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L3_072_000M1_scaffold_2206

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_2206_1
unknown

Not on your lists

comp(1..105)
DNA (105bp) protein (35aa)

This feature has no annotations

L3_072_000M1_scaffold_2206_2
unknown

Not on your lists

comp(150..596)
DNA (447bp) protein (149aa)

This feature has no annotations

L3_072_000M1_scaffold_2206_3
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(611..1114)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CBV7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC89726.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
hypothetical protein
L3_072_000M1_scaffold_2206_4
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(1116..1379)
DNA (264bp) protein (88aa)
YcfA-like protein {ECO:0000313|EMBL:CRH81397.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachomatis.;"
L3_072_000M1_scaffold_2206_5
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(1615..2955)
DNA (1341bp) protein (447aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CA98_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC90314.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
hypothetical protein
L3_072_000M1_scaffold_2206_6
unknown

Not on your lists

comp(3131..3460)
DNA (330bp) protein (110aa)

This feature has no annotations

L3_072_000M1_scaffold_2206_7
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


comp(3600..6212)
DNA (2613bp) protein (871aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CA96_9FIRM
L3_072_000M1_scaffold_2206_8
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

6519..6767
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CA95_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC90311.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
L3_072_000M1_scaffold_2206_9
Catenibacterium sp. CAG:290, Catenibacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(6788..7186)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Catenibacterium sp. CAG:290 RepID=R7GKI2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE27576.1}; TaxID=1262767 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Catenibacterium; environmental samples.;" source="Catenibacterium sp. CAG:290.;"
hypothetical protein
L3_072_000M1_scaffold_2206_10
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7204..7653)
DNA (450bp) protein (150aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IL10_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI57849.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
hypothetical protein
L3_072_000M1_scaffold_2206_11
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(7687..7980)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CA94_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC90310.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
hypothetical protein
L3_072_000M1_scaffold_2206_12
Faecalitalea cylindroides, Faecalitalea, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(8025..8399)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=[Eubacterium] cylindroides ATCC 27803 RepID=U2QYF5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERK46343.1}; TaxID=649755 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Faecalitalea.;" source="Faecalitalea cylindroides ATCC 27803.;"
Protein of unknown function (DUF2752).
L3_072_000M1_scaffold_2206_13
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(8380..9243)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CA92_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC90308.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
membrane protein
L3_072_000M1_scaffold_2206_14
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(9295..10443)
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CA91_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC90307.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
hypothetical protein
L3_072_000M1_scaffold_2206_15
Acidaminococcus sp. BV3L6, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(10737..11867)
DNA (1131bp) protein (377aa)
AAA domain protein n=1 Tax=Acidaminococcus sp. BV3L6 RepID=U2U0R0_9FIRM
AAA domain protein {ECO:0000313|EMBL:ERL18649.1}; TaxID=1111120 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus sp. BV3L6.;"
hypothetical protein
L3_072_000M1_scaffold_2206_16
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12047..13852)
DNA (1806bp) protein (602aa)
Cell envelope-like function transcriptional attenuator common domain protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CA86_9FIRM
Cell envelope-like function transcriptional attenuator common domain protein {ECO:0000313|EMBL:EEC90302.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
hypothetical protein
L3_072_000M1_scaffold_2206_17
unknown

Not on your lists

comp(13969..14373)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CA85_9FIRM
L3_072_000M1_scaffold_2206_18
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14333..15826)
DNA (1494bp) protein (498aa)
Cell envelope-like function transcriptional attenuator common domain protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CA84_9FIRM
Cell envelope-like function transcriptional attenuator common domain protein {ECO:0000313|EMBL:EEC90300.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
cell envelope-related transcriptional attenuator
L3_072_000M1_scaffold_2206_19
Firmicutes bacterium M10-2, Firmicutes, Bacteria

Not on your lists

comp(15829..17196)
DNA (1368bp) protein (456aa)
Undecaprenyl-phosphate galactose phosphotransferase WbaP n=1 Tax=Firmicutes bacterium M10-2 RepID=R9LQW3_9FIRM
Undecaprenyl-phosphate galactose phosphotransferase WbaP {ECO:0000313|EMBL:EOS61170.1}; TaxID=1235796 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium M10-2.;"
Undecaprenyl-phosphate galactose phosphotransferase, WbaP/exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
Displaying 19 items

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