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L3_072_000M1_scaffold_70

Search features with annotation key words

Displaying items 1-30 of 251 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_70_1
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(353..1042)
DNA (690bp) protein (230aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=D4RZ97_9FIRM
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
L3_072_000M1_scaffold_70_2
Butyrivibrio crossotus CAG:259, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1042..2064)
DNA (1023bp) protein (341aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00018957}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=1263062 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio crossotus CAG:259.;"
O-sialoglycoprotein endopeptidase (EC:3.4.24.57)
tRNA N6-adenosine threonylcarbamoyltransferase n=1 Tax=Butyrivibrio crossotus CAG:259 RepID=R5LRF2_9FIRM
L3_072_000M1_scaffold_70_3
Butyrivibrio crossotus CAG:259, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2071..2658)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Butyrivibrio crossotus CAG:259 RepID=R5LR68_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY75566.1}; TaxID=1263062 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio crossotus CAG:259.;"
hypothetical protein
L3_072_000M1_scaffold_70_4
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2676..3584)
DNA (909bp) protein (303aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_01818}; tRNase Z {ECO:0000256|HAMAP-Rule:MF_01818}; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
Ribonuclease Z n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=D4RZA0_9FIRM
ribonuclease Z
L3_072_000M1_scaffold_70_5
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3587..4051)
DNA (465bp) protein (155aa)
Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:EFF68645.1}; EC=2.3.1.128 {ECO:0000313|EMBL:EFF68645.1};; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
Ribosomal-protein-alanine acetyltransferase n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=D4RZA1_9FIRM
hypothetical protein
L3_072_000M1_scaffold_70_6
Butyrivibrio crossotus CAG:259, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4044..4745)
DNA (702bp) protein (234aa)
Universal bacterial protein YeaZ n=1 Tax=Butyrivibrio crossotus CAG:259 RepID=R5L8Z2_9FIRM
Universal bacterial protein YeaZ {ECO:0000313|EMBL:CCY75563.1}; TaxID=1263062 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio crossotus CAG:259.;"
Inactive homolog of metal-dependent proteases, putative molecular chaperone
L3_072_000M1_scaffold_70_7
Butyrivibrio crossotus CAG:259, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4747..5175)
DNA (429bp) protein (143aa)
Nucleotide-binding protein YjeE n=1 Tax=Butyrivibrio crossotus CAG:259 RepID=R5LRE8_9FIRM
Nucleotide-binding protein YjeE {ECO:0000313|EMBL:CCY75562.1}; TaxID=1263062 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio crossotus CAG:259.;"
hypothetical protein
L3_072_000M1_scaffold_70_8
Butyrivibrio crossotus CAG:259, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5186..5683)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Butyrivibrio crossotus CAG:259 RepID=R5LR64_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY75561.1}; TaxID=1263062 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio crossotus CAG:259.;"
hypothetical protein
L3_072_000M1_scaffold_70_9
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5782..7092)
DNA (1311bp) protein (437aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
lysC; aspartate kinase (EC:2.7.2.4)
Aspartokinase n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=D4RZA5_9FIRM
L3_072_000M1_scaffold_70_10
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7135..8361)
DNA (1227bp) protein (409aa)
Proposed homoserine kinase n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=D4RZA6_9FIRM
Proposed homoserine kinase {ECO:0000313|EMBL:EFF68650.1}; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
proposed homoserine kinase
L3_072_000M1_scaffold_70_11
Butyrivibrio crossotus CAG:259, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8351..9559)
DNA (1209bp) protein (403aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=1263062 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio crossotus CAG:259.;"
homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase n=1 Tax=Butyrivibrio crossotus CAG:259 RepID=R5L8Y7_9FIRM
L3_072_000M1_scaffold_70_12
Butyrivibrio crossotus CAG:259, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9579..10034)
DNA (456bp) protein (152aa)
Chemotaxis protein CheW n=1 Tax=Butyrivibrio crossotus CAG:259 RepID=R5LRE5_9FIRM
Chemotaxis protein CheW {ECO:0000313|EMBL:CCY75557.1}; TaxID=1263062 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio crossotus CAG:259.;"
purine-binding chemotaxis protein CheW
L3_072_000M1_scaffold_70_13
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10051..11169)
DNA (1119bp) protein (373aa)
Peptide chain release factor 2 n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=D4RZA9_9FIRM
Peptide chain release factor 2 {ECO:0000256|HAMAP-Rule:MF_00094, ECO:0000256|SAAS:SAAS00020438}; Short=RF-2 {ECO:0000256|HAMAP-Rule:MF_00094};; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
hypothetical protein
L3_072_000M1_scaffold_70_14
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11329..11532)
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=D4RZB0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFF68654.1}; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
L3_072_000M1_scaffold_70_15
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11652..14240)
DNA (2589bp) protein (863aa)
