1}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
L3_072_000M1_scaffold_3560_4
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(3249..4070)
DNA (822bp) protein (274aa)
Cell division protein ftsA n=1 Tax=Brachyspira sp. CAG:700 RepID=R5L8N2_9SPIR
Cell division protein ftsA {ECO:0000256|PIRNR:PIRNR003101}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
actin like ATPase
L3_072_000M1_scaffold_3560_5
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(4133..4432)
DNA (300bp) protein (100aa)
Cell division protein ftsA n=1 Tax=Brachyspira sp. CAG:700 RepID=R5L8N2_9SPIR
Cell division protein ftsA {ECO:0000256|PIRNR:PIRNR003101}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
cell division protein FtsA
L3_072_000M1_scaffold_3560_6
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(4520..5017)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LDE3_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY75479.1}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
hypothetical protein
L3_072_000M1_scaffold_3560_7
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(5017..5667)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Brachyspira sp. CAG:700 RepID=R5L8G7_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY75480.1}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
hypothetical protein
L3_072_000M1_scaffold_3560_8
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

5793..6473
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LQX7_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY75481.1}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
hypothetical protein
L3_072_000M1_scaffold_3560_9
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

6485..7264
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LR58_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY75482.1}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
hypothetical protein
L3_072_000M1_scaffold_3560_10
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

7270..8253
DNA (984bp) protein (328aa)
RfaF ADP-heptose:LPS heptosyltransferase n=1 Tax=Brachyspira sp. CAG:700 RepID=R5L8N8_9SPIR
RfaF ADP-heptose:LPS heptosyltransferase {ECO:0000313|EMBL:CCY75483.1}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
ADP-heptose:LPS heptosyltransferase RfaF
L3_072_000M1_scaffold_3560_11
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

8263..9717
DNA (1455bp) protein (485aa)
Xaa His dipeptidase n=1 Tax=Brachyspira sp. CAG:700 RepID=R5L8H3_9SPIR
Xaa His dipeptidase {ECO:0000313|EMBL:CCY75485.1}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
Xaa His dipeptidase
L3_072_000M1_scaffold_3560_12
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

9961..11355
DNA (1395bp) protein (465aa)
PolyA polymerase family protein n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LR65_9SPIR
PolyA polymerase family protein {ECO:0000313|EMBL:CCY75487.1}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
polyA polymerase family protein
L3_072_000M1_scaffold_3560_13
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

11360..12133
DNA (774bp) protein (258aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
Type III pantothenate kinase n=1 Tax=Brachyspira sp. CAG:700 RepID=R5L8I1_9SPIR
pantothenate kinase
L3_072_000M1_scaffold_3560_14
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

12270..12536
DNA (267bp) protein (89aa)
Phosphocarrier protein n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LR71_9SPIR
Phosphocarrier protein {ECO:0000313|EMBL:CCY75492.1}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
phosphocarrier protein
L3_072_000M1_scaffold_3560_15
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

12554..14317
DNA (1764bp) protein (588aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Brachyspira sp. CAG:700 RepID=R5L8Q2_9SPIR
ptsI; phosphoenolpyruvate protein phosphotransferase
L3_072_000M1_scaffold_3560_16
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(14428..15891)
DNA (1464bp) protein (488aa)
Carboxyl-terminal protease n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LDF9_9SPIR
Carboxyl-terminal protease {ECO:0000313|EMBL:CCY75494.1}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
carboxyl terminal protease
Displaying 16 items

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