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L3_072_000M1_scaffold_170

Search features with annotation key words

Displaying items 1-30 of 128 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_170_1
Clostridium sp. CAG:510, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..195)
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:510 RepID=R6CAS5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA68611.1}; TaxID=1262816 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:510.;"
TfoX N-terminal domain-containing protein
L3_072_000M1_scaffold_170_2
Clostridium sp. CAG:510, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(222..860)
DNA (639bp) protein (213aa)
Uncharacterized protein n=2 Tax=root RepID=R6BZH7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA68610.1}; TaxID=1262816 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:510.;"
hypothetical protein
L3_072_000M1_scaffold_170_3
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(883..1626)
DNA (744bp) protein (248aa)
Purine or other phosphorylase family 1 n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SX28_CLOC7
purine or other phosphorylase family 1
Purine or other phosphorylase family 1 {ECO:0000313|EMBL:ADL51389.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 /; 743B).;"
L3_072_000M1_scaffold_170_4

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comp(1638..1853)
DNA (216bp) protein (72aa)
Purine or other phosphorylase family 1 (Fragment) n=1 Tax=human gut metagenome RepID=K1SD86_9ZZZZ
Purine or other phosphorylase family 1 {ECO:0000313|EMBL:EKC53404.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_072_000M1_scaffold_170_5
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1864..2349)
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Roseburia inulinivorans DSM 16841 PF1_9FIRM">RepID=C0FPF1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG95524.1}; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
RdgB/HAM1 family non-canonical purine NTP pyrophosphatase
L3_072_000M1_scaffold_170_6
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2367..4004)
DNA (1638bp) protein (546aa)
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:EFF69778.1}; EC=2.1.1.- {ECO:0000313|EMBL:EFF69778.1};; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
23S rRNA m(5)U-1939 methyltransferase (EC:2.1.1.-)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=D4RWG1_9FIRM
L3_072_000M1_scaffold_170_7
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4005..4403)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=D4RWG2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFF69779.1}; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
L3_072_000M1_scaffold_170_8
Butyrivibrio crossotus CAG:259, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4506..4679)
DNA (174bp) protein (58aa)
Uncharacterized protein n=2 Tax=Butyrivibrio RepID=D4RWG3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY78594.1}; TaxID=1263062 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio crossotus CAG:259.;"
hypothetical protein
L3_072_000M1_scaffold_170_9
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4764..7010)
DNA (2247bp) protein (749aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
ATP-dependent DNA helicase PcrA (EC:3.6.1.-)
Putative ATP-dependent DNA helicase PcrA n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=D4RWG4_9FIRM
L3_072_000M1_scaffold_170_10
Butyrivibrio crossotus CAG:259, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7237..7914)
DNA (678bp) protein (226aa)
PspA/IM30 family protein n=2 Tax=Butyrivibrio RepID=D4RWG5_9FIRM
Phage shock protein A-like protein {ECO:0000313|EMBL:CCY78592.1}; TaxID=1263062 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio crossotus CAG:259.;"
phage shock protein A
L3_072_000M1_scaffold_170_11
Butyrivibrio crossotus CAG:259, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8017..8319)
DNA (303bp) protein (101aa)
TrpR protein n=1 Tax=Butyrivibrio crossotus CAG:259 RepID=R5LZU9_9FIRM
TrpR protein {ECO:0000313|EMBL:CCY78591.1}; TaxID=1263062 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio crossotus CAG:259.;"
TrpR-related protein YerC/YecD
L3_072_000M1_scaffold_170_12
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8375..9184)
DNA (810bp) protein (270aa)
Cof-like hydrolase n=2 Tax=Butyrivibrio RepID=D4RWG7_9FIRM
Cof-like hydrolase {ECO:0000313|EMBL:EFF69784.1}; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
cof family hydrolase
L3_072_000M1_scaffold_170_13
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9324..10280
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=D4RWG8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFF69785.1}; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
hypothetical protein
L3_072_000M1_scaffold_170_14
Butyrivibrio crossotus CAG:259, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10328..11410)
DNA (1083bp) protein (361aa)
Tryptophan--tRNA ligase n=1 Tax=Butyrivibrio crossotus CAG:259 RepID=R5LHC3_9FIRM
Tryptophan--tRNA ligase {ECO:0000313|EMBL:CCY78588.1}; TaxID=1263062 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio crossotus CAG:259.;"
