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L3_072_000M1_scaffold_24

Search features with annotation key words

Displaying items 1-30 of 260 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_24_1
Butyrivibrio crossotus CAG:259, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..1937
DNA (1935bp) protein (645aa)
Uncharacterized protein n=1 Tax=Butyrivibrio crossotus CAG:259 RepID=R5LXG6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY77707.1}; TaxID=1263062 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio crossotus CAG:259.;"
hypothetical protein
L3_072_000M1_scaffold_24_2
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1953..3224
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5SAJ2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ42092.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
putative ATPase
L3_072_000M1_scaffold_24_3
Clostridium sp. CAG:122, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3228..3722
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:122 RepID=R5S557_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ42091.1}; TaxID=1262773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:122.;"
hypothetical protein
L3_072_000M1_scaffold_24_4
Lachnospiraceae bacterium 8_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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3754..7353
DNA (3600bp) protein (1200aa)
Type II site-specific deoxyribonuclease n=2 Tax=unclassified Lachnospiraceae RepID=E5XGB7_9FIRM
Type II site-specific deoxyribonuclease {ECO:0000313|EMBL:EFV19661.1}; TaxID=665951 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 8_1_57FAA.;"
N-6 DNA Methylase/Eco57I restriction endonuclease
L3_072_000M1_scaffold_24_5
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7397..8737
DNA (1341bp) protein (447aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A1L3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX36653.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
L3_072_000M1_scaffold_24_6
Butyrivibrio sp. CAG:318, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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8745..8993
DNA (249bp) protein (83aa)
Hypothetical conserved protein n=1 Tax=Butyrivibrio sp. CAG:318 RepID=R6QX92_9FIRM
Hypothetical conserved protein {ECO:0000313|EMBL:CDC37554.1}; TaxID=1262761 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio sp. CAG:318.;"
hypothetical protein
L3_072_000M1_scaffold_24_7
Butyrivibrio crossotus CAG:259, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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9238..11784
DNA (2547bp) protein (849aa)
Putative DNA repair protein n=1 Tax=Butyrivibrio crossotus CAG:259 RepID=R5LG85_9FIRM
Putative DNA repair protein {ECO:0000313|EMBL:CCY78198.1}; TaxID=1263062 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio crossotus CAG:259.;"
TIGR02687 family protein
L3_072_000M1_scaffold_24_8
unknown

Not on your lists

11803..12357
DNA (555bp) protein (185aa)

