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L3_072_000M1_scaffold_296_27

Organism: dasL3_072_000M1_metabat_metabat_24_fa_fa

near complete RP 46 / 55 MC: 1 BSCG 48 / 51 MC: 1 ASCG 12 / 38
Location: 22238..23467

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=1 Tax=Eubacterium biforme DSM 3989 RepID=B7CAE6_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 99.3
  • Coverage: 409.0
  • Bit_score: 794
  • Evalue 4.10e-227
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=518637 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemanella.;" source="Holdemanella biformis DSM 3989.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.3
  • Coverage: 409.0
  • Bit_score: 794
  • Evalue 5.70e-227
RNA polymerase, sigma 70 subunit, RpoD similarity KEGG
DB: KEGG
  • Identity: 84.5
  • Coverage: 367.0
  • Bit_score: 609
  • Evalue 5.30e-172

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Taxonomy

Holdemanella biformis → Holdemanella → Erysipelotrichales → Erysipelotrichia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1230
ATGGCAAATGAAACTCAAAAATTAAAGTTTACAAGCTTGGATGAGGCAAAAGAATTCTTGCTAAAGAGTAAGGAACAAAATACAGATGTTTCTCAAAAACAATTCTTAGATGCAGTCAGTGCTTTAAATTTAGATGATGACACATTGGACGATCTATATAACTGGATCGATGAAAATATGATTGAATTCATTGATGGGGATGAATTGGATGAAGATGATTTAAATGAGGATGATTTAAACGATGAAGATTTGGGCGAGGAAGATTCAATCGCAGAAGAAATTTCACAACTAGAAAAAACATTCGCGAATGCATCACATGCCAAAATTAATGACCCAGTTAAAATGTATTTAAAAGAAATCGGTCAAATTCCATTGTTGGATCCAAAAGAAGAGCCAATTATTGCGCGTCAGATTCAAGAAGGGGAACAGGCAAAAGAAGATATTAAAAACCCAGATTTAAGTGAGGAAGAAAAGAAAAAACTCGCAAAAATTATTGCGGATGGTGAAGAAGCGAAACAAACATTGATTTCTTCAAACCTTCGTTTAGTTGTATCGATTGCCAAAAAATATGTAGGTCGTGGAATGTTATTCTTGGATTTGATTCAAGAAGGAAATTGTGGTTTGATCAAAGCCGTTGAAAAATTTGATTACACAAAAGGATTTAAATTTTCAACATATGCGACATGGTGGATTCGTCAATCCATTACGCGTGCTATCGCAGACCAGGCTCGTACAATTCGTATTCCAGTACACATGGTTGAAACAATCAATAAATTAACACGTATTCAACGTCAATTGGTACAAGATCTAGGTCGTGATCCGATGCCAGAAGAAATCGCAGAAAAGATGGAAAATATTTCTGCCGAAAAGGTACGCGAAATTCAAAAGATTGCCTTAGATCCAGTGAGCCTTGAAACTCCAATTGGAGAAGAAGATGACTCTCACTTAGGAGATTTCATTGAGGATAAAGATACATTATCTCCAGATGATTATACAAACAATCAATTGTTGAAAGATGAAATCAATGCTGTTTTACAAGGACTTACGGAACGTGAAGAAAAAGTATTGCGCTTACGTTTTGGTTTATTAGACGGAAGAACTCGTACGCTAGAAGAAGTTGGTAAAGAATTCAATGTCACTCGTGAGCGTATTCGTCAAATTGAGGCGAAGGCATTGCGTAAGTTAAAGAATCCAAATCGCTGCAAACGCTTAAGAGACTTCGTAAAATAA
PROTEIN sequence
Length: 410
MANETQKLKFTSLDEAKEFLLKSKEQNTDVSQKQFLDAVSALNLDDDTLDDLYNWIDENMIEFIDGDELDEDDLNEDDLNDEDLGEEDSIAEEISQLEKTFANASHAKINDPVKMYLKEIGQIPLLDPKEEPIIARQIQEGEQAKEDIKNPDLSEEEKKKLAKIIADGEEAKQTLISSNLRLVVSIAKKYVGRGMLFLDLIQEGNCGLIKAVEKFDYTKGFKFSTYATWWIRQSITRAIADQARTIRIPVHMVETINKLTRIQRQLVQDLGRDPMPEEIAEKMENISAEKVREIQKIALDPVSLETPIGEEDDSHLGDFIEDKDTLSPDDYTNNQLLKDEINAVLQGLTEREEKVLRLRFGLLDGRTRTLEEVGKEFNVTRERIRQIEAKALRKLKNPNRCKRLRDFVK*