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L3_072_000M1_scaffold_1957

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_072_000M1_scaffold_1957_1
Clostridium sp. CAG:510, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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195..1322
DNA (1128bp) protein (376aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:510 RepID=R6C6K5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA68749.1}; TaxID=1262816 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:510.;"
hypothetical protein
L3_072_000M1_scaffold_1957_2
Eubacterium sp. CAG:156, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1340..1843
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:156 RepID=R5YYJ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA29594.1}; TaxID=1262880 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:156.;"
L3_072_000M1_scaffold_1957_3
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(1783..2346)
DNA (564bp) protein (188aa)
Toxin-antitoxin system, antitoxin component, HicB family n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C7J2_9FIRM
Toxin-antitoxin system, antitoxin component, HicB family {ECO:0000313|EMBL:EEC91300.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Uncharacterised protein family (UPF0150).
L3_072_000M1_scaffold_1957_4
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(2437..5334)
DNA (2898bp) protein (966aa)
Beta-galactosidase {ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|SAAS:SAAS00046613};; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
Beta galactosidase small chain n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C7I7_9FIRM
beta-galactosidase
L3_072_000M1_scaffold_1957_5
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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5438..5575
DNA (138bp) protein (46aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C7I5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC91293.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
L3_072_000M1_scaffold_1957_6
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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5743..6828
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C938_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC90615.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
L3_072_000M1_scaffold_1957_7
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

6834..7307
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C937_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC90614.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
L3_072_000M1_scaffold_1957_8
unknown

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7323..7583
DNA (261bp) protein (87aa)

This feature has no annotations

L3_072_000M1_scaffold_1957_9
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

7589..8104
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C936_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC90613.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
L3_072_000M1_scaffold_1957_10
unknown

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8303..9274
DNA (972bp) protein (324aa)
Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3S3V2_TRIAD
L3_072_000M1_scaffold_1957_11
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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9362..10486
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C941_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC90618.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
L3_072_000M1_scaffold_1957_12
unknown

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10504..10920
DNA (417bp) protein (139aa)

This feature has no annotations

L3_072_000M1_scaffold_1957_13
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

10939..12264
DNA (1326bp) protein (442aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C942_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC90619.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
NERD domain-containing protein
L3_072_000M1_scaffold_1957_14
Coprococcus comes CAG:19, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12281..13048
DNA (768bp) protein (256aa)
Sigma-70 region 4 n=1 Tax=Coprococcus comes CAG:19 RepID=R6MGS9_9FIRM
Sigma-70 region 4 {ECO:0000313|EMBL:CDB85107.1}; TaxID=1263070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus; environmental samples.;" source="Coprococcus comes CAG:19.;"
RNA polymerase sigma factor, sigma-70 family
L3_072_000M1_scaffold_1957_15
unknown

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13187..13864
DNA (678bp) protein (226aa)

This feature has no annotations

L3_072_000M1_scaffold_1957_16
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

13907..14530
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C8Z0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC90761.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
L3_072_000M1_scaffold_1957_17
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

14645..15730
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7C938_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEC90615.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
L3_072_000M1_scaffold_1957_18
Holdemanella biformis, Holdemanella, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15855..19058
DNA (3204bp) protein (1068aa)
M protein repeat protein n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CDC6_9FIRM
M protein repeat protein {ECO:0000313|EMBL:EEC89251.1}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;"
HyaE
Displaying 18 items

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