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L3_072_000M1_scaffold_3810

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_3810_1
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

96..317
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LKS9_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY78024.1}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
hypothetical protein
L3_072_000M1_scaffold_3810_2
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(382..1092)
DNA (711bp) protein (237aa)
Zn dependant metalloprotease n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LY97_9SPIR
Zn dependant metalloprotease {ECO:0000313|EMBL:CCY78021.1}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
Zn dependent metalloprotease
L3_072_000M1_scaffold_3810_3
Brachyspira hyodysenteriae, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(1124..1957)
DNA (834bp) protein (278aa)
Bifunctional protein FolD {ECO:0000255|HAMAP-Rule:MF_01576}; Includes:; Methylenetetrahydrofolate dehydrogenase {ECO:0000255|HAMAP-Rule:MF_01576}; EC=1.5.1.5 {ECO:0000255|HAMAP-Rule:MF_01576};; Includes:; Methenyltetrahydrofolate cyclohydrolase {ECO:0000255|HAMAP-Rule:MF_01576}; EC=3.5.4.9 {ECO:0000255|HAMAP-Rule:MF_01576};; TaxID=565034 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira.;" source="Brachyspira hyodysenteriae (strain ATCC 49526 / WA1).;"
Bifunctional protein FolD n=1 Tax=Brachyspira hyodysenteriae (strain ATCC 49526 / WA1) RepID=FOLD_BRAHW
folD; methylenetetrahydrofolate dehydrogenase
L3_072_000M1_scaffold_3810_4
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

2419..2847
DNA (429bp) protein (143aa)
Flagellar basal body rod protein FlgB n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LLJ7_9SPIR
Flagellar basal body rod protein FlgB {ECO:0000256|PIRNR:PIRNR002889}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
flgB; flagellar basal body rod protein FlgB
L3_072_000M1_scaffold_3810_5
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

2883..3344
DNA (462bp) protein (154aa)
Flagellar basal body rod protein FlgC n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LZ07_9SPIR
Flagellar basal-body rod protein FlgC {ECO:0000256|RuleBase:RU362062}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
flgC; flagellar basal body rod protein FlgC
L3_072_000M1_scaffold_3810_6
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

3363..3695
DNA (333bp) protein (111aa)
Flagellar hook-basal body complex subunit FliE n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LZ93_9SPIR
Flagellar hook-basal body complex subunit FliE {ECO:0000313|EMBL:CCY78337.1}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
flagellar hook-basal body complex subunit FliE
L3_072_000M1_scaffold_3810_7
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

3695..4471
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LZ01_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY78336.1}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
hypothetical protein
L3_072_000M1_scaffold_3810_8
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(4593..4991)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LGT2_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY78335.1}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
L3_072_000M1_scaffold_3810_9
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

5485..6078
DNA (594bp) protein (198aa)
Putative lipoprotein n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LDF2_9SPIR
Putative lipoprotein {ECO:0000313|EMBL:CCY77183.1}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
lipoprotein
L3_072_000M1_scaffold_3810_10
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

6121..7245
DNA (1125bp) protein (375aa)
Peptidoglycan-binding lysin domain protein n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LVY9_9SPIR
Peptidoglycan-binding lysin domain protein {ECO:0000313|EMBL:CCY77182.1}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
peptidoglycan-binding lysin domain protein
L3_072_000M1_scaffold_3810_11
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

7342..7917
DNA (576bp) protein (192aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LVR9_9SPIR
cyclophilin type peptidyl-prolyl cis-trans isomerase
L3_072_000M1_scaffold_3810_12
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

7937..8422
DNA (486bp) protein (162aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LDB0_9SPIR
cyclophilin type peptidyl-prolyl cis-trans isomerase
L3_072_000M1_scaffold_3810_13
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

8526..9461
DNA (936bp) protein (312aa)
RNA polymerase sigma factor n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LI77_9SPIR
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
RpoD subfamily RNA polymerase sigma-70 subunit
L3_072_000M1_scaffold_3810_14
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

9555..10400
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LVY3_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY77177.1}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
hypothetical protein
L3_072_000M1_scaffold_3810_15
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(10457..10927)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LDA7_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY77175.1}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
L3_072_000M1_scaffold_3810_16
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(10964..11362)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LDE6_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY77173.1}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
hypothetical protein
L3_072_000M1_scaffold_3810_17
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(11359..11913)
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LDA3_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY77170.1}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
L3_072_000M1_scaffold_3810_18
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(12474..13496)
DNA (1023bp) protein (341aa)
Glycerol dehydrogenase n=1 Tax=Brachyspira sp. CAG:700 RepID=R5L4Q2_9SPIR
Glycerol dehydrogenase {ECO:0000313|EMBL:CCY74150.1}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
gldA; glycerol dehydrogenase
L3_072_000M1_scaffold_3810_19
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

13786..14307
DNA (522bp) protein (174aa)
CheW protein n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LM17_9SPIR
CheW protein {ECO:0000313|EMBL:CCY74151.1}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
chemotaxis protein CheW
L3_072_000M1_scaffold_3810_20
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(14304..14909)
DNA (606bp) protein (202aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LMC6_9SPIR
5-formyltetrahydrofolate cyclo-ligase
L3_072_000M1_scaffold_3810_21
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(14893..15639)
DNA (747bp) protein (249aa)
Type IV pilus assembly PilZ n=1 Tax=Brachyspira sp. CAG:700 RepID=R5L4X5_9SPIR
Type IV pilus assembly PilZ {ECO:0000313|EMBL:CCY74153.1}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
type IV pilus assembly PilZ
L3_072_000M1_scaffold_3810_22
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

15769..17871
DNA (2103bp) protein (701aa)
RecG-like DNA helicase n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LM22_9SPIR
RecG-like DNA helicase {ECO:0000313|EMBL:CCY74156.1}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
recG; RecG-like DNA helicase
L3_072_000M1_scaffold_3810_23
Brachyspira pilosicoli, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

17884..18396
DNA (513bp) protein (171aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1133568 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira.;" source="Brachyspira pilosicoli B2904.;"
Signal peptidase I n=2 Tax=Brachyspira pilosicoli RepID=J9UFM1_BRAPL
lepB; signal peptidase I
L3_072_000M1_scaffold_3810_24
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(18431..18538)
DNA (108bp) protein (36aa)
phosphoglucosamine mutase (EC:5.4.2.10)
Phosphomannomutase/phosphoglucomutase n=1 Tax=Brachyspira sp. CAG:700 RepID=R5L4Z5_9SPIR
Phosphomannomutase/phosphoglucomutase {ECO:0000313|EMBL:CCY74178.1}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
Displaying 24 items

View Taxonomy