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L3_072_000M1_scaffold_5127

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_5127_1
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(2..112)
DNA (111bp) protein (37aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CBS4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC89781.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
hypothetical protein
L3_072_000M1_scaffold_5127_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(109..960)
DNA (852bp) protein (284aa)
Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen (EC:3.6.1.-)
Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen {ECO:0000313|EMBL:CBL01720.1}; EC=3.6.1.- {ECO:0000313|EMBL:CBL01720.1};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4KA57_9FIRM
L3_072_000M1_scaffold_5127_3
Faecalitalea cylindroides, Faecalitalea, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(1048..2385)
DNA (1338bp) protein (446aa)
Uncharacterized protein n=1 Tax=[Eubacterium] cylindroides ATCC 27803 RepID=U2R1L8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK47508.1}; TaxID=649755 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Faecalitalea.;" source="Faecalitalea cylindroides ATCC 27803.;"
Predicted ATPase (AAA+ superfamily)
L3_072_000M1_scaffold_5127_4
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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2665..3762
DNA (1098bp) protein (366aa)
DNA-binding helix-turn-helix protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CBP2_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EEC89872.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Helix-turn-helix domain protein
L3_072_000M1_scaffold_5127_5
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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3895..5523
DNA (1629bp) protein (543aa)
ABC transporter, ATP-binding protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CBP1_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEC89871.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
ABC transporter-like protein
L3_072_000M1_scaffold_5127_6
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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comp(6005..6349)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CBQ4_9FIRM
Uncharacterised protein {ECO:0000313|EMBL:CRH71932.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
hypothetical protein
L3_072_000M1_scaffold_5127_7
Solobacterium moorei, Solobacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(6294..6869)
DNA (576bp) protein (192aa)
Site-specific recombinase, phage integrase family n=1 Tax=Solobacterium moorei F0204 RepID=E7MQL0_9FIRM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EFW23719.1}; TaxID=706433 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Solobacterium.;" source="Solobacterium moorei F0204.;"
Site-specific recombinase XerD
L3_072_000M1_scaffold_5127_8
Solobacterium moorei, Solobacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(6903..7400)
DNA (498bp) protein (166aa)
Site-specific recombinase, phage integrase family n=1 Tax=Solobacterium moorei F0204 RepID=E7MQL0_9FIRM
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EFW23719.1}; TaxID=706433 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Solobacterium.;" source="Solobacterium moorei F0204.;"
integrase
L3_072_000M1_scaffold_5127_9
Solobacterium moorei, Solobacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(7381..7599)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Solobacterium moorei F0204 RepID=E7MQL1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW23720.1}; TaxID=706433 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Solobacterium.;" source="Solobacterium moorei F0204.;"
hypothetical protein
L3_072_000M1_scaffold_5127_10
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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comp(7648..8010)
DNA (363bp) protein (121aa)
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
mRNA interferase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C9M8_9FIRM
growth inhibitor
L3_072_000M1_scaffold_5127_11
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(8427..8858)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Solobacterium moorei F0204 RepID=E7MQL4_9FIRM
RNA polymerase sigma factor%2C sigma-70 family {ECO:0000313|EMBL:CRH71925.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
Sigma-70, region 4.
Displaying 11 items

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