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L3_072_000M1_scaffold_4148

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_4148_1
Bifidobacterium pseudocatenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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3..131
DNA (129bp) protein (43aa)
acetyltransferase, GNAT family (EC:2.3.1.-)
Acetyltransferase, GNAT family n=1 Tax=Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 RepID=C0BSY1_9BIFI
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EEG70482.1}; Uncharacterized protein {ECO:0000313|EMBL:BAR03453.1}; TaxID=547043 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium pseudocatenulatum DSM 20438 = JCM 1200 = LMG 10505.;"
L3_072_000M1_scaffold_4148_2
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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712..1056
DNA (345bp) protein (115aa)
Transcriptional regulator, GntR family n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C809_9FIRM
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EEC91100.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Predicted transcriptional regulators
L3_072_000M1_scaffold_4148_3
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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1061..1840
DNA (780bp) protein (260aa)
ABC transporter, ATP-binding protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C808_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEC91099.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
ABC-type multidrug transport system, ATPase component
L3_072_000M1_scaffold_4148_4
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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1837..2451
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C807_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC91098.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
hypothetical protein
L3_072_000M1_scaffold_4148_5
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(2448..3014)
DNA (567bp) protein (189aa)
Transcriptional regulator, TetR family n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C806_9FIRM
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EEC91097.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
TetR family HTH transcriptional regulator
L3_072_000M1_scaffold_4148_6
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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3076..5622
DNA (2547bp) protein (849aa)
ABC transporter, ATP-binding protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C805_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEC91096.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
ABC-type antimicrobial peptide transport system, ATPase component
L3_072_000M1_scaffold_4148_7
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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5661..6140
DNA (480bp) protein (160aa)
Acetyltransferase, GNAT family n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C804_9FIRM
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EEC91095.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Predicted acetyltransferase
L3_072_000M1_scaffold_4148_8
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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6158..6307
DNA (150bp) protein (50aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C803_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC91094.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
L3_072_000M1_scaffold_4148_9
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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6304..7740
DNA (1437bp) protein (479aa)
ImpB/MucB/SamB family protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C802_9FIRM
ImpB/MucB/SamB family protein {ECO:0000313|EMBL:EEC91093.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
DNA-repair protein
L3_072_000M1_scaffold_4148_10
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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7740..8129
DNA (390bp) protein (130aa)
YolD-like protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C801_9FIRM
YolD-like protein {ECO:0000313|EMBL:EEC91092.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
YolD-like protein.
L3_072_000M1_scaffold_4148_11
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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8426..9313
DNA (888bp) protein (296aa)
Transcriptional regulator, AraC family n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C800_9FIRM
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EEC91091.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
AraC family transcriptional regulator
L3_072_000M1_scaffold_4148_12
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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9297..9617
DNA (321bp) protein (107aa)
MazG nucleotide pyrophosphohydrolase domain protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C7Z9_9FIRM
MazG nucleotide pyrophosphohydrolase domain protein {ECO:0000313|EMBL:EEC91090.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Predicted pyrophosphatase
L3_072_000M1_scaffold_4148_13
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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9622..10281
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C7Z8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC91089.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Displaying 13 items

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