This feature has no annotations

L3_072_000M1_scaffold_24_9
Dorea sp. CAG:105, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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12405..13724
DNA (1320bp) protein (440aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:105 RepID=R5DDE7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX73916.1}; TaxID=1262872 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:105.;"
hypothetical protein
L3_072_000M1_scaffold_24_10
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13787..15868
DNA (2082bp) protein (694aa)
ATP-dependent protease La n=1 Tax=Clostridium sp. CAG:62 RepID=R7CD07_9CLOT
ATP-dependent protease La {ECO:0000313|EMBL:CDD75198.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L3_072_000M1_scaffold_24_11
Butyrivibrio crossotus CAG:259, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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15928..16152
DNA (225bp) protein (75aa)
Quinolinate sythetase A n=1 Tax=Butyrivibrio crossotus CAG:259 RepID=R5LFM0_9FIRM
Quinolinate sythetase A {ECO:0000313|EMBL:CCY77935.1}; TaxID=1263062 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio crossotus CAG:259.;"
hypothetical protein
L3_072_000M1_scaffold_24_12
Butyrivibrio crossotus CAG:259, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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16155..16628
DNA (474bp) protein (158aa)
UPF0178 protein BN569_01030 n=1 Tax=Butyrivibrio crossotus CAG:259 RepID=R5LFL8_9FIRM
UPF0178 protein BN569_01030 {ECO:0000256|HAMAP-Rule:MF_00489}; TaxID=1263062 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio crossotus CAG:259.;"
hypothetical protein
L3_072_000M1_scaffold_24_13
Butyrivibrio crossotus CAG:259, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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16615..16833
DNA (219bp) protein (73aa)
Uncharacterized protein n=2 Tax=Butyrivibrio RepID=D4S0M3_9FIRM
Putative L-aspartate dehydrogenase {ECO:0000313|EMBL:CCY77939.1}; TaxID=1263062 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio crossotus CAG:259.;"
hypothetical protein
L3_072_000M1_scaffold_24_14
Butyrivibrio crossotus CAG:259, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16900..17007
DNA (108bp) protein (36aa)
Uncharacterized protein n=1 Tax=Butyrivibrio crossotus CAG:259 RepID=R5LY53_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY77942.1}; TaxID=1263062 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio crossotus CAG:259.;"
L3_072_000M1_scaffold_24_15
Butyrivibrio crossotus CAG:259, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17125..17811
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Butyrivibrio crossotus CAG:259 RepID=R5LFM3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY77943.1}; TaxID=1263062 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio crossotus CAG:259.;"
hypothetical protein
L3_072_000M1_scaffold_24_16
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17845..18054
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=D4S0M1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFF68369.1}; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
hypothetical protein predicted by Glimmer/Critica
L3_072_000M1_scaffold_24_17
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18051..18380
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=D4S0L4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFF68362.1}; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
hypothetical protein
L3_072_000M1_scaffold_24_18
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18557..19642
DNA (1086bp) protein (362aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|HAMAP-Rule:MF_01033}; Beta-IPM dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033}; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
3-isopropylmalate dehydrogenase n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=D4S0L1_9FIRM
3-isopropylmalate dehydrogenase
L3_072_000M1_scaffold_24_19
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19652..21316
DNA (1665bp) protein (555aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=D4S0L0_9FIRM
L3_072_000M1_scaffold_24_20
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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21338..22996
DNA (1659bp) protein (553aa)
Acetolactate synthase, large subunit, biosynthetic type {ECO:0000313|EMBL:EFF68357.1}; EC=2.2.1.6 {ECO:0000313|EMBL:EFF68357.1};; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
Acetolactate synthase, large subunit, biosynthetic type n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=D4S0K9_9FIRM
acetolactate synthase
L3_072_000M1_scaffold_24_21
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23026..24225
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=D4S0K8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFF68356.1}; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
protease
L3_072_000M1_scaffold_24_22
Butyrivibrio crossotus CAG:259, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24253..24855)
DNA (603bp) protein (201aa)
Radical SAM domain protein n=1 Tax=Butyrivibrio crossotus CAG:259 RepID=R5LKH0_9FIRM
Radical SAM domain protein {ECO:0000313|EMBL:CCY77954.1}; TaxID=1263062 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio crossotus CAG:259.;"
Radical SAM superfamily.
L3_072_000M1_scaffold_24_23
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24877..25722)
DNA (846bp) protein (282aa)
Pyridoxal kinase {ECO:0000256|SAAS:SAAS00088591}; EC=2.7.1.35 {ECO:0000256|SAAS:SAAS00088591};; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
Pyridoxal/pyridoxine/pyridoxamine kinase (EC:2.7.1.35)
Putative pyridoxal kinase n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=D4S0K6_9FIRM
L3_072_000M1_scaffold_24_24
Butyrivibrio crossotus CAG:259, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25700..26206)
DNA (507bp) protein (169aa)
Uncharacterized protein n=2 Tax=Butyrivibrio RepID=D4S0K5_9FIRM
Conserved hypothetical membrane protein DUF1393 family {ECO:0000313|EMBL:CCY77958.1}; TaxID=1263062 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio crossotus CAG:259.;"
hypothetical protein
L3_072_000M1_scaffold_24_25
Butyrivibrio crossotus CAG:259, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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26442..27524
DNA (1083bp) protein (361aa)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=1263062 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio crossotus CAG:259.;"
phosphoserine aminotransferase (EC:2.6.1.52)
Phosphoserine aminotransferase n=1 Tax=Butyrivibrio crossotus CAG:259 RepID=R5LFQ0_9FIRM
L3_072_000M1_scaffold_24_26
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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27579..28742
DNA (1164bp) protein (388aa)
4-phosphoerythronate dehydrogenase {ECO:0000313|EMBL:EFF68351.1}; EC=1.1.1.290 {ECO:0000313|EMBL:EFF68351.1};; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
4-phosphoerythronate dehydrogenase n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=D4S0K3_9FIRM
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding subunit
L3_072_000M1_scaffold_24_27
Butyrivibrio crossotus CAG:259, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28754..29998
DNA (1245bp) protein (415aa)
Uncharacterized protein n=2 Tax=Butyrivibrio RepID=D4S0K2_9FIRM
HTH domain of SpoOJ/ParA/ParB/RepB family protein {ECO:0000313|EMBL:CCY77964.1}; TaxID=1263062 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio crossotus CAG:259.;"
hypothetical protein
L3_072_000M1_scaffold_24_28
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30094..32112
DNA (2019bp) protein (673aa)
1,4-alpha-glucan branching enzyme {ECO:0000256|SAAS:SAAS00081436}; EC=2.4.1.18 {ECO:0000256|SAAS:SAAS00081436};; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
glycogen branching enzyme (EC:2.4.1.18)
Putative 1,4-alpha-glucan branching enzyme n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=D4S0K1_9FIRM
L3_072_000M1_scaffold_24_29
Butyrivibrio crossotus CAG:259, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32112..32981
DNA (870bp) protein (290aa)
Small-conductance mechanosensitive channel n=1 Tax=Butyrivibrio crossotus CAG:259 RepID=R5LY12_9FIRM
Small-conductance mechanosensitive channel {ECO:0000313|EMBL:CCY77966.1}; TaxID=1263062 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio crossotus CAG:259.;"
MscS family small conductance mechanosensitive ion channel
L3_072_000M1_scaffold_24_30
Butyrivibrio crossotus CAG:259, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32984..33745
DNA (762bp) protein (254aa)
Hypothetical cytosolic protein n=1 Tax=Butyrivibrio crossotus CAG:259 RepID=R5LFP5_9FIRM
Hypothetical cytosolic protein {ECO:0000313|EMBL:CCY77968.1}; TaxID=1263062 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio crossotus CAG:259.;"
hypothetical protein
Displaying items 1-30 of 260 in total

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