name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
L3_072_000M1_scaffold_1157_1
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
2..109
|
Peptidase E n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4MKA4_9FIRM
Peptidase E
Peptidase family S51 {ECO:0000313|EMBL:EDS00577.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
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L3_072_000M1_scaffold_1157_2
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria
|
Not on your lists |
comp(631..882)
|
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CAN9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC90220.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
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|
L3_072_000M1_scaffold_1157_3
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria
|
Not on your lists |
comp(939..1784)
|
Phospholipase, patatin family n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CAN8_9FIRM
Phospholipase, patatin family {ECO:0000313|EMBL:EEC90219.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Predicted esterase of the alpha-beta hydrolase superfamily
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L3_072_000M1_scaffold_1157_4
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria
|
Not on your lists |
comp(1835..2746)
|
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CAN7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC90218.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
hypothetical protein
|
|
L3_072_000M1_scaffold_1157_5
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria
|
Not on your lists |
comp(2757..3602)
|
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CAN6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC90217.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
endonuclease
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|
L3_072_000M1_scaffold_1157_6
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria
|
Not on your lists |
comp(3766..4497)
|
CobB/CobQ-like protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CAN5_9FIRM
CobB/CobQ-like protein {ECO:0000313|EMBL:EEC90216.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Predicted glutamine amidotransferase
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|
L3_072_000M1_scaffold_1157_7
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria
|
Not on your lists |
comp(4494..5810)
|
Mur ligase middle domain protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CAN4_9FIRM
Mur ligase middle domain protein {ECO:0000313|EMBL:EEC90215.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
UDP-N-acetylmuramyl tripeptide synthase
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L3_072_000M1_scaffold_1157_8
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria
|
Not on your lists |
5923..7353
|
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CAN3_9FIRM
|
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L3_072_000M1_scaffold_1157_9
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria
|
Not on your lists |
comp(7381..8001)
|
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CAN2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC90213.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Predicted metal-dependent hydrolase
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L3_072_000M1_scaffold_1157_10
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria
|
Not on your lists |
comp(8001..8834)
|
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CAN1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC90212.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
ATPases involved in chromosome partitioning
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L3_072_000M1_scaffold_1157_11
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria
|
Not on your lists |
comp(8838..9740)
|
Tyrosine recombinase XerC n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CAN0_9FIRM
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
integrase/recombinase XerD
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|
L3_072_000M1_scaffold_1157_12
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria
|
Not on your lists |
comp(9761..10414)
|
Methyltransferase small domain protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CAM9_9FIRM
Methyltransferase small domain protein {ECO:0000313|EMBL:EEC90210.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
S-adenosylmethionine:2-demethylmenaquinone methyltransferase
|
|
L3_072_000M1_scaffold_1157_13
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria
|
Not on your lists |
comp(10411..11580)
|
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
DNA polymerase IV n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CAM7_9FIRM
dinB.1; DNA polymerase IV
|
|
L3_072_000M1_scaffold_1157_14
Firmicutes bacterium M10-2, Firmicutes, Bacteria
|
Not on your lists |
comp(11573..13207)
|
DNA repair protein RecN n=2 Tax=Firmicutes bacterium M10-2 RepID=R9LQJ9_9FIRM
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=1235796 species="Bacteria; Firmicutes.;" source="Firmicutes bacterium M10-2.;"
DNA repair protein RecN
|
|
L3_072_000M1_scaffold_1157_15
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria
|
Not on your lists |
comp(13313..14044)
|
Ribosomal RNA large subunit methyltransferase J {ECO:0000313|EMBL:EEC90205.1}; EC=2.1.1.- {ECO:0000313|EMBL:EEC90205.1};; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Ribosomal RNA large subunit methyltransferase J n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CAM4_9FIRM
hemolysin TlyA family protein
|
|
L3_072_000M1_scaffold_1157_16
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria
|
Not on your lists |
comp(14037..15899)
|
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CAM3_9FIRM
tktB; 1-deoxy-D-xylulose-5-phosphate synthase
|
|
L3_072_000M1_scaffold_1157_17