Protein translocase subunit SecA n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=D4RZB1_9FIRM
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
protein translocase subunit secA
L3_072_000M1_scaffold_70_16
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14396..14926)
DNA (531bp) protein (177aa)
Ribosomal subunit interface protein n=2 Tax=Butyrivibrio RepID=D4RZB2_9FIRM
Ribosomal subunit interface protein {ECO:0000313|EMBL:EFF68656.1}; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
sigma-54 modulation protein
L3_072_000M1_scaffold_70_17
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15284..16141
DNA (858bp) protein (286aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=D4RZB4_9FIRM
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EFF68658.1}; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
3-oxoacyl-[acyl-carrier-protein] reductase
L3_072_000M1_scaffold_70_18
Butyrivibrio crossotus CAG:259, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16142..17074)
DNA (933bp) protein (311aa)
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=1263062 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio crossotus CAG:259.;"
cysteine synthase A (EC:2.5.1.47)
Cysteine synthase A n=2 Tax=Butyrivibrio RepID=D4RZB5_9FIRM
L3_072_000M1_scaffold_70_19
Butyrivibrio crossotus CAG:259, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17098..18405)
DNA (1308bp) protein (436aa)
O-acetylhomoserine sulfhydrolase (EC:2.5.1.49)
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase n=2 Tax=Butyrivibrio RepID=D4RZB6_9FIRM
O-acetylhomoserine sulfhydrylase {ECO:0000313|EMBL:CCY75548.1}; TaxID=1263062 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio crossotus CAG:259.;"
L3_072_000M1_scaffold_70_20
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18576..19649)
DNA (1074bp) protein (358aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
tRNA-specific 2-thiouridylase MnmA n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=D4RZB7_9FIRM
mnmA; tRNA-specific 2-thiouridylase MnmA
L3_072_000M1_scaffold_70_21
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19649..20092)
DNA (444bp) protein (148aa)
Fe-S iron-sulfur cluster assembly protein, NifU family n=2 Tax=Butyrivibrio RepID=D4RZB8_9FIRM
Fe-S iron-sulfur cluster assembly protein, NifU family {ECO:0000313|EMBL:EFF68662.1}; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
FeS cluster assembly scaffold protein NifU, Clostridium type
L3_072_000M1_scaffold_70_22
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(20085..21272)
DNA (1188bp) protein (396aa)
Cysteine desulfurase IscS {ECO:0000256|HAMAP-Rule:MF_00331}; EC=2.8.1.7 {ECO:0000256|HAMAP-Rule:MF_00331};; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
cysteine desulfurase NifS (EC:2.8.1.7)
Cysteine desulfurase NifS n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=D4RZB9_9FIRM
L3_072_000M1_scaffold_70_23
Butyrivibrio crossotus CAG:259, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21403..21837)
DNA (435bp) protein (145aa)
Iron-sulfur cluster assembly transcription factor IscR n=1 Tax=Butyrivibrio crossotus CAG:259 RepID=R5LRD5_9FIRM
Iron-sulfur cluster assembly transcription factor IscR {ECO:0000313|EMBL:CCY75542.1}; TaxID=1263062 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio crossotus CAG:259.;"
transcriptional regulator, BadM/Rrf2 family
L3_072_000M1_scaffold_70_24
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21910..22773)
DNA (864bp) protein (288aa)
EDD domain protein, DegV family n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=D4RZC1_9FIRM
EDD domain protein, DegV family {ECO:0000313|EMBL:EFF68665.1}; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
EDD domain protein, DegV family
L3_072_000M1_scaffold_70_25
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22822..24114)
DNA (1293bp) protein (431aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
M18 family aminopeptidase n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=D4RZC2_9FIRM
aminopeptidase 2
L3_072_000M1_scaffold_70_26
Butyrivibrio crossotus CAG:259, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24228..25097
DNA (870bp) protein (290aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=1263062 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio crossotus CAG:259.;"
methionine aminopeptidase, type I (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=Butyrivibrio crossotus CAG:259 RepID=R5L8X2_9FIRM
L3_072_000M1_scaffold_70_27
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25140..25991)
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=D4RZC4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFF68668.1}; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
Putative transposase, YhgA-like.
L3_072_000M1_scaffold_70_28
Butyrivibrio crossotus CAG:259, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26192..26284)
DNA (93bp) protein (31aa)
Uncharacterized protein n=1 Tax=Butyrivibrio crossotus CAG:259 RepID=R5L8Q3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY75535.1}; TaxID=1263062 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio crossotus CAG:259.;"
L3_072_000M1_scaffold_70_29
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26286..26753)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=D4RZC7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFF68671.1}; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
L3_072_000M1_scaffold_70_30
unknown

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comp(26755..27219)
DNA (465bp) protein (155aa)

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Displaying items 1-30 of 251 in total

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