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L3_072_000M1_scaffold_3685

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_3685_1
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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623..2299
DNA (1677bp) protein (559aa)
Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen (EC:3.6.1.-)
Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen {ECO:0000313|EMBL:CBK81269.1}; EC=3.6.1.- {ECO:0000313|EMBL:CBK81269.1};; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen n=1 Tax=Coprococcus catus GD/7 RepID=D4JA98_9FIRM
L3_072_000M1_scaffold_3685_2
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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2667..3188
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=Allobaculum stercoricanis RepID=UPI0003637FCF
TIGR02687 family protein {ECO:0000313|EMBL:EHM91321.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
conserved hypothetical protein TIGR02687
L3_072_000M1_scaffold_3685_3
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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3185..4525
DNA (1341bp) protein (447aa)
TIGR02687 family protein n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9R2I3_9FIRM
TIGR02687 family protein {ECO:0000313|EMBL:EHM91321.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
conserved hypothetical protein TIGR02687
L3_072_000M1_scaffold_3685_4
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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4595..5248
DNA (654bp) protein (218aa)
TIGR02687 family protein n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9R2I3_9FIRM
TIGR02687 family protein {ECO:0000313|EMBL:EHM91321.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
conserved hypothetical protein TIGR02687
L3_072_000M1_scaffold_3685_5
unknown

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5226..5393
DNA (168bp) protein (56aa)

This feature has no annotations

L3_072_000M1_scaffold_3685_6
Bifidobacterium merycicum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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5383..7422
DNA (2040bp) protein (680aa)
Uncharacterized protein n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2F5Q8_CLOS4
ATP-dependent protease La {ECO:0000313|EMBL:KFI70330.1}; TaxID=78345 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium merycicum.;"
hypothetical protein
L3_072_000M1_scaffold_3685_7
Clostridium sp. CAG:75, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7439..9238
DNA (1800bp) protein (600aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:75 RepID=R5T504_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCZ52192.1}; TaxID=1262836 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:75.;"
hypothetical protein
L3_072_000M1_scaffold_3685_8
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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9254..9481
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C9L0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC90575.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
L3_072_000M1_scaffold_3685_9
Solobacterium moorei, Solobacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(9820..10413)
DNA (594bp) protein (198aa)
CHAP domain protein n=1 Tax=Solobacterium moorei F0204 RepID=E7MMA0_9FIRM
CHAP domain protein {ECO:0000313|EMBL:EFW24813.1}; TaxID=706433 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Solobacterium.;" source="Solobacterium moorei F0204.;"
antigen-like protein
L3_072_000M1_scaffold_3685_10
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(10419..10685)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C9J2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC90557.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
L3_072_000M1_scaffold_3685_11
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(10748..11140)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CBP0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC89870.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
hypothetical protein
L3_072_000M1_scaffold_3685_12
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(11079..11312)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CBP0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC89870.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
hypothetical protein
L3_072_000M1_scaffold_3685_13
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

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11701..11943
DNA (243bp) protein (81aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VLV2_9FIRM
Uncharacterised protein {ECO:0000313|EMBL:CRH76963.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
hypothetical protein
L3_072_000M1_scaffold_3685_14
unknown

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comp(11977..12114)
DNA (138bp) protein (46aa)

This feature has no annotations

L3_072_000M1_scaffold_3685_15
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12213..12887
DNA (675bp) protein (225aa)
LytTr DNA-binding domain protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CBN8_9FIRM
LytTr DNA-binding domain protein {ECO:0000313|EMBL:EEC89868.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
hypothetical protein
L3_072_000M1_scaffold_3685_16
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12839..13789
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CBN7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC89867.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Displaying 16 items

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