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria
|
Not on your lists |
comp(15988..16836)
|
Geranylgeranyl pyrophosphate synthase (EC:2.5.1.10)
Polyprenyl synthetase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CAM2_9FIRM
Polyprenyl synthetase {ECO:0000313|EMBL:EEC90203.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
|
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L3_072_000M1_scaffold_1157_18
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria
|
Not on your lists |
comp(16823..17032)
|
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
xseB; exodeoxyribonuclease VII, small subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 small subunit n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CAM1_9FIRM
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|
L3_072_000M1_scaffold_1157_19
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria
|
Not on your lists |
comp(17034..18353)
|
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
xseA; Exodeoxyribonuclease 7 large subunit XseA (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CAM0_9FIRM
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L3_072_000M1_scaffold_1157_20
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria
|
Not on your lists |
comp(18362..18739)
|
Transcription antitermination factor NusB n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CAL9_9FIRM
N utilization substance protein B homolog {ECO:0000256|SAAS:SAAS00057003}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
nusB; transcription antitermination factor NusB
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L3_072_000M1_scaffold_1157_21
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria
|
Not on your lists |
comp(18740..19636)
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5'-nucleotidase (EC:3.1.3.5)
5'-nucleotidase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CAL8_9FIRM
5'-nucleotidase {ECO:0000313|EMBL:EEC90199.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
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L3_072_000M1_scaffold_1157_22
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria
|
Not on your lists |
comp(19672..20001)
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Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CAL7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC90198.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Protein of unknown function (DUF322).
|
|
L3_072_000M1_scaffold_1157_23
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria
|
Not on your lists |
comp(20031..21017)
|
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
riboflavin kinase/FMN adenylyltransferase (EC:2.7.7.2 2.7.1.26)
Riboflavin biosynthesis protein RibF n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CAL6_9FIRM
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L3_072_000M1_scaffold_1157_24
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria
|
Not on your lists |
comp(21017..21841)
|
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
tRNA pseudouridine 55 synthase (EC:5.4.99.12)
tRNA pseudouridine synthase B n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CAL5_9FIRM
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L3_072_000M1_scaffold_1157_25
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria
|
Not on your lists |
22089..22541
|
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CAL4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC90195.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Predicted HD-superfamily hydrolase
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L3_072_000M1_scaffold_1157_26
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
22902..23195
|
Addiction module antitoxin, RelB/DinJ family n=1 Tax=Ruminococcus torques L2-14 RepID=D4M1G0_9FIRM
addiction module antitoxin, RelB/DinJ family
Addiction module antitoxin, RelB/DinJ family {ECO:0000313|EMBL:CBL25072.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
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L3_072_000M1_scaffold_1157_27
Roseburia sp. CAG:380, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
23185..23499
|
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:380 RepID=R6V6T3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC93953.1}; TaxID=1262946 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:380.;"
Plasmid stabilisation system protein.
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L3_072_000M1_scaffold_1157_28
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria
|
Not on your lists |
comp(23737..25473)
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Aspartate--tRNA ligase {ECO:0000313|EMBL:EEC90193.1}; EC=6.1.1.12 {ECO:0000313|EMBL:EEC90193.1};; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Aspartate--tRNA ligase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CAL2_9FIRM
aspartyl-tRNA synthetase
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L3_072_000M1_scaffold_1157_29
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria
|
Not on your lists |
comp(25476..26786)
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Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Histidine--tRNA ligase n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CAL1_9FIRM
hisS; histidyl-tRNA synthetase
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L3_072_000M1_scaffold_1157_30
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria
|
Not on your lists |
comp(27014..27748)
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Probable transcriptional regulatory protein EUBIFOR_01231 n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CAL0_9FIRM
Probable transcriptional regulatory protein EUBIFOR_01231 {ECO:0000256|HAMAP-Rule:MF_00693}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
hypothetical protein
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