tryptophanyl-tRNA synthetase II
L3_072_000M1_scaffold_170_15
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11482..11769)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=D4RWH0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFF69787.1}; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
L3_072_000M1_scaffold_170_16
Butyrivibrio crossotus CAG:259, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11820..12416)
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Butyrivibrio crossotus CAG:259 RepID=R5LZU6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY78586.1}; TaxID=1263062 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio crossotus CAG:259.;"
hypothetical protein
L3_072_000M1_scaffold_170_17
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12499..12996)
DNA (498bp) protein (166aa)
NADPH-dependent 7-cyano-7-deazaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00818, ECO:0000256|SAAS:SAAS00184002}; EC=1.7.1.13 {ECO:0000256|HAMAP-Rule:MF_00818, ECO:0000256|SAAS:SAAS00001352};; 7-cyano-7-carbaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00818}; NADPH-dependent nitrile oxidoreductase {ECO:0000256|HAMAP-Rule:MF_00818}; PreQ(0) reductase {ECO:0000256|HAMAP-Rule:MF_00818}; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
7-cyano-7-deazaguanine reductase (EC:1.7.1.13)
NADPH-dependent 7-cyano-7-deazaguanine reductase n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=D4RWH2_9FIRM
L3_072_000M1_scaffold_170_18
Butyrivibrio crossotus CAG:259, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12999..13682)
DNA (684bp) protein (228aa)
7-cyano-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00195886}; EC=6.3.4.20 {ECO:0000256|HAMAP-Rule:MF_01633, ECO:0000256|SAAS:SAAS00029421};; 7-cyano-7-carbaguanine synthase {ECO:0000256|HAMAP-Rule:MF_01633}; PreQ(0) synthase {ECO:0000256|HAMAP-Rule:MF_01633}; Queuosine biosynthesis protein QueC {ECO:0000256|HAMAP-Rule:MF_01633}; TaxID=1263062 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio crossotus CAG:259.;"
7-cyano-7-deazaguanine synthase n=1 Tax=Butyrivibrio crossotus CAG:259 RepID=R5LHC1_9FIRM
preQ(0) biosynthesis protein QueC
L3_072_000M1_scaffold_170_19
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13696..14298)
DNA (603bp) protein (201aa)
GTP cyclohydrolase 1 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021192}; EC=3.5.4.16 {ECO:0000256|HAMAP-Rule:MF_00223, ECO:0000256|SAAS:SAAS00021179};; GTP cyclohydrolase I {ECO:0000256|HAMAP-Rule:MF_00223}; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
GTP cyclohydrolase I (EC:3.5.4.16)
GTP cyclohydrolase 1 n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=D4RWH4_9FIRM
L3_072_000M1_scaffold_170_20
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14316..15023)
DNA (708bp) protein (236aa)
7-carboxy-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_00917}; Short=CDG synthase {ECO:0000256|HAMAP-Rule:MF_00917};; EC=4.3.99.3 {ECO:0000256|HAMAP-Rule:MF_00917};; Queuosine biosynthesis protein QueE {ECO:0000256|HAMAP-Rule:MF_00917}; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
7-carboxy-7-deazaguanine synthase n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=D4RWH5_9FIRM
radical SAM domain-containing protein
L3_072_000M1_scaffold_170_21
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14986..15405)
DNA (420bp) protein (140aa)
preQ(0) biosynthesis protein QueD (EC:4.2.3.12)
6-carboxy-5,6,7,8-tetrahydropterin synthase n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=D4RWH6_9FIRM
Queuosine biosynthesis protein QueD {ECO:0000313|EMBL:EFF69793.1}; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
L3_072_000M1_scaffold_170_22
Butyrivibrio crossotus CAG:259, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15523..16473)
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Butyrivibrio crossotus CAG:259 RepID=R5LMB5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY78579.1}; TaxID=1263062 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio crossotus CAG:259.;"
L3_072_000M1_scaffold_170_23
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16486..17205)
DNA (720bp) protein (240aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
Parvulin-like peptidyl-prolyl isomerase (EC:5.2.1.8)
PPIC-type PPIASE domain protein n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=D4RWH8_9FIRM
L3_072_000M1_scaffold_170_24
Butyrivibrio crossotus CAG:259, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17227..18207)
DNA (981bp) protein (327aa)
diaminopimelate dehydrogenase (EC:1.4.1.16)
Diaminopimelate dehydrogenase n=1 Tax=Butyrivibrio crossotus CAG:259 RepID=R5M025_9FIRM
Diaminopimelate dehydrogenase {ECO:0000313|EMBL:CCY78577.1}; TaxID=1263062 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio crossotus CAG:259.;"
L3_072_000M1_scaffold_170_25
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18219..18959)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=D4RWI0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFF69797.1}; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
Flagellar hook-associated protein 2 C-terminus.
