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L3_072_000M1_scaffold_4437

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_4437_1
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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159..1694
DNA (1536bp) protein (512aa)
Phospholipase D domain protein {ECO:0000313|EMBL:EEC91233.1}; EC=3.1.-.- {ECO:0000313|EMBL:EEC91233.1};; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes (EC:2.7.8.-)
Phospholipase D domain protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C7N3_9FIRM
L3_072_000M1_scaffold_4437_2
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(1715..3088)
DNA (1374bp) protein (458aa)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Fumarate hydratase class II n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C7N2_9FIRM
class II fumarate hydratase
L3_072_000M1_scaffold_4437_3
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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3188..5296
DNA (2109bp) protein (703aa)
Pullulanase, type I {ECO:0000313|EMBL:EEC91231.1}; EC=3.2.1.41 {ECO:0000313|EMBL:EEC91231.1};; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Pullulanase, type I n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C7N1_9FIRM
pullulanase
L3_072_000M1_scaffold_4437_4
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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5342..6853
DNA (1512bp) protein (504aa)
Inosine 5-monophosphate dehydrogenase {ECO:0000313|EMBL:EEC91230.1}; EC=1.1.1.205 {ECO:0000313|EMBL:EEC91230.1};; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
IMP dehydrogenase/GMP reductase (EC:1.1.1.205)
Inosine 5-monophosphate dehydrogenase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C7N0_9FIRM
L3_072_000M1_scaffold_4437_5
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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6909..8051
DNA (1143bp) protein (381aa)
Anaerobic ribonucleoside-triphosphate reductase activating protein {ECO:0000313|EMBL:EEC91229.1}; EC=1.97.-.- {ECO:0000313|EMBL:EEC91229.1};; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Anaerobic ribonucleoside-triphosphate reductase activating protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C7M9_9FIRM
anaerobic ribonucleoside-triphosphate reductase activating protein
L3_072_000M1_scaffold_4437_6
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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8048..10006
DNA (1959bp) protein (653aa)
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:EEC91228.1}; EC=1.17.4.2 {ECO:0000313|EMBL:EEC91228.1};; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
nrdD; anaerobic ribonucleoside-triphosphate reductase (EC:1.17.4.2)
Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C7M8_9FIRM
L3_072_000M1_scaffold_4437_7
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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9957..10262
DNA (306bp) protein (102aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Pyrroline-5-carboxylate reductase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C7M7_9FIRM
L3_072_000M1_scaffold_4437_8
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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10241..10699
DNA (459bp) protein (153aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C7M7_9FIRM
L3_072_000M1_scaffold_4437_9
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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10702..11991
DNA (1290bp) protein (430aa)
Cytosol aminopeptidase family, catalytic domain protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C7M6_9FIRM
Cytosol aminopeptidase family, catalytic domain protein {ECO:0000313|EMBL:EEC91226.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
cytosol aminopeptidase
L3_072_000M1_scaffold_4437_10
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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12061..13122
DNA (1062bp) protein (354aa)
Branched-chain-amino-acid transaminase {ECO:0000313|EMBL:EEC91225.1}; EC=2.6.1.42 {ECO:0000313|EMBL:EEC91225.1};; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
branched chain amino acid aminotransferase apoenzyme (EC:2.6.1.42)
Branched-chain-amino-acid transaminase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C7M5_9FIRM
L3_072_000M1_scaffold_4437_11
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(13577..14071)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C7M4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC91253.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
hypothetical protein
L3_072_000M1_scaffold_4437_12
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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14178..15023
DNA (846bp) protein (282aa)
EDD domain protein, DegV family n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C7M3_9FIRM
EDD domain protein, DegV family {ECO:0000313|EMBL:EEC91252.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
hypothetical protein
L3_072_000M1_scaffold_4437_13
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(15073..16599)
DNA (1527bp) protein (509aa)
L-lactate permease n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C7M2_9FIRM
L-lactate permease {ECO:0000313|EMBL:EEC91250.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
hypothetical protein
Displaying 13 items

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