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L3_072_000M1_scaffold_2492

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_2492_1
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

1..123
DNA (123bp) protein (41aa)
MgtC/SapB transporter n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LNA9_9SPIR
MgtC/SapB transporter {ECO:0000313|EMBL:CCY74546.1}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
mgtC; MgtC family protein
L3_072_000M1_scaffold_2492_2
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

203..856
DNA (654bp) protein (218aa)
Formamidopyrimidine-D glycolase n=1 Tax=Brachyspira sp. CAG:700 RepID=R5L5X1_9SPIR
Formamidopyrimidine-D glycolase {ECO:0000313|EMBL:CCY74545.1}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
DNA glycosylase/AP lyase
L3_072_000M1_scaffold_2492_3
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(897..1379)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LAU9_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY74544.1}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
L3_072_000M1_scaffold_2492_4
unknown

Not on your lists

comp(1369..1590)
DNA (222bp) protein (74aa)

This feature has no annotations

L3_072_000M1_scaffold_2492_5
Brachyspira pilosicoli, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(1895..2449)
DNA (555bp) protein (185aa)
Nudix hydrolase n=3 Tax=Brachyspira pilosicoli RepID=D8IBX7_BRAP9
nudix hydrolase
Nudix hydrolase {ECO:0000313|EMBL:ADK30650.1}; TaxID=759914 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira.;" source="Brachyspira pilosicoli (strain ATCC BAA-1826 / 95/1000).;"
L3_072_000M1_scaffold_2492_6
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(2454..3488)
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LXL0_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY77816.1}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
hypothetical protein
L3_072_000M1_scaffold_2492_7
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

3711..4337
DNA (627bp) protein (209aa)
Beta-lactamase domain protein n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LF98_9SPIR
Beta-lactamase domain protein {ECO:0000313|EMBL:CCY77840.1}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
beta-lactamase
L3_072_000M1_scaffold_2492_8
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(4424..5230)
DNA (807bp) protein (269aa)
Flagellar protein FlaB2 n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LFD4_9SPIR
Flagellar protein FlaB2 {ECO:0000313|EMBL:CCY77843.1}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
flaB2; flagellar protein FlaB0
L3_072_000M1_scaffold_2492_9
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

5441..6025
DNA (585bp) protein (195aa)
Regulatory protein TetR family n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LFA5_9SPIR
Regulatory protein TetR family {ECO:0000313|EMBL:CCY77845.1}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
regulatory protein, TetR family
L3_072_000M1_scaffold_2492_10
Brachyspira intermedia, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(6022..6288)
DNA (267bp) protein (89aa)
Phosphotransferase system, putative phosphocarrier HPr protein n=2 Tax=Brachyspira RepID=G0EKR3_BRAIP
phosphotransferase system, putative phosphocarrier HPr protein
Phosphotransferase system, putative phosphocarrier HPr protein {ECO:0000313|EMBL:AEM21371.1}; TaxID=1045858 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira.;" source="Brachyspira intermedia (strain ATCC 51140 / PWS/A) (Serpulina; intermedia).;"
L3_072_000M1_scaffold_2492_11
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(6315..8186)
DNA (1872bp) protein (624aa)
Transcriptional antiterminator BglB n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LXP3_9SPIR
Transcriptional antiterminator BglB {ECO:0000313|EMBL:CCY77851.1}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
PTS modulated transcriptional regulator MtlR family
L3_072_000M1_scaffold_2492_12
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

8320..8625
DNA (306bp) protein (102aa)
Phosphotransferase system lactose/cellobiose-specific IIB subunit n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LFB8_9SPIR
Phosphotransferase system lactose/cellobiose-specific IIB subunit {ECO:0000313|EMBL:CCY77855.1}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
PTS system cellobiose-specific transporter subunit IIB
L3_072_000M1_scaffold_2492_13
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

8664..9989
DNA (1326bp) protein (442aa)
PTS system cellobiose-specific IIC component (CelB) n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LXP6_9SPIR
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
PTS system cellobiose-specific transporter subunit IIC CelB
L3_072_000M1_scaffold_2492_14
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

9976..11088
DNA (1113bp) protein (371aa)
Outer surface protein n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LFE6_9SPIR
Outer surface protein {ECO:0000313|EMBL:CCY77858.1}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
outer surface protein
L3_072_000M1_scaffold_2492_15
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

11156..11491
DNA (336bp) protein (112aa)
Phosphotransferase system PTS lactose/cellobiose-specific IIA subunit n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LXW3_9SPIR
Phosphotransferase system PTS lactose/cellobiose-specific IIA subunit {ECO:0000313|EMBL:CCY77862.1}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
PTS system lactose/cellobiose-specific transporter subunit IIA
L3_072_000M1_scaffold_2492_16
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

11580..11939
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LK57_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY77864.1}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
PRD domain-containing protein
L3_072_000M1_scaffold_2492_17
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

11994..12353
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LXQ8_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY77866.1}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
hypothetical protein
L3_072_000M1_scaffold_2492_18
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

12375..13661
DNA (1287bp) protein (429aa)
Uncharacterized protein n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LFF6_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY77868.1}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
hypothetical protein
L3_072_000M1_scaffold_2492_19
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

13673..14707
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LFD6_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY77870.1}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
hypothetical protein
L3_072_000M1_scaffold_2492_20
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

14719..15591
DNA (873bp) protein (291aa)
Phosphotriesterase n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LXX7_9SPIR
Phosphotriesterase {ECO:0000313|EMBL:CCY77872.1}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
aryldialkylphosphatase
L3_072_000M1_scaffold_2492_21
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

15605..16708
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LFE2_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY77875.1}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
hypothetical protein
L3_072_000M1_scaffold_2492_22
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

16710..17897
DNA (1188bp) protein (396aa)
Amino acid racemase n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LXS0_9SPIR
Amino acid racemase {ECO:0000313|EMBL:CCY77876.1}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
alanine racemase
L3_072_000M1_scaffold_2492_23
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

17890..19092
DNA (1203bp) protein (401aa)
phosphopentomutase (EC:5.4.2.7)
Metalloenzyme domain-containing protein n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LXY1_9SPIR
Metalloenzyme domain-containing protein {ECO:0000313|EMBL:CCY77877.1}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
L3_072_000M1_scaffold_2492_24
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

19187..19504
DNA (318bp) protein (106aa)
Thioredoxin n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LFG4_9SPIR
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
thioredoxin
L3_072_000M1_scaffold_2492_25
Brachyspira sp. CAG:700, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

19582..20613
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Brachyspira sp. CAG:700 RepID=R5LK75_9SPIR
Uncharacterized protein {ECO:0000313|EMBL:CCY77879.1}; TaxID=1262760 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira; environmental samples.;" source="Brachyspira sp. CAG:700.;"
hypothetical protein
Displaying 25 items

View Taxonomy