L3_072_000M1_scaffold_170_26
Butyrivibrio crossotus CAG:259, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19015..20808)
DNA (1794bp) protein (598aa)
Xaa-Pro aminopeptidase (EC:3.4.11.9)
Peptidase M24 family n=1 Tax=Butyrivibrio crossotus CAG:259 RepID=R5LHB5_9FIRM
Peptidase M24 family {ECO:0000313|EMBL:CCY78573.1}; TaxID=1263062 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio crossotus CAG:259.;"
L3_072_000M1_scaffold_170_27
Butyrivibrio crossotus CAG:259, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20866..21606)
DNA (741bp) protein (247aa)
Lactose phosphotransferase system repressor n=1 Tax=Butyrivibrio crossotus CAG:259 RepID=R5LHB1_9FIRM
Lactose phosphotransferase system repressor {ECO:0000313|EMBL:CCY78568.1}; TaxID=1263062 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio crossotus CAG:259.;"
DeoR family transcriptional regulator, fructose operon transcriptional repressor
L3_072_000M1_scaffold_170_28
Butyrivibrio crossotus, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21584..23248)
DNA (1665bp) protein (555aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=511680 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio.;" source="Butyrivibrio crossotus DSM 2876.;"
phosphoenolpyruvate--protein phosphotransferase (EC:2.7.3.9)
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Butyrivibrio crossotus DSM 2876 RepID=D4RWI3_9FIRM
L3_072_000M1_scaffold_170_29
Butyrivibrio crossotus CAG:259, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23264..23521)
DNA (258bp) protein (86aa)
Phosphocarrier, HPr family n=2 Tax=Butyrivibrio RepID=D4RWI4_9FIRM
Phosphocarrier protein HPr {ECO:0000313|EMBL:CCY78564.1}; TaxID=1263062 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio crossotus CAG:259.;"
Phosphotransferase System HPr (HPr) Family
L3_072_000M1_scaffold_170_30
Butyrivibrio crossotus CAG:259, Butyrivibrio, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23538..25454)
DNA (1917bp) protein (639aa)
PTS system fructose-specific IIABC component n=1 Tax=Butyrivibrio crossotus CAG:259 RepID=R5LHA8_9FIRM
PTS system fructose-specific IIABC component {ECO:0000313|EMBL:CCY78563.1}; TaxID=1263062 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Butyrivibrio; environmental samples.;" source="Butyrivibrio crossotus CAG:259.;"
PTS system D-fructose-specific IIA component (F1P-forming), Frc family (TC 4.A.2.1.4)/PTS system D-fructose-specific IIB component (F1P-forming), Frc family (TC 4.A.2.1.4)/PTS system D-fructose-specific IIC component (F1P-forming), Frc family (TC 4.A.2.1.4)
Displaying items 1-30 of 128 in total

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